RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 ELF2Q15723 593 aa22.57■■□□□ 1.2
VSX1-202ENST00000376709 CYP26C1Q6V0L0 522 aa22.57■■□□□ 1.2
VSX1-202ENST00000376709 KCNK18Q7Z418 384 aa22.57■■□□□ 1.2
VSX1-202ENST00000376709 FBXO11Q86XK2 927 aa22.57■■□□□ 1.2
VSX1-202ENST00000376709 FBXO41Q8TF61 875 aa22.57■■□□□ 1.2
VSX1-202ENST00000376709 CNOT6LQ96LI5 555 aaKnown RBP22.57■■□□□ 1.2
VSX1-202ENST00000376709 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.57■■□□□ 1.2
VSX1-202ENST00000376709 COL2A1P02458 1487 aaPredicted RBP22.57■■□□□ 1.2
VSX1-202ENST00000376709 KIF13BQ9NQT8 1826 aa22.57■■□□□ 1.2
VSX1-202ENST00000376709 B4DLN1 442 aa22.57■■□□□ 1.2
VSX1-202ENST00000376709 MEIS2O14770 477 aa22.57■■□□□ 1.2
VSX1-202ENST00000376709 BMP3P12645 472 aa22.57■■□□□ 1.2
VSX1-202ENST00000376709 SYDE2Q5VT97 1194 aa22.57■■□□□ 1.2
VSX1-202ENST00000376709 LRRN4CLQ8ND94 238 aa22.57■■□□□ 1.2
VSX1-202ENST00000376709 ZNF507Q8TCN5 953 aa22.57■■□□□ 1.2
VSX1-202ENST00000376709 DDX12PQ92771 950 aa22.57■■□□□ 1.2
VSX1-202ENST00000376709 HDAC9Q9UKV0 1011 aa22.57■■□□□ 1.2
VSX1-202ENST00000376709 KDM3AQ9Y4C1 1321 aa22.56■■□□□ 1.2
VSX1-202ENST00000376709 MTIF2P46199 727 aaKnown RBP22.56■■□□□ 1.2
VSX1-202ENST00000376709 OGFOD1Q8N543 542 aa22.56■■□□□ 1.2
VSX1-202ENST00000376709 UIMC1Q96RL1 719 aa22.56■■□□□ 1.2
VSX1-202ENST00000376709 NT5C3AQ9H0P0 336 aa22.56■■□□□ 1.2
VSX1-202ENST00000376709 ZNF70Q9UC06 446 aaPredicted RBP22.56■■□□□ 1.2
VSX1-202ENST00000376709 HERC5Q9UII4 1024 aaKnown RBP22.56■■□□□ 1.2
VSX1-202ENST00000376709 ECM1Q16610 540 aa22.56■■□□□ 1.2
VSX1-202ENST00000376709 NIM1KQ8IY84 436 aa22.56■■□□□ 1.2
VSX1-202ENST00000376709 TTC26A0AVF1 554 aa22.55■■□□□ 1.2
VSX1-202ENST00000376709 ERVK-24P63145 666 aa22.55■■□□□ 1.2
VSX1-202ENST00000376709 SPICE1Q8N0Z3 855 aa22.55■■□□□ 1.2
VSX1-202ENST00000376709 SEMA6BQ9H3T3 888 aa22.55■■□□□ 1.2
VSX1-202ENST00000376709 ZNRF3Q9ULT6 936 aa22.55■■□□□ 1.2
VSX1-202ENST00000376709 LUC7L2Q9Y383 392 aaKnown RBP22.55■■□□□ 1.2
VSX1-202ENST00000376709 MCTP2Q6DN12 878 aa22.55■■□□□ 1.2
VSX1-202ENST00000376709 CENPPQ6IPU0 288 aa22.55■■□□□ 1.2
VSX1-202ENST00000376709 MNS1Q8NEH6 495 aa22.55■■□□□ 1.2
VSX1-202ENST00000376709 PIM2Q9P1W9 311 aa22.55■■□□□ 1.2
VSX1-202ENST00000376709 SPDYE3A6NKU9 549 aa22.54■■□□□ 1.2
VSX1-202ENST00000376709 SSBP05455 408 aaKnown RBP eCLIP22.54■■□□□ 1.2
VSX1-202ENST00000376709 ARHGAP4P98171 946 aa22.54■■□□□ 1.2
VSX1-202ENST00000376709 SLFN12Q8IYM2 578 aa22.54■■□□□ 1.2
VSX1-202ENST00000376709 NOC4LQ9BVI4 516 aaKnown RBP22.54■■□□□ 1.2
VSX1-202ENST00000376709 KCNMB3Q9NPA1 279 aa22.54■■□□□ 1.2
VSX1-202ENST00000376709 CYP3A7-CYP3A51PA0A087WV96 503 aa22.53■■□□□ 1.2
VSX1-202ENST00000376709 A0A1W2PRG0 241 aa22.53■■□□□ 1.2
VSX1-202ENST00000376709 CYP3A7P24462 503 aa22.53■■□□□ 1.2
VSX1-202ENST00000376709 TSR1Q2NL82 804 aaKnown RBP22.53■■□□□ 1.2
VSX1-202ENST00000376709 GUF1Q8N442 669 aaKnown RBP22.53■■□□□ 1.2
VSX1-202ENST00000376709 OR8K1Q8NGG5 319 aa22.53■■□□□ 1.2
VSX1-202ENST00000376709 UBE2Q2Q8WVN8 375 aa22.53■■□□□ 1.2
VSX1-202ENST00000376709 VEZTQ9HBM0 779 aa22.53■■□□□ 1.2
VSX1-202ENST00000376709 CNTNAP1P78357 1384 aa22.53■■□□□ 1.2
VSX1-202ENST00000376709 KIF5CO60282 957 aa22.53■■□□□ 1.2
VSX1-202ENST00000376709 TRIM21P19474 475 aaKnown RBP22.53■■□□□ 1.2
VSX1-202ENST00000376709 TBC1D8BQ0IIM8 1120 aa22.53■■□□□ 1.2
VSX1-202ENST00000376709 ERCC6LQ2NKX8 1250 aa22.53■■□□□ 1.2
VSX1-202ENST00000376709 MOXD1Q6UVY6 613 aa22.53■■□□□ 1.2
VSX1-202ENST00000376709 ACRBPQ8NEB7 543 aa22.53■■□□□ 1.2
VSX1-202ENST00000376709 IRX2Q9BZI1 471 aaPredicted RBP22.53■■□□□ 1.2
VSX1-202ENST00000376709 ARHGEF10LQ9HCE6 1279 aa22.53■■□□□ 1.2
VSX1-202ENST00000376709 BMP2KQ9NSY1 1161 aaPredicted RBP22.53■■□□□ 1.2
VSX1-202ENST00000376709 KIAA1024Q9UPX6 916 aa22.53■■□□□ 1.2
VSX1-202ENST00000376709 PSMD2Q13200 908 aa22.52■■□□□ 1.2
VSX1-202ENST00000376709 SPDYE2Q495Y8 402 aa22.52■■□□□ 1.2
VSX1-202ENST00000376709 ARHGAP29Q52LW3 1261 aa22.52■■□□□ 1.2
VSX1-202ENST00000376709 PRR16Q569H4 304 aa22.52■■□□□ 1.2
VSX1-202ENST00000376709 HYIQ5T013 277 aa22.52■■□□□ 1.2
VSX1-202ENST00000376709 FAM151AQ8WW52 585 aa22.52■■□□□ 1.2
VSX1-202ENST00000376709 KIFC2Q96AC6 838 aa22.52■■□□□ 1.2
VSX1-202ENST00000376709 VPS33BQ9H267 617 aa22.52■■□□□ 1.2
VSX1-202ENST00000376709 CAPN11Q9UMQ6 739 aa22.52■■□□□ 1.2
VSX1-202ENST00000376709 PCMTD1Q96MG8 357 aaPredicted RBP22.52■■□□□ 1.2
VSX1-202ENST00000376709 MBOAT7Q96N66 472 aa22.52■■□□□ 1.2
VSX1-202ENST00000376709 SYNPO2Q9UMS6 1093 aa22.52■■□□□ 1.2
VSX1-202ENST00000376709 A0A0U1RQJ8 604 aa22.51■■□□□ 1.19
VSX1-202ENST00000376709 SPDYE4A6NLX3 237 aa22.51■■□□□ 1.19
VSX1-202ENST00000376709 FOSP01100 380 aaPredicted RBP22.51■■□□□ 1.19
VSX1-202ENST00000376709 HOXA7P31268 230 aaPredicted RBP22.51■■□□□ 1.19
VSX1-202ENST00000376709 ECE1P42892 770 aa22.51■■□□□ 1.19
VSX1-202ENST00000376709 STAT2P52630 851 aa22.51■■□□□ 1.19
VSX1-202ENST00000376709 TGFB2P61812 414 aa22.51■■□□□ 1.19
VSX1-202ENST00000376709 CXCL9Q07325 125 aa22.51■■□□□ 1.19
VSX1-202ENST00000376709 BTNL9Q6UXG8 535 aa22.51■■□□□ 1.19
VSX1-202ENST00000376709 CDAN1Q8IWY9 1227 aa22.51■■□□□ 1.19
VSX1-202ENST00000376709 ZNF397Q8NF99 534 aaPredicted RBP22.51■■□□□ 1.19
VSX1-202ENST00000376709 ATRIPQ8WXE1 791 aa22.51■■□□□ 1.19
VSX1-202ENST00000376709 DNAJC7Q99615 494 aa22.51■■□□□ 1.19
VSX1-202ENST00000376709 PRR12Q9ULL5 1215 aa22.51■■□□□ 1.19
VSX1-202ENST00000376709 POTEB3A0JP26 581 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 POTECB2RU33 542 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 E9PMD0 336 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 FGFR1OPO95684 399 aaKnown RBP22.5■■□□□ 1.19
VSX1-202ENST00000376709 LRRC63Q05C16 580 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 DALRD3Q5D0E6 543 aaKnown RBP22.5■■□□□ 1.19
VSX1-202ENST00000376709 FKBP15Q5T1M5 1219 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 POTEBQ6S5H4 581 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 CRYGNQ8WXF5 182 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 P2RX7Q99572 595 aaKnown RBP22.5■■□□□ 1.19
VSX1-202ENST00000376709 NUP58Q9BVL2 599 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 CARD6Q9BX69 1037 aa22.5■■□□□ 1.19
VSX1-202ENST00000376709 PPP1R1BQ9UD71 204 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms