RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 ZBTB33Q86T24 672 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 FAM83AQ86UY5 434 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 GBP3Q9H0R5 595 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 LRFN2Q9ULH4 789 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 CEP83Q9Y592 693 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 LPXNO60711 386 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 ZSCAN20P17040 1043 aaPredicted RBP9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 TAL1P17542 331 aaPredicted RBP9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 CMA1P23946 247 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 KRT9P35527 623 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 GNASQ5JWF2 1037 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 CYFIP1Q7L576 1253 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 C7orf31Q8N865 590 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 CCDC42Q96M95 316 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 PCIF1Q9H4Z3 704 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 KMT5AQ9NQR1 393 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 DISC1Q9NRI5 854 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 GABBR1Q9UBS5 961 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 KCNH4Q9UQ05 1017 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 GGPS1O95749 300 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 FDX1P10109 184 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 YARSP54577 528 aaKnown RBP9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 AP3B2Q13367 1082 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 DEFB115Q30KQ5 88 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 LRP10Q7Z4F1 713 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 PROCA1Q8NCQ7 364 aaPredicted RBP9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 NACA2Q9H009 215 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 NLRC4Q9NPP4 1024 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 RGS17Q9UGC6 210 aaPredicted RBP9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 LUC7L2Q9Y383 392 aaKnown RBP9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 PCDHA5Q9Y5H7 936 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 SLIT3O75094 1523 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 ZNF541Q9H0D2 1346 aa9.37□□□□□ -0.91
CRNKL1-202ENST00000377340 KIF5CO60282 957 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 URI1O94763 535 aaPredicted RBP9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 RPS6P62753 249 aaKnown RBP9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 RASGRP2Q7LDG7 609 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 CATSPER4Q7RTX7 472 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 CLSTN2Q9H4D0 955 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 ST7Q9NRC1 585 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 FAM205CA6NFA0 338 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 CLIC2O15247 247 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 VCAM1P19320 739 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 EXOSC10Q01780 885 aaKnown RBP9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 NEDD9Q14511 834 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 JAKMIP2Q96AA8 810 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 ZSWIM4Q9H7M6 989 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 INPP5FQ9Y2H2 1132 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.36□□□□□ -0.912e-6■■■□□ 15.9
CRNKL1-202ENST00000377340 SYNRGQ9UMZ2 1314 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 XRN1Q8IZH2 1706 aaKnown RBP9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 ASB14A6NK59 587 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 YDJCA8MPS7 323 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 PDHXO00330 501 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 IRF6O14896 467 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 PLCG1P19174 1290 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 PEX3P56589 373 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 TFDP1Q14186 410 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 CEP55Q53EZ4 464 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 CHADLQ6NUI6 762 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 MLKLQ8NB16 471 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 CLMNQ96JQ2 1002 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 JMJD4Q9H9V9 463 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 FAM207AQ9NSI2 230 aaPredicted RBP9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 KCNG1Q9UIX4 513 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 TSKSQ9UJT2 592 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 PP2D1A8MPX8 630 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 STX10O60499 249 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 TMEM191BP0C7N4 346 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 NT5C2P49902 561 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 SLC8A3P57103 927 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 CUL4AQ13619 759 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 VGLL4Q14135 290 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 KRBA2Q6ZNG9 492 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 POTEDQ86YR6 584 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 THNSL1Q8IYQ7 743 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 LINC00301Q8NCQ3 95 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 MICAL1Q8TDZ2 1067 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 C16orf45Q96MC5 204 aaPredicted RBP9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 IWS1Q96ST2 819 aa9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 JPH2Q9BR39 696 aaPredicted RBP9.36□□□□□ -0.91
CRNKL1-202ENST00000377340 ASTN2O75129 1339 aaPredicted RBP9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 IFT172Q9UG01 1749 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 WDR64B1ANS9 1081 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 K7ERI5 159 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 ZSCAN12O43309 604 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 CTSHP09668 335 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 SMC1BQ8NDV3 1235 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 CCDC102AQ96A19 550 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 CASP1P29466 404 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 PTPN14Q15678 1187 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 KIAA1841Q6NSI8 718 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 LMBRD1Q9NUN5 540 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 KIAA1468Q9P260 1216 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 FAM198AQ9UFP1 575 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 RFX7Q2KHR2 1363 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 NFKBIEO00221 500 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 PLA2G4BP0C869 781 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 ADAM9Q13443 819 aa9.35□□□□□ -0.91
CRNKL1-202ENST00000377340 PPP2R5AQ15172 486 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms