RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 C1orf112Q9NSG2 853 aa21.47■■□□□ 1.03
COL15A1-201ENST00000375001 KDM3AQ9Y4C1 1321 aa21.47■■□□□ 1.03
COL15A1-201ENST00000375001 DNAJC6O75061 913 aa21.47■■□□□ 1.03
COL15A1-201ENST00000375001 MYO1EQ12965 1108 aa21.47■■□□□ 1.03
COL15A1-201ENST00000375001 RTCBQ9Y3I0 505 aaKnown RBP21.47■■□□□ 1.03
COL15A1-201ENST00000375001 LONP1P36776 959 aaKnown RBP21.46■■□□□ 1.03
COL15A1-201ENST00000375001 MRPS25P82663 173 aaKnown RBP21.46■■□□□ 1.03
COL15A1-201ENST00000375001 SGO2Q562F6 1265 aa21.46■■□□□ 1.03
COL15A1-201ENST00000375001 POLR3CQ9BUI4 534 aaPredicted RBP21.46■■□□□ 1.03
COL15A1-201ENST00000375001 NFU1Q9UMS0 254 aa21.46■■□□□ 1.03
COL15A1-201ENST00000375001 CHGBP05060 677 aa21.46■■□□□ 1.03
COL15A1-201ENST00000375001 PDE6AP16499 860 aa21.46■■□□□ 1.03
COL15A1-201ENST00000375001 SLC1A4P43007 532 aa21.46■■□□□ 1.03
COL15A1-201ENST00000375001 YWHAEP62258 255 aaKnown RBP21.46■■□□□ 1.03
COL15A1-201ENST00000375001 HDLBPQ00341 1268 aaKnown RBP21.46■■□□□ 1.03
COL15A1-201ENST00000375001 MROH5Q6ZUA9 1318 aa21.46■■□□□ 1.03
COL15A1-201ENST00000375001 PLEKHG3A1L390 1219 aa21.46■■□□□ 1.03
COL15A1-201ENST00000375001 MYO1FO00160 1098 aa21.46■■□□□ 1.03
COL15A1-201ENST00000375001 IKBKBO14920 756 aa21.46■■□□□ 1.03
COL15A1-201ENST00000375001 CFBP00751 764 aa21.46■■□□□ 1.03
COL15A1-201ENST00000375001 LMNAP02545 664 aaKnown RBP21.46■■□□□ 1.03
COL15A1-201ENST00000375001 NSFP46459 744 aaKnown RBP21.46■■□□□ 1.03
COL15A1-201ENST00000375001 SH3GL3Q99963 347 aa21.46■■□□□ 1.03
COL15A1-201ENST00000375001 PALMDQ9NP74 551 aa21.46■■□□□ 1.03
COL15A1-201ENST00000375001 MYOM2P54296 1465 aa21.46■■□□□ 1.03
COL15A1-201ENST00000375001 CARMIL3Q8ND23 1372 aa21.46■■□□□ 1.03
COL15A1-201ENST00000375001 USP17L12C9JPN9 530 aa21.45■■□□□ 1.03
COL15A1-201ENST00000375001 USP17L21D6R901 530 aa21.45■■□□□ 1.03
COL15A1-201ENST00000375001 PROSER3Q2NL68 480 aa21.45■■□□□ 1.03
COL15A1-201ENST00000375001 LZTS2Q9BRK4 669 aa21.45■■□□□ 1.03
COL15A1-201ENST00000375001 SPDYE16A6NNV3 312 aaPredicted RBP21.45■■□□□ 1.02
COL15A1-201ENST00000375001 SPDYE2Q495Y8 402 aa21.45■■□□□ 1.02
COL15A1-201ENST00000375001 OSBPL1AQ9BXW6 950 aa21.45■■□□□ 1.02
COL15A1-201ENST00000375001 WARS2Q9UGM6 360 aaKnown RBP21.45■■□□□ 1.02
COL15A1-201ENST00000375001 CFAP65Q6ZU64 1925 aaKnown RBP21.45■■□□□ 1.02
COL15A1-201ENST00000375001 ITKQ08881 620 aa21.45■■□□□ 1.02
COL15A1-201ENST00000375001 PLCB4Q15147 1175 aa21.45■■□□□ 1.02
COL15A1-201ENST00000375001 ZYXQ15942 572 aaKnown RBP21.45■■□□□ 1.02
COL15A1-201ENST00000375001 SMYD4Q8IYR2 804 aaPredicted RBP21.45■■□□□ 1.02
COL15A1-201ENST00000375001 BLIDQ8IZY5 108 aa21.45■■□□□ 1.02
COL15A1-201ENST00000375001 SH2D4AQ9H788 454 aa21.45■■□□□ 1.02
COL15A1-201ENST00000375001 HAUS2Q9NVX0 235 aa21.45■■□□□ 1.02
COL15A1-201ENST00000375001 CA4P22748 312 aa21.45■■□□□ 1.02
COL15A1-201ENST00000375001 YARSP54577 528 aaKnown RBP21.45■■□□□ 1.02
COL15A1-201ENST00000375001 SDR42E1Q8WUS8 393 aa21.45■■□□□ 1.02
COL15A1-201ENST00000375001 MCF2P10911 925 aa21.45■■□□□ 1.02
COL15A1-201ENST00000375001 ZFXP17010 805 aaPredicted RBP21.45■■□□□ 1.02
COL15A1-201ENST00000375001 SLC12A1Q13621 1099 aa21.45■■□□□ 1.02
COL15A1-201ENST00000375001 MAPKAPK5Q8IW41 473 aa21.45■■□□□ 1.02
COL15A1-201ENST00000375001 SYT2Q8N9I0 419 aaPredicted RBP21.45■■□□□ 1.02
COL15A1-201ENST00000375001 SERPINI1Q99574 410 aa21.45■■□□□ 1.02
COL15A1-201ENST00000375001 RCOR1Q9UKL0 485 aa21.45■■□□□ 1.02
COL15A1-201ENST00000375001 TTLL7Q6ZT98 887 aa21.44■■□□□ 1.02
COL15A1-201ENST00000375001 ZSCAN10Q96SZ4 725 aaPredicted RBP21.44■■□□□ 1.02
COL15A1-201ENST00000375001 FMO2Q99518 471 aa21.44■■□□□ 1.02
COL15A1-201ENST00000375001 ZMYND12Q9H0C1 365 aa21.44■■□□□ 1.02
COL15A1-201ENST00000375001 METTL14Q9HCE5 456 aaKnown RBP21.44■■□□□ 1.02
COL15A1-201ENST00000375001 ZCCHC17Q9NP64 241 aaKnown RBP21.44■■□□□ 1.02
COL15A1-201ENST00000375001 TNKSO95271 1327 aa21.44■■□□□ 1.02
COL15A1-201ENST00000375001 MMEP08473 750 aa21.44■■□□□ 1.02
COL15A1-201ENST00000375001 POLD1P28340 1107 aa21.44■■□□□ 1.02
COL15A1-201ENST00000375001 PITPNM3Q9BZ71 974 aa21.44■■□□□ 1.02
COL15A1-201ENST00000375001 SPC25Q9HBM1 224 aa21.44■■□□□ 1.02
COL15A1-201ENST00000375001 RNF14Q9UBS8 474 aa21.44■■□□□ 1.02
COL15A1-201ENST00000375001 CAPN11Q9UMQ6 739 aa21.44■■□□□ 1.02
COL15A1-201ENST00000375001 EXOC1LA0A1B0GW35 172 aa21.44■■□□□ 1.02
COL15A1-201ENST00000375001 GSTA4O15217 222 aa21.44■■□□□ 1.02
COL15A1-201ENST00000375001 GYG2O15488 501 aa21.44■■□□□ 1.02
COL15A1-201ENST00000375001 N4BP1O75113 896 aaKnown RBP21.44■■□□□ 1.02
COL15A1-201ENST00000375001 LMNB1P20700 586 aa21.44■■□□□ 1.02
COL15A1-201ENST00000375001 TCIRG1Q13488 830 aa21.44■■□□□ 1.02
COL15A1-201ENST00000375001 NBPF10Q6P3W6 841 aaKnown RBP21.44■■□□□ 1.02
COL15A1-201ENST00000375001 PIK3R5Q8WYR1 880 aa21.44■■□□□ 1.02
COL15A1-201ENST00000375001 PLAAQ9Y263 795 aa21.44■■□□□ 1.02
COL15A1-201ENST00000375001 EIF3BP55884 814 aaKnown RBP21.44■■□□□ 1.02
COL15A1-201ENST00000375001 FAM26FQ5R3K3 315 aa21.44■■□□□ 1.02
COL15A1-201ENST00000375001 PSPC1Q8WXF1 523 aaKnown RBP21.44■■□□□ 1.02
COL15A1-201ENST00000375001 CCDC127Q96BQ5 260 aa21.44■■□□□ 1.02
COL15A1-201ENST00000375001 UFL1O94874 794 aa21.43■■□□□ 1.02
COL15A1-201ENST00000375001 CDR2Q01850 454 aa21.43■■□□□ 1.02
COL15A1-201ENST00000375001 PTGDRQ13258 359 aa21.43■■□□□ 1.02
COL15A1-201ENST00000375001 STOML1Q9UBI4 398 aa21.43■■□□□ 1.02
COL15A1-201ENST00000375001 TRIP13Q15645 432 aaPredicted RBP21.43■■□□□ 1.02
COL15A1-201ENST00000375001 NOP56O00567 594 aaKnown RBP21.43■■□□□ 1.02
COL15A1-201ENST00000375001 P4HA1P13674 534 aa21.43■■□□□ 1.02
COL15A1-201ENST00000375001 BRD2P25440 801 aaKnown RBP21.43■■□□□ 1.02
COL15A1-201ENST00000375001 DEUP1Q05D60 604 aa21.43■■□□□ 1.02
COL15A1-201ENST00000375001 CC2D1AQ6P1N0 951 aaPredicted RBP21.43■■□□□ 1.02
COL15A1-201ENST00000375001 NBPF3Q9H094 633 aa21.43■■□□□ 1.02
COL15A1-201ENST00000375001 FGFR1OP2Q9NVK5 253 aa21.43■■□□□ 1.02
COL15A1-201ENST00000375001 POLR3EQ9NVU0 708 aa21.43■■□□□ 1.02
COL15A1-201ENST00000375001 SYNMO15061 1565 aa21.43■■□□□ 1.02
COL15A1-201ENST00000375001 DLATP10515 647 aaKnown RBP21.43■■□□□ 1.02
COL15A1-201ENST00000375001 ARID5BQ14865 1188 aa21.43■■□□□ 1.02
COL15A1-201ENST00000375001 EMBQ6PCB8 327 aa21.43■■□□□ 1.02
COL15A1-201ENST00000375001 AP1M1Q9BXS5 423 aa21.43■■□□□ 1.02
COL15A1-201ENST00000375001 A0A0G2JND7 137 aa21.42■■□□□ 1.02
COL15A1-201ENST00000375001 RINT1Q6NUQ1 792 aa21.42■■□□□ 1.02
COL15A1-201ENST00000375001 RFX6Q8HWS3 928 aa21.42■■□□□ 1.02
COL15A1-201ENST00000375001 COPRSQ9NQ92 184 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms