RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 ZNF396Q96N95 335 aaPredicted RBP14.12□□□□□ -0.15
VRK3-202ENST00000377011 RIOX1Q9H6W3 641 aa14.12□□□□□ -0.15
VRK3-202ENST00000377011 RCOR1Q9UKL0 485 aa14.12□□□□□ -0.15
VRK3-202ENST00000377011 ERICH2A1L162 156 aa14.12□□□□□ -0.15
VRK3-202ENST00000377011 PTPDC1A2A3K4 754 aa14.12□□□□□ -0.15
VRK3-202ENST00000377011 PGK1P00558 417 aa14.12□□□□□ -0.15
VRK3-202ENST00000377011 COL6A1P12109 1028 aa14.12□□□□□ -0.15
VRK3-202ENST00000377011 KIAA1524Q8TCG1 905 aa14.12□□□□□ -0.15
VRK3-202ENST00000377011 BICD2Q8TD16 824 aa14.12□□□□□ -0.15
VRK3-202ENST00000377011 PGBD1Q96JS3 809 aa14.12□□□□□ -0.15
VRK3-202ENST00000377011 SLC5A4Q9NY91 659 aa14.12□□□□□ -0.15
VRK3-202ENST00000377011 ZHX1Q9UKY1 873 aaPredicted RBP14.12□□□□□ -0.15
VRK3-202ENST00000377011 MYCNP04198 464 aaPredicted RBP14.11□□□□□ -0.15
VRK3-202ENST00000377011 CDC25BP30305 580 aa14.11□□□□□ -0.15
VRK3-202ENST00000377011 FAM173BQ6P4H8 233 aa14.11□□□□□ -0.15
VRK3-202ENST00000377011 CATIPQ7Z7H3 387 aa14.11□□□□□ -0.15
VRK3-202ENST00000377011 FBXO16Q8IX29 292 aaPredicted RBP14.11□□□□□ -0.15
VRK3-202ENST00000377011 CCDC82Q8N4S0 544 aa14.11□□□□□ -0.15
VRK3-202ENST00000377011 TMEM87BQ96K49 555 aa14.11□□□□□ -0.15
VRK3-202ENST00000377011 SYNGAP1Q96PV0 1343 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 RBAK-RBAKDNI3L0D1 243 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 AP5Z1O43299 807 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 LIFRP42702 1097 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 ACVR2BQ13705 512 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 SART3Q15020 963 aaKnown RBP14.1□□□□□ -0.15
VRK3-202ENST00000377011 NFXL1Q6ZNB6 911 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 RNF207Q6ZRF8 634 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 ZNF467Q7Z7K2 595 aaPredicted RBP14.1□□□□□ -0.15
VRK3-202ENST00000377011 MICU3Q86XE3 530 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 FBXO11Q86XK2 927 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 TAAR1Q96RJ0 339 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 TTC12Q9H892 705 aaPredicted RBP14.1□□□□□ -0.15
VRK3-202ENST00000377011 CBX8Q9HC52 389 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 FAM217BQ9NTX9 383 aaPredicted RBP14.1□□□□□ -0.15
VRK3-202ENST00000377011 FAM13BQ9NYF5 915 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 TFIP11Q9UBB9 837 aaKnown RBP14.1□□□□□ -0.15
VRK3-202ENST00000377011 ZBTB5O15062 677 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 DTNBO60941 627 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 ADD1P35611 737 aaKnown RBP14.1□□□□□ -0.15
VRK3-202ENST00000377011 ADCYAP1R1P41586 468 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 ALDH5A1P51649 535 aaPredicted RBP14.1□□□□□ -0.15
VRK3-202ENST00000377011 CCDC144BQ3MJ40 725 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 ANO6Q4KMQ2 910 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 TAPT1Q6NXT6 567 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 APOA5Q6Q788 366 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 SGMS1Q86VZ5 419 aa14.1□□□□□ -0.15
VRK3-202ENST00000377011 SYTL5Q8TDW5 730 aaPredicted RBP14.1□□□□□ -0.15
VRK3-202ENST00000377011 ZFP91Q96JP5 570 aaPredicted RBP14.1□□□□□ -0.15
VRK3-202ENST00000377011 CCDC69A6NI79 296 aa14.09□□□□□ -0.15
VRK3-202ENST00000377011 PPFIA3O75145 1194 aa14.09□□□□□ -0.15
VRK3-202ENST00000377011 ADAMTS4O75173 837 aa14.09□□□□□ -0.15
VRK3-202ENST00000377011 NR1I2O75469 434 aa14.09□□□□□ -0.15
VRK3-202ENST00000377011 DDAH1O94760 285 aa14.09□□□□□ -0.15
VRK3-202ENST00000377011 CDC27P30260 824 aa14.09□□□□□ -0.15
VRK3-202ENST00000377011 HOXA13P31271 388 aaPredicted RBP14.09□□□□□ -0.15
VRK3-202ENST00000377011 APOBRQ0VD83 1088 aa14.09□□□□□ -0.15
VRK3-202ENST00000377011 LRRC41Q15345 812 aa14.09□□□□□ -0.15
VRK3-202ENST00000377011 LRRC26Q2I0M4 334 aa14.09□□□□□ -0.15
VRK3-202ENST00000377011 DNTTIP2Q5QJE6 756 aaKnown RBP14.09□□□□□ -0.15
VRK3-202ENST00000377011 SARM1Q6SZW1 724 aa14.09□□□□□ -0.15
VRK3-202ENST00000377011 PLA2G4DQ86XP0 818 aa14.09□□□□□ -0.15
VRK3-202ENST00000377011 FERMT2Q96AC1 680 aa14.09□□□□□ -0.15
VRK3-202ENST00000377011 C11orf49Q9H6J7 331 aa14.09□□□□□ -0.15
VRK3-202ENST00000377011 SYNRGQ9UMZ2 1314 aa14.08□□□□□ -0.16
VRK3-202ENST00000377011 H0YGN5 161 aa14.08□□□□□ -0.16
VRK3-202ENST00000377011 CTDNEP1O95476 244 aa14.08□□□□□ -0.16
VRK3-202ENST00000377011 ATN1P54259 1190 aaPredicted RBP14.08□□□□□ -0.16
VRK3-202ENST00000377011 FUT2Q10981 343 aa14.08□□□□□ -0.16
VRK3-202ENST00000377011 CAMK4Q16566 473 aa14.08□□□□□ -0.16
VRK3-202ENST00000377011 NECAB2Q7Z6G3 386 aa14.08□□□□□ -0.16
VRK3-202ENST00000377011 MORC4Q8TE76 937 aa14.08□□□□□ -0.16
VRK3-202ENST00000377011 DPF3Q92784 378 aa14.08□□□□□ -0.16
VRK3-202ENST00000377011 MTA3Q9BTC8 594 aa14.08□□□□□ -0.16
VRK3-202ENST00000377011 PCDHA1Q9Y5I3 950 aa14.08□□□□□ -0.16
VRK3-202ENST00000377011 SLC12A7Q9Y666 1083 aa14.08□□□□□ -0.16
VRK3-202ENST00000377011 ABCB11O95342 1321 aa14.08□□□□□ -0.16
VRK3-202ENST00000377011 KLF18A0A0U1RQI7 1052 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 CFBP00751 764 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 AKR1A1P14550 325 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 SMPD1P17405 629 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 PDIA3P30101 505 aaKnown RBP14.07□□□□□ -0.16
VRK3-202ENST00000377011 ZNF165P49910 485 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 ZNF75DP51815 510 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 RBM10P98175 930 aaKnown RBP14.07□□□□□ -0.16
VRK3-202ENST00000377011 STX1AQ16623 288 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 CCDC73Q6ZRK6 1079 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 TMTC3Q6ZXV5 915 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 MSL3Q8N5Y2 521 aaKnown RBP14.07□□□□□ -0.16
VRK3-202ENST00000377011 ANKLE1Q8NAG6 615 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 FANCBQ8NB91 859 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 IL31RAQ8NI17 732 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 AMNQ9BXJ7 453 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 SENP6Q9GZR1 1112 aaPredicted RBP14.07□□□□□ -0.16
VRK3-202ENST00000377011 KCNF1Q9H3M0 494 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 XPNPEP3Q9NQH7 507 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 ADAMTS3O15072 1205 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 ARIH2O95376 493 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 EDNRBP24530 442 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 PLCB2Q00722 1185 aa14.07□□□□□ -0.16
VRK3-202ENST00000377011 BEX3Q00994 111 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms