RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 MSLNLQ96KJ4 702 aa20.75■□□□□ 0.91
H2AFX-201ENST00000375167 RB1P06400 928 aa20.74■□□□□ 0.91
H2AFX-201ENST00000375167 ICAM3P32942 547 aa20.74■□□□□ 0.91
H2AFX-201ENST00000375167 GTF2F1P35269 517 aaKnown RBP eCLIP20.74■□□□□ 0.91
H2AFX-201ENST00000375167 PTK7Q13308 1070 aa20.74■□□□□ 0.91
H2AFX-201ENST00000375167 ADAM15Q13444 863 aa20.74■□□□□ 0.91
H2AFX-201ENST00000375167 ZNF618Q5T7W0 954 aa20.74■□□□□ 0.91
H2AFX-201ENST00000375167 AACSQ86V21 672 aa20.74■□□□□ 0.91
H2AFX-201ENST00000375167 SMRP1Q8NCR6 262 aa20.74■□□□□ 0.91
H2AFX-201ENST00000375167 DBF4BQ8NFT6 615 aa20.74■□□□□ 0.91
H2AFX-201ENST00000375167 COPS5Q92905 334 aa20.74■□□□□ 0.91
H2AFX-201ENST00000375167 PPP2R3CQ969Q6 453 aa20.74■□□□□ 0.91
H2AFX-201ENST00000375167 MKL1Q969V6 931 aa20.74■□□□□ 0.91
H2AFX-201ENST00000375167 INCENPQ9NQS7 918 aa20.74■□□□□ 0.91
H2AFX-201ENST00000375167 GTF2IRD1Q9UHL9 959 aa20.74■□□□□ 0.91
H2AFX-201ENST00000375167 NOP58Q9Y2X3 529 aaKnown RBP20.74■□□□□ 0.91
H2AFX-201ENST00000375167 BCAR3O75815 825 aa20.73■□□□□ 0.91
H2AFX-201ENST00000375167 UPP2O95045 317 aa20.73■□□□□ 0.91
H2AFX-201ENST00000375167 PDE4BQ07343 736 aa20.73■□□□□ 0.91
H2AFX-201ENST00000375167 PDE4DQ08499 809 aa20.73■□□□□ 0.91
H2AFX-201ENST00000375167 MBTPS1Q14703 1052 aa20.73■□□□□ 0.91
H2AFX-201ENST00000375167 TRAF7Q6Q0C0 670 aa20.73■□□□□ 0.91
H2AFX-201ENST00000375167 DNAJC2Q99543 621 aaKnown RBP20.73■□□□□ 0.91
H2AFX-201ENST00000375167 MPHOSPH6Q99547 160 aaKnown RBP20.73■□□□□ 0.91
H2AFX-201ENST00000375167 CCPG1Q9ULG6 757 aa20.73■□□□□ 0.91
H2AFX-201ENST00000375167 SLC4A4Q9Y6R1 1079 aa20.73■□□□□ 0.91
H2AFX-201ENST00000375167 IGKV6D-41A0A0C4DH26 115 aa20.72■□□□□ 0.91
H2AFX-201ENST00000375167 C5orf67F2Z3F1 127 aa20.72■□□□□ 0.91
H2AFX-201ENST00000375167 GRM6O15303 877 aa20.72■□□□□ 0.91
H2AFX-201ENST00000375167 TTLL1O95922 423 aa20.72■□□□□ 0.91
H2AFX-201ENST00000375167 TXNP10599 105 aaKnown RBP20.72■□□□□ 0.91
H2AFX-201ENST00000375167 PTPN21Q16825 1174 aa20.72■□□□□ 0.91
H2AFX-201ENST00000375167 FIBCD1Q8N539 461 aa20.72■□□□□ 0.91
H2AFX-201ENST00000375167 C7orf31Q8N865 590 aa20.72■□□□□ 0.91
H2AFX-201ENST00000375167 STAG1Q8WVM7 1258 aa20.72■□□□□ 0.91
H2AFX-201ENST00000375167 TOP1MTQ969P6 601 aa20.72■□□□□ 0.91
H2AFX-201ENST00000375167 RPGRIP1Q96KN7 1286 aa20.72■□□□□ 0.91
H2AFX-201ENST00000375167 RIPOR3Q96MK2 946 aa20.72■□□□□ 0.91
H2AFX-201ENST00000375167 CNTNAP3BQ96NU0 1288 aa20.72■□□□□ 0.91
H2AFX-201ENST00000375167 PHF7Q9BWX1 381 aaPredicted RBP20.72■□□□□ 0.91
H2AFX-201ENST00000375167 CNTNAP3Q9BZ76 1288 aa20.72■□□□□ 0.91
H2AFX-201ENST00000375167 RWDD3Q9Y3V2 267 aa20.72■□□□□ 0.91
H2AFX-201ENST00000375167 DMDP11532 3685 aa20.72■□□□□ 0.91
H2AFX-201ENST00000375167 PDGFBP01127 241 aaPredicted RBP20.72■□□□□ 0.91
H2AFX-201ENST00000375167 RRP1P56182 461 aaKnown RBP20.72■□□□□ 0.91
H2AFX-201ENST00000375167 ATP8B2P98198 1209 aa20.72■□□□□ 0.91
H2AFX-201ENST00000375167 BAATQ14032 418 aaPredicted RBP20.72■□□□□ 0.91
H2AFX-201ENST00000375167 STK11IPQ8N1F8 1099 aa20.72■□□□□ 0.91
H2AFX-201ENST00000375167 RMDN1Q96DB5 314 aa20.72■□□□□ 0.91
H2AFX-201ENST00000375167 CEP95Q96GE4 821 aa20.72■□□□□ 0.91
H2AFX-201ENST00000375167 IFIH1Q9BYX4 1025 aaKnown RBP20.72■□□□□ 0.91
H2AFX-201ENST00000375167 VPS13AQ96RL7 3174 aa20.71■□□□□ 0.91
H2AFX-201ENST00000375167 CSPG5O95196 566 aa20.71■□□□□ 0.91
H2AFX-201ENST00000375167 ADD2P35612 726 aa20.71■□□□□ 0.91
H2AFX-201ENST00000375167 COASYQ13057 564 aa20.71■□□□□ 0.91
H2AFX-201ENST00000375167 TRIM71Q2Q1W2 868 aaKnown RBP20.71■□□□□ 0.91
H2AFX-201ENST00000375167 ZBTB33Q86T24 672 aa20.71■□□□□ 0.91
H2AFX-201ENST00000375167 MTMR4Q9NYA4 1195 aa20.71■□□□□ 0.91
H2AFX-201ENST00000375167 USP15Q9Y4E8 981 aaPredicted RBP20.71■□□□□ 0.91
H2AFX-201ENST00000375167 MMP3P08254 477 aa20.7■□□□□ 0.9
H2AFX-201ENST00000375167 AFG1LQ8WV93 481 aa20.7■□□□□ 0.9
H2AFX-201ENST00000375167 KAT2BQ92831 832 aa20.7■□□□□ 0.9
H2AFX-201ENST00000375167 HDAC6Q9UBN7 1215 aa20.7■□□□□ 0.9
H2AFX-201ENST00000375167 ZNF292O60281 2723 aa20.69■□□□□ 0.9
H2AFX-201ENST00000375167 PTPDC1A2A3K4 754 aa20.69■□□□□ 0.9
H2AFX-201ENST00000375167 MMP1P03956 469 aa20.69■□□□□ 0.9
H2AFX-201ENST00000375167 CASTP20810 708 aaKnown RBP20.69■□□□□ 0.9
H2AFX-201ENST00000375167 BMPR1AP36894 532 aa20.69■□□□□ 0.9
H2AFX-201ENST00000375167 SLC1A4P43007 532 aa20.69■□□□□ 0.9
H2AFX-201ENST00000375167 SNAP25P60880 206 aa20.69■□□□□ 0.9
H2AFX-201ENST00000375167 PLEKHG4Q58EX7 1191 aa20.69■□□□□ 0.9
H2AFX-201ENST00000375167 SEPT8Q92599 483 aa20.69■□□□□ 0.9
H2AFX-201ENST00000375167 IL17RAQ96F46 866 aa20.69■□□□□ 0.9
H2AFX-201ENST00000375167 GMCL1Q96IK5 515 aa20.69■□□□□ 0.9
H2AFX-201ENST00000375167 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.69■□□□□ 0.91e-6■■■□□ 15.4
H2AFX-201ENST00000375167 CLEC1BQ9P126 229 aa20.69■□□□□ 0.9
H2AFX-201ENST00000375167 MYH7P12883 1935 aa20.69■□□□□ 0.9
H2AFX-201ENST00000375167 ACACBO00763 2458 aa20.68■□□□□ 0.9
H2AFX-201ENST00000375167 RBAK-RBAKDNI3L0D1 243 aa20.68■□□□□ 0.9
H2AFX-201ENST00000375167 RARSP54136 660 aaKnown RBP20.68■□□□□ 0.9
H2AFX-201ENST00000375167 SLFNL1Q499Z3 407 aa20.68■□□□□ 0.9
H2AFX-201ENST00000375167 EFHBQ8N7U6 833 aa20.68■□□□□ 0.9
H2AFX-201ENST00000375167 WNT8BQ93098 351 aa20.68■□□□□ 0.9
H2AFX-201ENST00000375167 KATNAL1Q9BW62 490 aa20.68■□□□□ 0.9
H2AFX-201ENST00000375167 EP300Q09472 2414 aaPredicted RBP20.67■□□□□ 0.9
H2AFX-201ENST00000375167 RSPH10B2B2RC85 870 aa20.67■□□□□ 0.9
H2AFX-201ENST00000375167 PLA2G6O60733 806 aa20.67■□□□□ 0.9
H2AFX-201ENST00000375167 ICAM1P05362 532 aa20.67■□□□□ 0.9
H2AFX-201ENST00000375167 RSPH10BP0C881 870 aa20.67■□□□□ 0.9
H2AFX-201ENST00000375167 ERC1Q8IUD2 1116 aa20.67■□□□□ 0.9
H2AFX-201ENST00000375167 ZNF444Q8N0Y2 327 aaPredicted RBP20.67■□□□□ 0.9
H2AFX-201ENST00000375167 TMEM105Q8N8V8 129 aa20.67■□□□□ 0.9
H2AFX-201ENST00000375167 ZNF287Q9HBT7 754 aa20.67■□□□□ 0.9
H2AFX-201ENST00000375167 BAHCC1Q9P281 2608 aa20.66■□□□□ 0.9
H2AFX-201ENST00000375167 B4DLN1 442 aa20.66■□□□□ 0.9
H2AFX-201ENST00000375167 PSEN2P49810 448 aa20.66■□□□□ 0.9
H2AFX-201ENST00000375167 MRPL12P52815 198 aaKnown RBP20.66■□□□□ 0.9
H2AFX-201ENST00000375167 PUM1Q14671 1186 aaKnown RBP eCLIP20.66■□□□□ 0.91e-8■■□□□ 11.9
H2AFX-201ENST00000375167 SBK1Q52WX2 424 aa20.66■□□□□ 0.9
H2AFX-201ENST00000375167 ALG1Q9BT22 464 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms