RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 DCAF8Q5TAQ9 597 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 USP40Q9NVE5 1235 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 DDX25Q9UHL0 483 aaKnown RBP18.06■□□□□ 0.48
TRIM27-202ENST00000377199 UBAP1LF5GYI3 381 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 TOM1O60784 492 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 EIF3JO75822 258 aaKnown RBP18.06■□□□□ 0.48
TRIM27-202ENST00000377199 IL1R1P14778 569 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 TUBB2AQ13885 445 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 MEA1Q16626 185 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 RIN2Q8WYP3 895 aaPredicted RBP18.06■□□□□ 0.48
TRIM27-202ENST00000377199 MTMR9Q96QG7 549 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 TUBB2BQ9BVA1 445 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 FGFBP2Q9BYJ0 223 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 JMJD4Q9H9V9 463 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 MAGEF1Q9HAY2 307 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 ARHGAP20Q9P2F6 1191 aa18.06■□□□□ 0.48
TRIM27-202ENST00000377199 FAM170AA1A519 330 aa18.05■□□□□ 0.48
TRIM27-202ENST00000377199 TRAF5O00463 557 aa18.05■□□□□ 0.48
TRIM27-202ENST00000377199 BUB1O43683 1085 aa18.05■□□□□ 0.48
TRIM27-202ENST00000377199 EDIL3O43854 480 aa18.05■□□□□ 0.48
TRIM27-202ENST00000377199 TMC4Q7Z404 712 aa18.05■□□□□ 0.48
TRIM27-202ENST00000377199 RIOX1Q9H6W3 641 aa18.05■□□□□ 0.48
TRIM27-202ENST00000377199 NAV1Q8NEY1 1877 aa18.05■□□□□ 0.48
TRIM27-202ENST00000377199 E9PMD0 336 aa18.05■□□□□ 0.48
TRIM27-202ENST00000377199 TAL1P17542 331 aaPredicted RBP18.05■□□□□ 0.48
TRIM27-202ENST00000377199 CCDC40Q4G0X9 1142 aa18.05■□□□□ 0.48
TRIM27-202ENST00000377199 UNC13DQ70J99 1090 aa18.05■□□□□ 0.48
TRIM27-202ENST00000377199 SLF2Q8IX21 1173 aa18.05■□□□□ 0.48
TRIM27-202ENST00000377199 RAB34Q9BZG1 259 aa18.05■□□□□ 0.48
TRIM27-202ENST00000377199 NCK2O43639 380 aa18.04■□□□□ 0.48
TRIM27-202ENST00000377199 KIF11P52732 1056 aa18.04■□□□□ 0.48
TRIM27-202ENST00000377199 CENPPQ6IPU0 288 aa18.04■□□□□ 0.48
TRIM27-202ENST00000377199 HNRNPLLQ8WVV9 542 aaKnown RBP18.04■□□□□ 0.48
TRIM27-202ENST00000377199 RAD54LQ92698 747 aa18.04■□□□□ 0.48
TRIM27-202ENST00000377199 SERPINB13Q9UIV8 391 aa18.04■□□□□ 0.48
TRIM27-202ENST00000377199 EIF3CLB5ME19 914 aaKnown RBP18.04■□□□□ 0.48
TRIM27-202ENST00000377199 GFPT1Q06210 699 aaPredicted RBP18.04■□□□□ 0.48
TRIM27-202ENST00000377199 EIF3CQ99613 913 aaKnown RBP18.04■□□□□ 0.48
TRIM27-202ENST00000377199 ZNF219Q9P2Y4 722 aaPredicted RBP18.04■□□□□ 0.48
TRIM27-202ENST00000377199 PCDHAC2Q9Y5I4 1007 aa18.04■□□□□ 0.48
TRIM27-202ENST00000377199 MAST2Q6P0Q8 1798 aa18.04■□□□□ 0.48
TRIM27-202ENST00000377199 STAT3P40763 770 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 NFIAQ12857 509 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 CERS5Q8N5B7 392 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 KIAA1024Q9UPX6 916 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 BTAF1O14981 1849 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 DDX60LQ5H9U9 1706 aaKnown RBP18.03■□□□□ 0.48
TRIM27-202ENST00000377199 TTLL1O95922 423 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 VAV2P52735 878 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 EZH2Q15910 746 aaKnown RBP18.03■□□□□ 0.48
TRIM27-202ENST00000377199 ZSCAN29Q8IWY8 852 aaPredicted RBP18.03■□□□□ 0.48
TRIM27-202ENST00000377199 COG1Q8WTW3 980 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 PCDHA12Q9UN75 941 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 PCDHA13Q9Y5I0 950 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 A0A0U1RQG5 324 aaPredicted RBP18.03■□□□□ 0.48
TRIM27-202ENST00000377199 KRT18P05783 430 aaKnown RBP18.03■□□□□ 0.48
TRIM27-202ENST00000377199 MYBL2P10244 700 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 CAPN2P17655 700 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 RBM5P52756 815 aaKnown RBP eCLIP18.03■□□□□ 0.48
TRIM27-202ENST00000377199 USP14P54578 494 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 SLC7A5Q01650 507 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 RASSF7Q02833 373 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 MEX3CQ5U5Q3 659 aaKnown RBP18.03■□□□□ 0.48
TRIM27-202ENST00000377199 NFRKBQ6P4R8 1299 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 ZFPM1Q8IX07 1006 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 RETREG2Q8NC44 543 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 EHBP1Q8NDI1 1231 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 ERGIC2Q96RQ1 377 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 ZC3H12CQ9C0D7 883 aaKnown RBP18.03■□□□□ 0.48
TRIM27-202ENST00000377199 GBP3Q9H0R5 595 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 PSTPIP2Q9H939 334 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 CALCOCO1Q9P1Z2 691 aa18.03■□□□□ 0.48
TRIM27-202ENST00000377199 POTEB3A0JP26 581 aa18.02■□□□□ 0.48
TRIM27-202ENST00000377199 POTECB2RU33 542 aa18.02■□□□□ 0.48
TRIM27-202ENST00000377199 MAN2A1Q16706 1144 aa18.02■□□□□ 0.48
TRIM27-202ENST00000377199 ASPRV1Q53RT3 343 aa18.02■□□□□ 0.48
TRIM27-202ENST00000377199 POTEBQ6S5H4 581 aa18.02■□□□□ 0.48
TRIM27-202ENST00000377199 CCDC170Q8IYT3 715 aa18.02■□□□□ 0.48
TRIM27-202ENST00000377199 TBC1D22AQ8WUA7 517 aa18.02■□□□□ 0.48
TRIM27-202ENST00000377199 SBF2Q86WG5 1849 aa18.02■□□□□ 0.48
TRIM27-202ENST00000377199 USO1O60763 962 aaKnown RBP18.02■□□□□ 0.47
TRIM27-202ENST00000377199 DDR1Q08345 913 aa18.02■□□□□ 0.47
TRIM27-202ENST00000377199 ZNF543Q08ER8 600 aa18.02■□□□□ 0.47
TRIM27-202ENST00000377199 IKQ13123 557 aaPredicted RBP18.02■□□□□ 0.47
TRIM27-202ENST00000377199 CUL5Q93034 780 aa18.02■□□□□ 0.47
TRIM27-202ENST00000377199 KCNQ5Q9NR82 932 aa18.02■□□□□ 0.47
TRIM27-202ENST00000377199 ZSCAN26Q16670 478 aa18.01■□□□□ 0.47
TRIM27-202ENST00000377199 PTPROQ16827 1216 aa18.01■□□□□ 0.47
TRIM27-202ENST00000377199 TXLNBQ8N3L3 684 aa18.01■□□□□ 0.47
TRIM27-202ENST00000377199 HDAC7Q8WUI4 952 aa18.01■□□□□ 0.47
TRIM27-202ENST00000377199 HAS1Q92839 578 aa18.01■□□□□ 0.47
TRIM27-202ENST00000377199 PANK4Q9NVE7 773 aa18.01■□□□□ 0.47
TRIM27-202ENST00000377199 STK17AQ9UEE5 414 aa18.01■□□□□ 0.47
TRIM27-202ENST00000377199 SIK3Q9Y2K2 1263 aa18.01■□□□□ 0.47
TRIM27-202ENST00000377199 MEIS1O00470 390 aa18.01■□□□□ 0.47
TRIM27-202ENST00000377199 FXR2P51116 673 aaKnown RBP eCLIP18.01■□□□□ 0.474e-8■■■■□ 25.7
TRIM27-202ENST00000377199 RNASE9P60153 205 aaKnown RBP18.01■□□□□ 0.47
TRIM27-202ENST00000377199 COASYQ13057 564 aa18.01■□□□□ 0.47
TRIM27-202ENST00000377199 KCTD19Q17RG1 926 aaPredicted RBP18.01■□□□□ 0.47
TRIM27-202ENST00000377199 HERC4Q5GLZ8 1057 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms