RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 STK24Q9Y6E0 443 aa20.17■□□□□ 0.82
HLA-DQB1-201ENST00000374943 LRRC10BA6NIK2 292 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 GCOM1H8Y6P7 765 aaPredicted RBP20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 PSMA7O14818 248 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 POLR2MP0CAP2 368 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 HOXA13P31271 388 aaPredicted RBP20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 TERF1P54274 439 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 MCM6Q14566 821 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 TPD52L1Q16890 204 aaPredicted RBP20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 SPECC1LQ69YQ0 1117 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 CCDC174Q6PII3 467 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 UNC13DQ70J99 1090 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 CCDC84Q86UT8 332 aaPredicted RBP20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 ADD3Q9UEY8 706 aaKnown RBP20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 ZNF112Q9UJU3 913 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 RLFQ13129 1914 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 LOXHD1Q8IVV2 1947 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 MYMKA6NI61 221 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 FAM86B1E9PN63 330 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 NRDCO43847 1150 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 FAM86B2P0C5J1 330 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 PDE4DQ08499 809 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 SPIRE1Q08AE8 756 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 PRR16Q569H4 304 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 CCDC112Q8NEF3 446 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 EHMT1Q9H9B1 1298 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 FBXO28Q9NVF7 368 aa20.16■□□□□ 0.82
HLA-DQB1-201ENST00000374943 ICAM1P05362 532 aa20.15■□□□□ 0.82
HLA-DQB1-201ENST00000374943 CCT6AP40227 531 aaKnown RBP20.15■□□□□ 0.82
HLA-DQB1-201ENST00000374943 GPR162Q16538 588 aa20.15■□□□□ 0.82
HLA-DQB1-201ENST00000374943 ECM1Q16610 540 aa20.15■□□□□ 0.82
HLA-DQB1-201ENST00000374943 NBPF12Q5TAG4 269 aaPredicted RBP20.15■□□□□ 0.82
HLA-DQB1-201ENST00000374943 LDHDQ86WU2 507 aa20.15■□□□□ 0.82
HLA-DQB1-201ENST00000374943 GPC2Q8N158 579 aa20.15■□□□□ 0.82
HLA-DQB1-201ENST00000374943 PRPF38AQ8NAV1 312 aaKnown RBP20.15■□□□□ 0.82
HLA-DQB1-201ENST00000374943 GJA10Q969M2 543 aa20.15■□□□□ 0.82
HLA-DQB1-201ENST00000374943 SLF1Q9BQI6 1058 aa20.15■□□□□ 0.82
HLA-DQB1-201ENST00000374943 GPRC5DQ9NZD1 345 aa20.15■□□□□ 0.82
HLA-DQB1-201ENST00000374943 LMNB1P20700 586 aa20.14■□□□□ 0.81
HLA-DQB1-201ENST00000374943 INPP5BP32019 993 aa20.14■□□□□ 0.81
HLA-DQB1-201ENST00000374943 PBX1P40424 430 aa20.14■□□□□ 0.81
HLA-DQB1-201ENST00000374943 GHRHRQ02643 423 aa20.14■□□□□ 0.81
HLA-DQB1-201ENST00000374943 FILIP1LQ4L180 1135 aa20.14■□□□□ 0.81
HLA-DQB1-201ENST00000374943 HAUS3Q68CZ6 603 aa20.14■□□□□ 0.81
HLA-DQB1-201ENST00000374943 KCNK18Q7Z418 384 aa20.14■□□□□ 0.81
HLA-DQB1-201ENST00000374943 NOC3LQ8WTT2 800 aaKnown RBP20.14■□□□□ 0.81
HLA-DQB1-201ENST00000374943 WDR18Q9BV38 432 aa20.14■□□□□ 0.81
HLA-DQB1-201ENST00000374943 PPP2R3BQ9Y5P8 575 aa20.14■□□□□ 0.81
HLA-DQB1-201ENST00000374943 COL11A1P12107 1806 aaPredicted RBP20.14■□□□□ 0.81
HLA-DQB1-201ENST00000374943 ZNF536O15090 1300 aa20.14■□□□□ 0.81
HLA-DQB1-201ENST00000374943 IGLV3-22A0A075B6J6 115 aa20.13■□□□□ 0.81
HLA-DQB1-201ENST00000374943 CFBP00751 764 aa20.13■□□□□ 0.81
HLA-DQB1-201ENST00000374943 C1QTNF8P60827 252 aa20.13■□□□□ 0.81
HLA-DQB1-201ENST00000374943 EHHADHQ08426 723 aa20.13■□□□□ 0.81
HLA-DQB1-201ENST00000374943 TTI2Q6NXR4 508 aa20.13■□□□□ 0.81
HLA-DQB1-201ENST00000374943 ANKRD20A12PQ8NF67 263 aa20.13■□□□□ 0.81
HLA-DQB1-201ENST00000374943 TMX1Q9H3N1 280 aa20.13■□□□□ 0.81
HLA-DQB1-201ENST00000374943 THAP9Q9H5L6 903 aa20.13■□□□□ 0.81
HLA-DQB1-201ENST00000374943 MAPK8IP1Q9UQF2 711 aa20.13■□□□□ 0.81
HLA-DQB1-201ENST00000374943 BICDL2A1A5D9 508 aa20.13■□□□□ 0.81
HLA-DQB1-201ENST00000374943 MSH4O15457 936 aa20.13■□□□□ 0.81
HLA-DQB1-201ENST00000374943 CCNE1P24864 410 aa20.13■□□□□ 0.81
HLA-DQB1-201ENST00000374943 USP14P54578 494 aa20.13■□□□□ 0.81
HLA-DQB1-201ENST00000374943 KRT31Q15323 416 aa20.13■□□□□ 0.81
HLA-DQB1-201ENST00000374943 TCP11X2Q5H9J9 407 aa20.13■□□□□ 0.81
HLA-DQB1-201ENST00000374943 SCYL3Q8IZE3 742 aa20.13■□□□□ 0.81
HLA-DQB1-201ENST00000374943 ERMNQ8TAM6 284 aa20.13■□□□□ 0.81
HLA-DQB1-201ENST00000374943 WDR90Q96KV7 1748 aa20.13■□□□□ 0.81
HLA-DQB1-201ENST00000374943 PAPPA2Q9BXP8 1791 aa20.12■□□□□ 0.81
HLA-DQB1-201ENST00000374943 ITIH6Q6UXX5 1313 aa20.12■□□□□ 0.81
HLA-DQB1-201ENST00000374943 KCNJ18B7U540 433 aa20.12■□□□□ 0.81
HLA-DQB1-201ENST00000374943 HSD17B4P51659 736 aa20.12■□□□□ 0.81
HLA-DQB1-201ENST00000374943 STK4Q13043 487 aa20.12■□□□□ 0.81
HLA-DQB1-201ENST00000374943 PSMD2Q13200 908 aa20.12■□□□□ 0.81
HLA-DQB1-201ENST00000374943 KCNJ12Q14500 433 aa20.12■□□□□ 0.81
HLA-DQB1-201ENST00000374943 ANGEL2Q5VTE6 544 aaKnown RBP20.12■□□□□ 0.81
HLA-DQB1-201ENST00000374943 FCHSD1Q86WN1 690 aa20.12■□□□□ 0.81
HLA-DQB1-201ENST00000374943 KIAA0895Q8NCT3 520 aa20.12■□□□□ 0.81
HLA-DQB1-201ENST00000374943 TRPM4Q8TD43 1214 aa20.12■□□□□ 0.81
HLA-DQB1-201ENST00000374943 TBC1D5Q92609 795 aa20.12■□□□□ 0.81
HLA-DQB1-201ENST00000374943 P2RX5Q93086 422 aa20.12■□□□□ 0.81
HLA-DQB1-201ENST00000374943 VAV3Q9UKW4 847 aa20.12■□□□□ 0.81
HLA-DQB1-201ENST00000374943 PNMA2Q9UL42 364 aa20.12■□□□□ 0.81
HLA-DQB1-201ENST00000374943 RABGAP1Q9Y3P9 1069 aa20.12■□□□□ 0.81
HLA-DQB1-201ENST00000374943 EEF1GP26641 437 aaKnown RBP20.11■□□□□ 0.81
HLA-DQB1-201ENST00000374943 ZNF76P36508 570 aa20.11■□□□□ 0.81
HLA-DQB1-201ENST00000374943 PMS1P54277 932 aaKnown RBP20.11■□□□□ 0.81
HLA-DQB1-201ENST00000374943 DNTTIP2Q5QJE6 756 aaKnown RBP20.11■□□□□ 0.81
HLA-DQB1-201ENST00000374943 IRF2BP1Q8IU81 584 aa20.11■□□□□ 0.81
HLA-DQB1-201ENST00000374943 KCTD17Q8N5Z5 321 aa20.11■□□□□ 0.81
HLA-DQB1-201ENST00000374943 DDX12PQ92771 950 aa20.11■□□□□ 0.81
HLA-DQB1-201ENST00000374943 DNAJC19Q96DA6 116 aa20.11■□□□□ 0.81
HLA-DQB1-201ENST00000374943 AS3MTQ9HBK9 375 aa20.11■□□□□ 0.81
HLA-DQB1-201ENST00000374943 SLC38A10Q9HBR0 1119 aa20.11■□□□□ 0.81
HLA-DQB1-201ENST00000374943 CCPG1Q9ULG6 757 aa20.11■□□□□ 0.81
HLA-DQB1-201ENST00000374943 POTEB3A0JP26 581 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 TRIM49BA6NDI0 452 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 POTECB2RU33 542 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 TEX33O43247 280 aa20.1■□□□□ 0.81
HLA-DQB1-201ENST00000374943 FDX1P10109 184 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms