RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 ARHGAP20Q9P2F6 1191 aa10.73□□□□□ -0.69
TRIM39-202ENST00000376659 MYH10P35580 1976 aa10.73□□□□□ -0.69
TRIM39-202ENST00000376659 SLC12A3P55017 1021 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 FAM193AP78312 1265 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 CALCRLQ16602 461 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 JAKMIP3Q5VZ66 844 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 GJA10Q969M2 543 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 SERPINB13Q9UIV8 391 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 EPN1Q9Y6I3 576 aaPredicted RBP10.72□□□□□ -0.69
TRIM39-202ENST00000376659 DDTLA6NHG4 134 aaPredicted RBP10.72□□□□□ -0.69
TRIM39-202ENST00000376659 H3BQF6 201 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 ZBTB5O15062 677 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 NPR1P16066 1061 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 HSPA1LP34931 641 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 FILIP1LQ4L180 1135 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 WDR93Q6P2C0 686 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 NOA1Q8NC60 698 aaKnown RBP10.72□□□□□ -0.69
TRIM39-202ENST00000376659 GMCL1P1Q8NEA9 526 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 OR8K1Q8NGG5 319 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 LARP4BQ92615 738 aaKnown RBP10.72□□□□□ -0.69
TRIM39-202ENST00000376659 GOLGA1Q92805 767 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 PLAGL2Q9UPG8 496 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 USP17L10C9JJH3 530 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 UBA7P41226 1012 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 PPP1R2P41236 205 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 ZBED6P86452 979 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 MOXD1Q6UVY6 613 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 HOMEZQ8IX15 550 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 AMOTL1Q8IY63 956 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 SLF1Q9BQI6 1058 aa10.72□□□□□ -0.69
TRIM39-202ENST00000376659 CCDC151A5D8V7 595 aa10.71□□□□□ -0.69
TRIM39-202ENST00000376659 PSMA7O14818 248 aa10.71□□□□□ -0.69
TRIM39-202ENST00000376659 PLEKP08567 350 aaPredicted RBP10.71□□□□□ -0.69
TRIM39-202ENST00000376659 TPM1P09493 284 aa10.71□□□□□ -0.69
TRIM39-202ENST00000376659 PDE4DQ08499 809 aa10.71□□□□□ -0.69
TRIM39-202ENST00000376659 ZMYM2Q9UBW7 1377 aa10.71□□□□□ -0.69
TRIM39-202ENST00000376659 ATP1A1P05023 1023 aaKnown RBP10.71□□□□□ -0.69
TRIM39-202ENST00000376659 CHMP4BP1P59074 171 aa10.71□□□□□ -0.69
TRIM39-202ENST00000376659 WHAMMP3Q1A5X7 153 aa10.71□□□□□ -0.69
TRIM39-202ENST00000376659 CSGALNACT2Q8N6G5 542 aa10.71□□□□□ -0.69
TRIM39-202ENST00000376659 NHEJ1Q9H9Q4 299 aaPredicted RBP10.71□□□□□ -0.69
TRIM39-202ENST00000376659 PGAP2Q9UHJ9 254 aa10.71□□□□□ -0.69
TRIM39-202ENST00000376659 SALL4Q9UJQ4 1053 aa10.71□□□□□ -0.69
TRIM39-202ENST00000376659 VAV3Q9UKW4 847 aa10.71□□□□□ -0.69
TRIM39-202ENST00000376659 DOCK5Q9H7D0 1870 aa10.71□□□□□ -0.7
TRIM39-202ENST00000376659 PLSCR1O15162 318 aa10.71□□□□□ -0.7
TRIM39-202ENST00000376659 PJA2O43164 708 aa10.71□□□□□ -0.7
TRIM39-202ENST00000376659 TLR2O60603 784 aa10.71□□□□□ -0.7
TRIM39-202ENST00000376659 IRX3P78415 501 aaPredicted RBP10.71□□□□□ -0.7
TRIM39-202ENST00000376659 BMS1Q14692 1282 aaKnown RBP10.71□□□□□ -0.7
TRIM39-202ENST00000376659 Q4G0T1 1027 aa10.71□□□□□ -0.7
TRIM39-202ENST00000376659 VWA3BQ502W6 1294 aa10.71□□□□□ -0.7
TRIM39-202ENST00000376659 ZNF569Q5MCW4 686 aa10.71□□□□□ -0.7
TRIM39-202ENST00000376659 BTNL9Q6UXG8 535 aa10.71□□□□□ -0.7
TRIM39-202ENST00000376659 CCDC170Q8IYT3 715 aa10.71□□□□□ -0.7
TRIM39-202ENST00000376659 NAPGQ99747 312 aaPredicted RBP10.71□□□□□ -0.7
TRIM39-202ENST00000376659 NYAP2Q9P242 653 aa10.71□□□□□ -0.7
TRIM39-202ENST00000376659 L1RE1Q9UN81 338 aa10.71□□□□□ -0.7
TRIM39-202ENST00000376659 BICDL2A1A5D9 508 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 SPATA31C1P0DKV0 1188 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 CRKP46108 304 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 LRRC63Q05C16 580 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 UBXN4Q92575 508 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 DDX12PQ92771 950 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 TRIM47Q96LD4 638 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 SEC63Q9UGP8 760 aaKnown RBP10.7□□□□□ -0.7
TRIM39-202ENST00000376659 DUSP10Q9Y6W6 482 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 CNTNAP1P78357 1384 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 PDE2AO00408 941 aaPredicted RBP10.7□□□□□ -0.7
TRIM39-202ENST00000376659 HDLBPQ00341 1268 aaKnown RBP10.7□□□□□ -0.7
TRIM39-202ENST00000376659 COASYQ13057 564 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 PSMD2Q13200 908 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 KIAA1755Q5JYT7 1200 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 GPATCH4Q5T3I0 446 aaKnown RBP10.7□□□□□ -0.7
TRIM39-202ENST00000376659 ARHGAP27Q6ZUM4 889 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 DCAF4Q8WV16 495 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 GMCL1Q96IK5 515 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 NUP88Q99567 741 aaPredicted RBP10.7□□□□□ -0.7
TRIM39-202ENST00000376659 HDAC6Q9UBN7 1215 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 BHMG1C9JSJ3 638 aaPredicted RBP10.7□□□□□ -0.7
TRIM39-202ENST00000376659 CYP2C19P33261 490 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 BRD3Q15059 726 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 SLC39A2Q9NP94 309 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 USP40Q9NVE5 1235 aa10.7□□□□□ -0.7
TRIM39-202ENST00000376659 CTAGE9A4FU28 777 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 POLD1P28340 1107 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 TXKP42681 527 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 VSNL1P62760 191 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 PICALMQ13492 652 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 NUP58Q9BVL2 599 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 HAUS4Q9H6D7 363 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.69□□□□□ -0.7
TRIM39-202ENST00000376659 LRWD1Q9UFC0 647 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 DDX25Q9UHL0 483 aaKnown RBP10.69□□□□□ -0.7
TRIM39-202ENST00000376659 IGLV3-22A0A075B6J6 115 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 NPHP1O15259 732 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 KIF5CO60282 957 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 MED24O75448 989 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 TRIM37O94972 964 aa10.69□□□□□ -0.7
TRIM39-202ENST00000376659 KIF20AO95235 890 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms