RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 MAP3K14Q99558 947 aa12.61□□□□□ -0.39
HLA-DQA1-202ENST00000374949 TMEM47Q9BQJ4 181 aa12.61□□□□□ -0.39
HLA-DQA1-202ENST00000374949 NKX2-4Q9H2Z4 354 aa12.61□□□□□ -0.39
HLA-DQA1-202ENST00000374949 ACAD9Q9H845 621 aa12.61□□□□□ -0.39
HLA-DQA1-202ENST00000374949 A1CFQ9NQ94 594 aaKnown RBP12.61□□□□□ -0.39
HLA-DQA1-202ENST00000374949 RNF146Q9NTX7 359 aa12.61□□□□□ -0.39
HLA-DQA1-202ENST00000374949 MTMR4Q9NYA4 1195 aa12.61□□□□□ -0.39
HLA-DQA1-202ENST00000374949 STX8Q9UNK0 236 aa12.61□□□□□ -0.39
HLA-DQA1-202ENST00000374949 ZDHHC9Q9Y397 364 aa12.61□□□□□ -0.39
HLA-DQA1-202ENST00000374949 SOWAHBA6NEL2 793 aa12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 TMEM232C9JQI7 657 aa12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 TTLL1O95922 423 aa12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CD4P01730 458 aa12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 BMP3P12645 472 aa12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 TNFAIP2Q03169 654 aa12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 SSRP1Q08945 709 aaKnown RBP12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 RAB30Q15771 203 aa12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CCDC85BQ15834 202 aaPredicted RBP12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 NTRK3Q16288 839 aa12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 RASGRP2Q7LDG7 609 aa12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 TLK2Q86UE8 772 aa12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 FAM133AQ8N9E0 248 aa12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 PNMA1Q8ND90 353 aa12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CTCFLQ8NI51 663 aaPredicted RBP12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 TNPO1Q92973 898 aaKnown RBP12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 AGBL1Q96MI9 1066 aa12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 HIPK3Q9H422 1215 aa12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 IL23AQ9NPF7 189 aa12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 THEGQ9P2T0 379 aa12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 ORC3Q9UBD5 711 aaPredicted RBP12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 YBX2Q9Y2T7 364 aaKnown RBP12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 BDP1A6H8Y1 2624 aa12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 ZNF536O15090 1300 aa12.6□□□□□ -0.39
HLA-DQA1-202ENST00000374949 ZSCAN22P10073 491 aaPredicted RBP12.59□□□□□ -0.39
HLA-DQA1-202ENST00000374949 FDPSP14324 419 aaKnown RBP12.59□□□□□ -0.39
HLA-DQA1-202ENST00000374949 IFNAR1P17181 557 aa12.59□□□□□ -0.39
HLA-DQA1-202ENST00000374949 IGFBP4P22692 258 aa12.59□□□□□ -0.39
HLA-DQA1-202ENST00000374949 KIF5BP33176 963 aa12.59□□□□□ -0.39
HLA-DQA1-202ENST00000374949 GNAQP50148 359 aa12.59□□□□□ -0.39
HLA-DQA1-202ENST00000374949 STAT2P52630 851 aa12.59□□□□□ -0.39
HLA-DQA1-202ENST00000374949 CCL23P55773 120 aa12.59□□□□□ -0.39
HLA-DQA1-202ENST00000374949 SNAP25P60880 206 aa12.59□□□□□ -0.39
HLA-DQA1-202ENST00000374949 IKQ13123 557 aaPredicted RBP12.59□□□□□ -0.39
HLA-DQA1-202ENST00000374949 PKP1Q13835 747 aa12.59□□□□□ -0.39
HLA-DQA1-202ENST00000374949 OTOP2Q7RTS6 562 aa12.59□□□□□ -0.39
HLA-DQA1-202ENST00000374949 FBXO16Q8IX29 292 aaPredicted RBP12.59□□□□□ -0.39
HLA-DQA1-202ENST00000374949 ADAMTS19Q8TE59 1207 aa12.59□□□□□ -0.39
HLA-DQA1-202ENST00000374949 HERVK_113Q902F9 699 aa12.59□□□□□ -0.39
HLA-DQA1-202ENST00000374949 MKL1Q969V6 931 aa12.59□□□□□ -0.39
HLA-DQA1-202ENST00000374949 MSRAQ9UJ68 235 aa12.59□□□□□ -0.39
HLA-DQA1-202ENST00000374949 SYNPO2Q9UMS6 1093 aa12.59□□□□□ -0.39
HLA-DQA1-202ENST00000374949 GNEQ9Y223 722 aaKnown RBP12.59□□□□□ -0.39
HLA-DQA1-202ENST00000374949 H3BQV1 296 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 SMPD1P17405 629 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 COL9A1P20849 921 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 PSMC6P62333 389 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 NKX3-2P78367 333 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 ITGA7Q13683 1181 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 SCN5AQ14524 2016 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 GRM4Q14833 912 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 FSCN1Q16658 493 aaKnown RBP12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 TMEM63BQ5T3F8 832 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 FOXD4L5Q5VV16 416 aaPredicted RBP12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 EEPD1Q7L9B9 569 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 TRIM22Q8IYM9 498 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 SLC43A3Q8NBI5 491 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 RGS22Q8NE09 1264 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 ATXN2LQ8WWM7 1075 aaKnown RBP12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 FOXD4L4Q8WXT5 416 aaPredicted RBP12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 WASF1Q92558 559 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 NOC4LQ9BVI4 516 aaKnown RBP12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 TRPV6Q9H1D0 765 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 WNT8AQ9H1J5 351 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 MTIF3Q9H2K0 278 aaKnown RBP12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 PDGFCQ9NRA1 345 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 RAPGEFL1Q9UHV5 662 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 MTMR6Q9Y217 621 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 GRIN2DO15399 1336 aa12.58□□□□□ -0.4
HLA-DQA1-202ENST00000374949 TANC1Q9C0D5 1861 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 VPS37CA5D8V6 355 aaPredicted RBP12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 ASB14A6NK59 587 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 B4GALT4O60513 344 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 PPFIA3O75145 1194 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 FGBP02675 491 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 ALAS1P13196 640 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 SLC1A4P43007 532 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 RABGGTBP53611 331 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 AKAP17AQ02040 695 aaKnown RBP12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 MUM1L1Q5H9M0 696 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 CLEC17AQ6ZS10 378 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 TMTC3Q6ZXV5 915 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 KCTD1Q719H9 257 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 FAM160B2Q86V87 743 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 MICALL1Q8N3F8 863 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 PHKBQ93100 1093 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 GMCL1Q96IK5 515 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 TRERF1Q96PN7 1200 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 GBP4Q96PP9 640 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 ASB2Q96Q27 587 aa12.57□□□□□ -0.4
HLA-DQA1-202ENST00000374949 LZTS2Q9BRK4 669 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms