RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 CALM3P0DP25 149 aa17.13■□□□□ 0.33
FXN-201ENST00000377270 MYBL1P10243 752 aa17.13■□□□□ 0.33
FXN-201ENST00000377270 TMEM110Q86TL2 294 aa17.13■□□□□ 0.33
FXN-201ENST00000377270 TBC1D31Q96DN5 1066 aa17.13■□□□□ 0.33
FXN-201ENST00000377270 ADGRG1Q9Y653 693 aa17.13■□□□□ 0.33
FXN-201ENST00000377270 FAM205CA6NFA0 338 aa17.12■□□□□ 0.33
FXN-201ENST00000377270 SMAPO00193 183 aa17.12■□□□□ 0.33
FXN-201ENST00000377270 POLR2DO15514 142 aaKnown RBP17.12■□□□□ 0.33
FXN-201ENST00000377270 SLC4A8Q2Y0W8 1093 aa17.12■□□□□ 0.33
FXN-201ENST00000377270 ZNF280DQ6N043 979 aa17.12■□□□□ 0.33
FXN-201ENST00000377270 DZIP1Q86YF9 867 aaKnown RBP17.12■□□□□ 0.33
FXN-201ENST00000377270 GALNT15Q8N3T1 639 aa17.12■□□□□ 0.33
FXN-201ENST00000377270 STAMBPL1Q96FJ0 436 aa17.12■□□□□ 0.33
FXN-201ENST00000377270 NUP58Q9BVL2 599 aa17.12■□□□□ 0.33
FXN-201ENST00000377270 HDAC6Q9UBN7 1215 aa17.12■□□□□ 0.33
FXN-201ENST00000377270 SOWAHDA6NJG2 315 aa17.12■□□□□ 0.33
FXN-201ENST00000377270 ORC4O43929 436 aa17.12■□□□□ 0.33
FXN-201ENST00000377270 BUB1BO60566 1050 aaPredicted RBP17.12■□□□□ 0.33
FXN-201ENST00000377270 SMIM24O75264 130 aa17.12■□□□□ 0.33
FXN-201ENST00000377270 KRT2P35908 639 aa17.12■□□□□ 0.33
FXN-201ENST00000377270 PRPF4BQ13523 1007 aaKnown RBP17.12■□□□□ 0.33
FXN-201ENST00000377270 ELOA2Q8IYF1 753 aaPredicted RBP17.12■□□□□ 0.33
FXN-201ENST00000377270 PHF20Q9BVI0 1012 aa17.12■□□□□ 0.33
FXN-201ENST00000377270 HOOK1Q9UJC3 728 aaKnown RBP17.12■□□□□ 0.33
FXN-201ENST00000377270 SRPRBQ9Y5M8 271 aaKnown RBP17.12■□□□□ 0.33
FXN-201ENST00000377270 BTAF1O14981 1849 aa17.12■□□□□ 0.33
FXN-201ENST00000377270 GOLGA6L10A6NI86 522 aa17.11■□□□□ 0.33
FXN-201ENST00000377270 MDM2Q00987 491 aaPredicted RBP17.11■□□□□ 0.33
FXN-201ENST00000377270 TRAPPC3LQ5T215 181 aa17.11■□□□□ 0.33
FXN-201ENST00000377270 SLC51AQ86UW1 340 aa17.11■□□□□ 0.33
FXN-201ENST00000377270 HPCAL4Q9UM19 191 aa17.11■□□□□ 0.33
FXN-201ENST00000377270 DDAH1O94760 285 aa17.11■□□□□ 0.33
FXN-201ENST00000377270 SLC7A5Q01650 507 aa17.11■□□□□ 0.33
FXN-201ENST00000377270 EARS2Q5JPH6 523 aaKnown RBP17.11■□□□□ 0.33
FXN-201ENST00000377270 ZNF579Q8NAF0 562 aaKnown RBP17.11■□□□□ 0.33
FXN-201ENST00000377270 ZFAND2BQ8WV99 257 aa17.11■□□□□ 0.33
FXN-201ENST00000377270 PANX2Q96RD6 677 aa17.11■□□□□ 0.33
FXN-201ENST00000377270 MCM9Q9NXL9 1143 aa17.11■□□□□ 0.33
FXN-201ENST00000377270 ARPP21Q9UBL0 812 aaPredicted RBP17.11■□□□□ 0.33
FXN-201ENST00000377270 SERTAD1Q9UHV2 236 aa17.11■□□□□ 0.33
FXN-201ENST00000377270 TRIM75PA6NK02 468 aa17.1■□□□□ 0.33
FXN-201ENST00000377270 C16orf87Q6PH81 154 aa17.1■□□□□ 0.33
FXN-201ENST00000377270 TMTC3Q6ZXV5 915 aa17.1■□□□□ 0.33
FXN-201ENST00000377270 CSRNP2Q9H175 543 aa17.1■□□□□ 0.33
FXN-201ENST00000377270 HAUS2Q9NVX0 235 aa17.1■□□□□ 0.33
FXN-201ENST00000377270 TMEM98Q9Y2Y6 226 aa17.1■□□□□ 0.33
FXN-201ENST00000377270 MYH13Q9UKX3 1938 aa17.1■□□□□ 0.33
FXN-201ENST00000377270 MYH6P13533 1939 aa17.1■□□□□ 0.33
FXN-201ENST00000377270 GOLGA6L7A0A1B0GV03 622 aa17.1■□□□□ 0.33
FXN-201ENST00000377270 TSPY2A6NKD2 308 aa17.1■□□□□ 0.33
FXN-201ENST00000377270 TFRCP02786 760 aaKnown RBP17.1■□□□□ 0.33
FXN-201ENST00000377270 PDE4BQ07343 736 aa17.1■□□□□ 0.33
FXN-201ENST00000377270 POSTNQ15063 836 aa17.1■□□□□ 0.33
FXN-201ENST00000377270 Q4G0T1 1027 aa17.1■□□□□ 0.33
FXN-201ENST00000377270 SBK1Q52WX2 424 aa17.1■□□□□ 0.33
FXN-201ENST00000377270 PPP1R15BQ5SWA1 713 aa17.1■□□□□ 0.33
FXN-201ENST00000377270 USP49Q70CQ1 688 aa17.1■□□□□ 0.33
FXN-201ENST00000377270 NOA1Q8NC60 698 aaKnown RBP17.1■□□□□ 0.33
FXN-201ENST00000377270 EBF2Q9HAK2 575 aa17.1■□□□□ 0.33
FXN-201ENST00000377270 TBC1D7Q9P0N9 293 aa17.1■□□□□ 0.33
FXN-201ENST00000377270 A0A0U1RQJ8 604 aa17.09■□□□□ 0.33
FXN-201ENST00000377270 AKR1B15C9JRZ8 316 aaPredicted RBP17.09■□□□□ 0.33
FXN-201ENST00000377270 USP17L8P0C7I0 530 aa17.09■□□□□ 0.33
FXN-201ENST00000377270 GGCXP38435 758 aa17.09■□□□□ 0.33
FXN-201ENST00000377270 HSP90AA4PQ58FG1 418 aa17.09■□□□□ 0.33
FXN-201ENST00000377270 RAD9BQ6WBX8 426 aa17.09■□□□□ 0.33
FXN-201ENST00000377270 SRBD1Q8N5C6 995 aaKnown RBP17.09■□□□□ 0.33
FXN-201ENST00000377270 ATRIPQ8WXE1 791 aa17.09■□□□□ 0.33
FXN-201ENST00000377270 NAPGQ99747 312 aaPredicted RBP17.09■□□□□ 0.33
FXN-201ENST00000377270 NAA15Q9BXJ9 866 aaKnown RBP17.09■□□□□ 0.33
FXN-201ENST00000377270 COL24A1Q17RW2 1714 aa17.09■□□□□ 0.33
FXN-201ENST00000377270 IRS2Q9Y4H2 1338 aa17.09■□□□□ 0.33
FXN-201ENST00000377270 ATP4AP20648 1035 aa17.09■□□□□ 0.33
FXN-201ENST00000377270 BMP6P22004 513 aa17.09■□□□□ 0.33
FXN-201ENST00000377270 NFIXQ14938 502 aa17.09■□□□□ 0.33
FXN-201ENST00000377270 FAM196AQ6ZSG2 479 aa17.09■□□□□ 0.33
FXN-201ENST00000377270 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.09■□□□□ 0.33
FXN-201ENST00000377270 SLC35F6Q8N357 371 aa17.09■□□□□ 0.33
FXN-201ENST00000377270 CCDC148Q8NFR7 591 aa17.09■□□□□ 0.33
FXN-201ENST00000377270 ZNF510Q9Y2H8 683 aa17.09■□□□□ 0.33
FXN-201ENST00000377270 C15orf41Q9Y2V0 281 aa17.09■□□□□ 0.33
FXN-201ENST00000377270 ZC3H4Q9UPT8 1303 aaKnown RBP17.08■□□□□ 0.33
FXN-201ENST00000377270 OPLAHO14841 1288 aa17.08■□□□□ 0.33
FXN-201ENST00000377270 LDHBP07195 334 aaKnown RBP17.08■□□□□ 0.33
FXN-201ENST00000377270 STIM1Q13586 685 aa17.08■□□□□ 0.33
FXN-201ENST00000377270 GRAPQ13588 217 aa17.08■□□□□ 0.33
FXN-201ENST00000377270 GALNT17Q6IS24 598 aa17.08■□□□□ 0.33
FXN-201ENST00000377270 GRAMD1CQ8IYS0 662 aa17.08■□□□□ 0.33
FXN-201ENST00000377270 CCDC170Q8IYT3 715 aa17.08■□□□□ 0.33
FXN-201ENST00000377270 GRAPLQ8TC17 118 aaPredicted RBP17.08■□□□□ 0.33
FXN-201ENST00000377270 FAM81BQ96LP2 452 aa17.08■□□□□ 0.33
FXN-201ENST00000377270 A6NHS1 94 aa17.08■□□□□ 0.32
FXN-201ENST00000377270 MCM3P25205 808 aa17.08■□□□□ 0.32
FXN-201ENST00000377270 CTCFP49711 727 aaPredicted RBP17.08■□□□□ 0.32
FXN-201ENST00000377270 INHBCP55103 352 aa17.08■□□□□ 0.32
FXN-201ENST00000377270 KCNN1Q92952 543 aa17.08■□□□□ 0.32
FXN-201ENST00000377270 MAN1B1Q9UKM7 699 aa17.08■□□□□ 0.32
FXN-201ENST00000377270 CNTNAP5Q8WYK1 1306 aa17.07■□□□□ 0.32
FXN-201ENST00000377270 IPO5O00410 1097 aaKnown RBP17.07■□□□□ 0.32
FXN-201ENST00000377270 UPP2O95045 317 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms