RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 FAM86B2P0C5J1 330 aa12.52□□□□□ -0.41
PDPN-202ENST00000376057 PRR29P0C7W0 189 aa12.52□□□□□ -0.41
PDPN-202ENST00000376057 KARSQ15046 597 aaKnown RBP12.52□□□□□ -0.41
PDPN-202ENST00000376057 KRT79Q5XKE5 535 aa12.52□□□□□ -0.41
PDPN-202ENST00000376057 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.52□□□□□ -0.41
PDPN-202ENST00000376057 PDILTQ8N807 584 aa12.52□□□□□ -0.41
PDPN-202ENST00000376057 CDC25BP30305 580 aa12.51□□□□□ -0.41
PDPN-202ENST00000376057 GRB10Q13322 594 aa12.51□□□□□ -0.41
PDPN-202ENST00000376057 LUZP1Q86V48 1076 aa12.51□□□□□ -0.41
PDPN-202ENST00000376057 ATG4CQ96DT6 458 aa12.51□□□□□ -0.41
PDPN-202ENST00000376057 RTN4Q9NQC3 1192 aaKnown RBP12.51□□□□□ -0.41
PDPN-202ENST00000376057 SLC45A1Q9Y2W3 748 aa12.51□□□□□ -0.41
PDPN-202ENST00000376057 CTDP1Q9Y5B0 961 aaPredicted RBP12.51□□□□□ -0.41
PDPN-202ENST00000376057 GOLGB1Q14789 3259 aaKnown RBP12.51□□□□□ -0.41
PDPN-202ENST00000376057 BMP6P22004 513 aa12.51□□□□□ -0.41
PDPN-202ENST00000376057 HOXA13P31271 388 aaPredicted RBP12.51□□□□□ -0.41
PDPN-202ENST00000376057 COPB2P35606 906 aa12.51□□□□□ -0.41
PDPN-202ENST00000376057 PPP1R2P41236 205 aa12.51□□□□□ -0.41
PDPN-202ENST00000376057 PPP2R5CQ13362 524 aa12.51□□□□□ -0.41
PDPN-202ENST00000376057 CEP55Q53EZ4 464 aa12.51□□□□□ -0.41
PDPN-202ENST00000376057 CHST13Q8NET6 341 aa12.51□□□□□ -0.41
PDPN-202ENST00000376057 SYTL5Q8TDW5 730 aaPredicted RBP12.51□□□□□ -0.41
PDPN-202ENST00000376057 TRERF1Q96PN7 1200 aa12.51□□□□□ -0.41
PDPN-202ENST00000376057 PNMA5Q96PV4 448 aa12.51□□□□□ -0.41
PDPN-202ENST00000376057 TEX13BQ9BXU2 312 aa12.51□□□□□ -0.41
PDPN-202ENST00000376057 RAVER2Q9HCJ3 691 aaKnown RBP12.51□□□□□ -0.41
PDPN-202ENST00000376057 SPDYE16A6NNV3 312 aaPredicted RBP12.5□□□□□ -0.41
PDPN-202ENST00000376057 MSH4O15457 936 aa12.5□□□□□ -0.41
PDPN-202ENST00000376057 PLCG1P19174 1290 aa12.5□□□□□ -0.41
PDPN-202ENST00000376057 NCAPHQ15003 741 aa12.5□□□□□ -0.41
PDPN-202ENST00000376057 B3GNT9Q6UX72 402 aa12.5□□□□□ -0.41
PDPN-202ENST00000376057 FASTKD5Q7L8L6 764 aaKnown RBP12.5□□□□□ -0.41
PDPN-202ENST00000376057 ENOX1Q8TC92 643 aaKnown RBP12.5□□□□□ -0.41
PDPN-202ENST00000376057 TBC1D5Q92609 795 aa12.5□□□□□ -0.41
PDPN-202ENST00000376057 RIT2Q99578 217 aa12.5□□□□□ -0.41
PDPN-202ENST00000376057 POLR3CQ9BUI4 534 aaPredicted RBP12.5□□□□□ -0.41
PDPN-202ENST00000376057 VAV3Q9UKW4 847 aa12.5□□□□□ -0.41
PDPN-202ENST00000376057 UBIAD1Q9Y5Z9 338 aa12.5□□□□□ -0.41
PDPN-202ENST00000376057 GOLGA6L19H0YKK7 550 aa12.5□□□□□ -0.41
PDPN-202ENST00000376057 STAM2O75886 525 aa12.5□□□□□ -0.41
PDPN-202ENST00000376057 TPM4P67936 248 aa12.5□□□□□ -0.41
PDPN-202ENST00000376057 MOGSQ13724 837 aa12.5□□□□□ -0.41
PDPN-202ENST00000376057 HAUS3Q68CZ6 603 aa12.5□□□□□ -0.41
PDPN-202ENST00000376057 PLA2G4DQ86XP0 818 aa12.5□□□□□ -0.41
PDPN-202ENST00000376057 ERMNQ8TAM6 284 aa12.5□□□□□ -0.41
PDPN-202ENST00000376057 GTF3C2Q8WUA4 911 aaPredicted RBP12.5□□□□□ -0.41
PDPN-202ENST00000376057 MXRA8Q9BRK3 442 aa12.5□□□□□ -0.41
PDPN-202ENST00000376057 AGTPBP1Q9UPW5 1226 aa12.5□□□□□ -0.41
PDPN-202ENST00000376057 LOXHD1Q8IVV2 1947 aa12.5□□□□□ -0.41
PDPN-202ENST00000376057 PVALEFA0A1B0GWK0 134 aa12.49□□□□□ -0.41
PDPN-202ENST00000376057 PP2D1A8MPX8 630 aa12.49□□□□□ -0.41
PDPN-202ENST00000376057 PSMD10O75832 226 aa12.49□□□□□ -0.41
PDPN-202ENST00000376057 RHOBTB3O94955 611 aa12.49□□□□□ -0.41
PDPN-202ENST00000376057 PABPC4Q13310 644 aaKnown RBP eCLIP12.49□□□□□ -0.41
PDPN-202ENST00000376057 DGKZQ13574 1117 aa12.49□□□□□ -0.41
PDPN-202ENST00000376057 TMEM132BQ14DG7 1078 aa12.49□□□□□ -0.41
PDPN-202ENST00000376057 PRR16Q569H4 304 aa12.49□□□□□ -0.41
PDPN-202ENST00000376057 ZNF658Q5TYW1 1059 aaPredicted RBP12.49□□□□□ -0.41
PDPN-202ENST00000376057 RAD54LQ92698 747 aa12.49□□□□□ -0.41
PDPN-202ENST00000376057 BLOC1S4Q9NUP1 217 aa12.49□□□□□ -0.41
PDPN-202ENST00000376057 FZD1Q9UP38 647 aa12.49□□□□□ -0.41
PDPN-202ENST00000376057 NFIBO00712 420 aa12.49□□□□□ -0.41
PDPN-202ENST00000376057 MAFGO15525 162 aa12.49□□□□□ -0.41
PDPN-202ENST00000376057 ALAS1P13196 640 aa12.49□□□□□ -0.41
PDPN-202ENST00000376057 RPA1P27694 616 aa12.49□□□□□ -0.41
PDPN-202ENST00000376057 MUM1L1Q5H9M0 696 aa12.49□□□□□ -0.41
PDPN-202ENST00000376057 FOXR2Q6PJQ5 311 aa12.49□□□□□ -0.41
PDPN-202ENST00000376057 ERCC4Q92889 916 aaPredicted RBP12.49□□□□□ -0.41
PDPN-202ENST00000376057 WDR11Q9BZH6 1224 aa12.49□□□□□ -0.41
PDPN-202ENST00000376057 FBXO40Q9UH90 709 aa12.49□□□□□ -0.41
PDPN-202ENST00000376057 BECN2A8MW95 431 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 KLRC4O43908 158 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 RPN1P04843 607 aaKnown RBP12.48□□□□□ -0.41
PDPN-202ENST00000376057 ZNF76P36508 570 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 MYL5Q02045 173 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 RNF207Q6ZRF8 634 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 SV2BQ7L1I2 683 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 RIOX2Q8IUF8 465 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 LRRC15Q8TF66 581 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 MRFAP1L1Q96HT8 127 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 TUFT1Q9NNX1 390 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 MARCH6O60337 910 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 ADCY5O95622 1261 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 CDC25AP30304 524 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 CUL4BQ13620 913 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 OTOP1Q7RTM1 612 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 FCHSD1Q86WN1 690 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 GRAMD1CQ8IYS0 662 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 NEK9Q8TD19 979 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 SNX29Q8TEQ0 813 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 TRIM9Q9C026 710 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 ACAD9Q9H845 621 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 JADE2Q9NQC1 790 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 RNF146Q9NTX7 359 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 COL20A1Q9P218 1284 aa12.48□□□□□ -0.41
PDPN-202ENST00000376057 STAT3P40763 770 aa12.47□□□□□ -0.41
PDPN-202ENST00000376057 AFMP43652 599 aa12.47□□□□□ -0.41
PDPN-202ENST00000376057 RPS6P62753 249 aaKnown RBP12.47□□□□□ -0.41
PDPN-202ENST00000376057 PSMD2Q13200 908 aa12.47□□□□□ -0.41
PDPN-202ENST00000376057 LARP4BQ92615 738 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms