RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 SLC37A4O43826 429 aa24.22■■□□□ 1.47
CBWD3-202ENST00000377342 MYCLP12524 364 aaPredicted RBP24.22■■□□□ 1.47
CBWD3-202ENST00000377342 CYP2B6P20813 491 aa24.22■■□□□ 1.47
CBWD3-202ENST00000377342 CCND2P30279 289 aa24.22■■□□□ 1.47
CBWD3-202ENST00000377342 FLT3LGP49771 235 aa24.22■■□□□ 1.47
CBWD3-202ENST00000377342 PWP2Q15269 919 aaKnown RBP24.22■■□□□ 1.47
CBWD3-202ENST00000377342 ATP6V1DQ9Y5K8 247 aa24.22■■□□□ 1.47
CBWD3-202ENST00000377342 CLIC4Q9Y696 253 aa24.22■■□□□ 1.47
CBWD3-202ENST00000377342 DOCK5Q9H7D0 1870 aa24.21■■□□□ 1.47
CBWD3-202ENST00000377342 CYP3A7-CYP3A51PA0A087WV96 503 aa24.21■■□□□ 1.47
CBWD3-202ENST00000377342 FOXN1O15353 648 aa24.21■■□□□ 1.47
CBWD3-202ENST00000377342 CCNT1O60563 726 aaKnown RBP24.21■■□□□ 1.47
CBWD3-202ENST00000377342 IGHA2P01877 340 aa24.21■■□□□ 1.47
CBWD3-202ENST00000377342 ITGB5P18084 799 aa24.21■■□□□ 1.47
CBWD3-202ENST00000377342 CYP3A7P24462 503 aa24.21■■□□□ 1.47
CBWD3-202ENST00000377342 CCL14Q16627 93 aa24.21■■□□□ 1.47
CBWD3-202ENST00000377342 PPP4R3AQ6IN85 833 aa24.21■■□□□ 1.47
CBWD3-202ENST00000377342 MAMDC4Q6UXC1 1216 aa24.21■■□□□ 1.47
CBWD3-202ENST00000377342 SRRDQ9UH36 339 aa24.21■■□□□ 1.47
CBWD3-202ENST00000377342 UBIAD1Q9Y5Z9 338 aa24.21■■□□□ 1.47
CBWD3-202ENST00000377342 RGS20O76081 388 aa24.21■■□□□ 1.47
CBWD3-202ENST00000377342 HSPA8P11142 646 aaKnown RBP24.21■■□□□ 1.47
CBWD3-202ENST00000377342 ZNF174Q15697 407 aa24.21■■□□□ 1.47
CBWD3-202ENST00000377342 XRRA1Q6P2D8 792 aa24.21■■□□□ 1.47
CBWD3-202ENST00000377342 ARMCX2Q7L311 632 aa24.21■■□□□ 1.47
CBWD3-202ENST00000377342 TFIP11Q9UBB9 837 aaKnown RBP24.21■■□□□ 1.47
CBWD3-202ENST00000377342 GCFC2P16383 781 aaKnown RBP24.2■■□□□ 1.46
CBWD3-202ENST00000377342 MCM7P33993 719 aa24.2■■□□□ 1.46
CBWD3-202ENST00000377342 SF3A1Q15459 793 aaKnown RBP24.2■■□□□ 1.46
CBWD3-202ENST00000377342 CEP55Q53EZ4 464 aa24.2■■□□□ 1.46
CBWD3-202ENST00000377342 ANO1Q5XXA6 986 aa24.2■■□□□ 1.46
CBWD3-202ENST00000377342 POTEDQ86YR6 584 aa24.2■■□□□ 1.46
CBWD3-202ENST00000377342 INPP4AQ96PE3 977 aaPredicted RBP24.2■■□□□ 1.46
CBWD3-202ENST00000377342 POLR3EQ9NVU0 708 aa24.2■■□□□ 1.46
CBWD3-202ENST00000377342 SLC5A4Q9NY91 659 aa24.2■■□□□ 1.46
CBWD3-202ENST00000377342 ASB14A6NK59 587 aa24.19■■□□□ 1.46
CBWD3-202ENST00000377342 GNRH1P01148 92 aa24.19■■□□□ 1.46
CBWD3-202ENST00000377342 HSPA1AP0DMV8 641 aaKnown RBP24.19■■□□□ 1.46
CBWD3-202ENST00000377342 HSPA1BP0DMV9 641 aaKnown RBP24.19■■□□□ 1.46
CBWD3-202ENST00000377342 XRCC5P13010 732 aaKnown RBP24.19■■□□□ 1.46
CBWD3-202ENST00000377342 NASPP49321 788 aaPredicted RBP24.19■■□□□ 1.46
CBWD3-202ENST00000377342 CEBPZQ03701 1054 aaKnown RBP24.19■■□□□ 1.46
CBWD3-202ENST00000377342 PDE4DQ08499 809 aa24.19■■□□□ 1.46
CBWD3-202ENST00000377342 PTPAQ15257 358 aa24.19■■□□□ 1.46
CBWD3-202ENST00000377342 ZNF396Q96N95 335 aaPredicted RBP24.19■■□□□ 1.46
CBWD3-202ENST00000377342 MXRA8Q9BRK3 442 aa24.19■■□□□ 1.46
CBWD3-202ENST00000377342 TINF2Q9BSI4 451 aa24.19■■□□□ 1.46
CBWD3-202ENST00000377342 KATNBL1Q9H079 304 aa24.19■■□□□ 1.46
CBWD3-202ENST00000377342 RTEL1Q9NZ71 1219 aa24.19■■□□□ 1.46
CBWD3-202ENST00000377342 DDX25Q9UHL0 483 aaKnown RBP24.19■■□□□ 1.46
CBWD3-202ENST00000377342 CENPFP49454 3210 aa24.18■■□□□ 1.46
CBWD3-202ENST00000377342 ORC2Q13416 577 aaPredicted RBP24.18■■□□□ 1.46
CBWD3-202ENST00000377342 STXBP2Q15833 593 aa24.18■■□□□ 1.46
CBWD3-202ENST00000377342 Q4G0T1 1027 aa24.18■■□□□ 1.46
CBWD3-202ENST00000377342 PRR16Q569H4 304 aa24.18■■□□□ 1.46
CBWD3-202ENST00000377342 OLFML2BQ68BL8 750 aa24.18■■□□□ 1.46
CBWD3-202ENST00000377342 C4orf32Q8N8J7 132 aa24.18■■□□□ 1.46
CBWD3-202ENST00000377342 TMEM60Q9H2L4 133 aa24.18■■□□□ 1.46
CBWD3-202ENST00000377342 CNPY2Q9Y2B0 182 aa24.18■■□□□ 1.46
CBWD3-202ENST00000377342 MRVI1Q9Y6F6 885 aa24.18■■□□□ 1.46
CBWD3-202ENST00000377342 SYNGAP1Q96PV0 1343 aa24.18■■□□□ 1.46
CBWD3-202ENST00000377342 MEIS1O00470 390 aa24.18■■□□□ 1.46
CBWD3-202ENST00000377342 NEMFO60524 1076 aa24.18■■□□□ 1.46
CBWD3-202ENST00000377342 SNAI1O95863 264 aaPredicted RBP24.18■■□□□ 1.46
CBWD3-202ENST00000377342 ZNF76P36508 570 aa24.18■■□□□ 1.46
CBWD3-202ENST00000377342 SEMA3FQ13275 785 aa24.18■■□□□ 1.46
CBWD3-202ENST00000377342 ATL3Q6DD88 541 aa24.18■■□□□ 1.46
CBWD3-202ENST00000377342 MSL3Q8N5Y2 521 aaKnown RBP24.18■■□□□ 1.46
CBWD3-202ENST00000377342 TRIB2Q92519 343 aa24.18■■□□□ 1.46
CBWD3-202ENST00000377342 NAP1L4Q99733 375 aaKnown RBP24.18■■□□□ 1.46
CBWD3-202ENST00000377342 WDR11Q9BZH6 1224 aa24.18■■□□□ 1.46
CBWD3-202ENST00000377342 EIF3JO75822 258 aaKnown RBP24.17■■□□□ 1.46
CBWD3-202ENST00000377342 STAM2O75886 525 aa24.17■■□□□ 1.46
CBWD3-202ENST00000377342 KRT85P78386 507 aa24.17■■□□□ 1.46
CBWD3-202ENST00000377342 IRF5Q13568 498 aa24.17■■□□□ 1.46
CBWD3-202ENST00000377342 EEPD1Q7L9B9 569 aa24.17■■□□□ 1.46
CBWD3-202ENST00000377342 OTOP1Q7RTM1 612 aa24.17■■□□□ 1.46
CBWD3-202ENST00000377342 NIPA1Q7RTP0 329 aa24.17■■□□□ 1.46
CBWD3-202ENST00000377342 FBXO16Q8IX29 292 aaPredicted RBP24.17■■□□□ 1.46
CBWD3-202ENST00000377342 MPHOSPH6Q99547 160 aaKnown RBP24.17■■□□□ 1.46
CBWD3-202ENST00000377342 JADE2Q9NQC1 790 aa24.17■■□□□ 1.46
CBWD3-202ENST00000377342 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.17■■□□□ 1.46
CBWD3-202ENST00000377342 B4DLN1 442 aa24.16■■□□□ 1.46
CBWD3-202ENST00000377342 BAG4O95429 457 aaKnown RBP24.16■■□□□ 1.46
CBWD3-202ENST00000377342 CLEC17AQ6ZS10 378 aa24.16■■□□□ 1.46
CBWD3-202ENST00000377342 ETNPPLQ8TBG4 499 aa24.16■■□□□ 1.46
CBWD3-202ENST00000377342 KCNMB3Q9NPA1 279 aa24.16■■□□□ 1.46
CBWD3-202ENST00000377342 ARP10275 920 aa24.15■■□□□ 1.46
CBWD3-202ENST00000377342 NCLP19338 710 aaKnown RBP24.15■■□□□ 1.46
CBWD3-202ENST00000377342 HOXD10P28358 340 aa24.15■■□□□ 1.46
CBWD3-202ENST00000377342 ATP2C1P98194 919 aaPredicted RBP24.15■■□□□ 1.46
CBWD3-202ENST00000377342 SETQ01105 290 aaPredicted RBP24.15■■□□□ 1.46
CBWD3-202ENST00000377342 PTGDRQ13258 359 aa24.15■■□□□ 1.46
CBWD3-202ENST00000377342 PLA2G4DQ86XP0 818 aa24.15■■□□□ 1.46
CBWD3-202ENST00000377342 LINC00301Q8NCQ3 95 aa24.15■■□□□ 1.46
CBWD3-202ENST00000377342 MSH4O15457 936 aa24.15■■□□□ 1.46
CBWD3-202ENST00000377342 FIBPO43427 364 aa24.15■■□□□ 1.46
CBWD3-202ENST00000377342 YEATS4O95619 227 aa24.15■■□□□ 1.46
CBWD3-202ENST00000377342 CYP2C19P33261 490 aa24.15■■□□□ 1.46
CBWD3-202ENST00000377342 MTMR1Q13613 665 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms