RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 AKR1B10O60218 316 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 HSF2BPO75031 334 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 ANKRD40Q6AI12 368 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 ANKRD13CQ8N6S4 541 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 TSEN2Q8NCE0 465 aaKnown RBP12.31□□□□□ -0.44
CCDC40-203ENST00000374877 KAT2BQ92831 832 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 P2RX5Q93086 422 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 ARL8AQ96BM9 186 aa12.31□□□□□ -0.44
CCDC40-203ENST00000374877 FAM207AQ9NSI2 230 aaPredicted RBP12.31□□□□□ -0.44
CCDC40-203ENST00000374877 ATP1A2P50993 1020 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 ASIC1P78348 528 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 PDCLQ13371 301 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 FBXW10Q5XX13 1052 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 KCTD16Q68DU8 428 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 GBP6Q6ZN66 633 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 SUPT20HQ8NEM7 779 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 TBC1D22AQ8WUA7 517 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 CCDC47Q96A33 483 aaKnown RBP12.3□□□□□ -0.44
CCDC40-203ENST00000374877 DHTKD1Q96HY7 919 aaPredicted RBP12.3□□□□□ -0.44
CCDC40-203ENST00000374877 OSBPL9Q96SU4 736 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 PCDHA13Q9Y5I0 950 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 NDUFAB1O14561 156 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 NKRFO15226 690 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCDC40-203ENST00000374877 NCK2O43639 380 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 ZBTB7AO95365 584 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 CCNE1P24864 410 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 INPP5BP32019 993 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 DNA2P51530 1060 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 EPHB4P54760 987 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 NAP1L1P55209 391 aaKnown RBP12.3□□□□□ -0.44
CCDC40-203ENST00000374877 CACNA1SQ13698 1873 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 INF2Q27J81 1249 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 FAM114A1Q8IWE2 563 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 TTLL6Q8N841 843 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 NSUN4Q96CB9 384 aaKnown RBP12.3□□□□□ -0.44
CCDC40-203ENST00000374877 GPR101Q96P66 508 aaPredicted RBP12.3□□□□□ -0.44
CCDC40-203ENST00000374877 ALS2CR12Q96Q35 445 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 ZC3H12CQ9C0D7 883 aaKnown RBP12.3□□□□□ -0.44
CCDC40-203ENST00000374877 GRIN2DO15399 1336 aa12.3□□□□□ -0.44
CCDC40-203ENST00000374877 BICDL2A1A5D9 508 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 TSPY2A6NKD2 308 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 ERCC3P19447 782 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 PAFAH1B1P43034 410 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 KIF11P52732 1056 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 R3HDM1Q15032 1099 aaKnown RBP12.29□□□□□ -0.44
CCDC40-203ENST00000374877 C8orf74Q6P047 294 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 SH2D3CQ8N5H7 860 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 SH2D4AQ9H788 454 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 STIM2Q9P246 746 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 HYOU1Q9Y4L1 999 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 ZEB2O60315 1214 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 FCER1AP12319 257 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 STK4Q13043 487 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 HPS3Q969F9 1004 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 MMRN2Q9H8L6 949 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 KBTBD4Q9NVX7 518 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 ARHGAP20Q9P2F6 1191 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 BAZ2AQ9UIF9 1905 aaKnown RBP12.29□□□□□ -0.44
CCDC40-203ENST00000374877 KIAA1551Q9HCM1 1747 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 PLCG1P19174 1290 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 EIF4A3P38919 411 aaKnown RBP12.29□□□□□ -0.44
CCDC40-203ENST00000374877 GSTO1P78417 241 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 TTMPQ5BVD1 217 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 SGIP1Q9BQI5 828 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 PCDHA4Q9UN74 947 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 SUGT1Q9Y2Z0 365 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 MYH10P35580 1976 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 SLX4Q8IY92 1834 aa12.29□□□□□ -0.44
CCDC40-203ENST00000374877 TCP1P17987 556 aaKnown RBP12.28□□□□□ -0.44
CCDC40-203ENST00000374877 KIF5BP33176 963 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 MNAT1P51948 309 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 MIIPQ5JXC2 388 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 SOGA3Q5TF21 947 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 HAUS3Q68CZ6 603 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 MCTP2Q6DN12 878 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 LRRC15Q8TF66 581 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 KRT14P02533 472 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 DPEP1P16444 411 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 KCNA3P22001 575 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 MECOMQ03112 1051 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 EMBQ6PCB8 327 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 SUGP1Q8IWZ8 645 aaKnown RBP12.28□□□□□ -0.44
CCDC40-203ENST00000374877 SH3GL2Q99962 352 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 YY1AP1Q9H869 796 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 H0YHG0 523 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 EPHB6O15197 1021 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 BUB1O43683 1085 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 LDHBP07195 334 aaKnown RBP12.28□□□□□ -0.44
CCDC40-203ENST00000374877 CYP2D6P10635 497 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 HEATR3Q7Z4Q2 680 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 CABP7Q86V35 215 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 GPATCH11Q8N954 259 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 ZIM3Q96PE6 472 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 CD2APQ9Y5K6 639 aa12.28□□□□□ -0.44
CCDC40-203ENST00000374877 KIAA0754O94854 1291 aa12.27□□□□□ -0.44
CCDC40-203ENST00000374877 MYL1P05976 194 aa12.27□□□□□ -0.44
CCDC40-203ENST00000374877 MAGEA1P43355 309 aa12.27□□□□□ -0.44
CCDC40-203ENST00000374877 ATP2B2Q01814 1243 aa12.27□□□□□ -0.44
CCDC40-203ENST00000374877 RRAGAQ7L523 313 aa12.27□□□□□ -0.44
CCDC40-203ENST00000374877 POTEDQ86YR6 584 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms