RNA–Protein interactions for RNA: ENST00000374733.1

ABCA1-201, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-201ENST00000374733 SPTLC1O15269 473 aa12.87□□□□□ -0.35
ABCA1-201ENST00000374733 POLR3DP05423 398 aaPredicted RBP12.87□□□□□ -0.35
ABCA1-201ENST00000374733 SMPD1P17405 629 aa12.87□□□□□ -0.35
ABCA1-201ENST00000374733 LTBRP36941 435 aa12.87□□□□□ -0.35
ABCA1-201ENST00000374733 COL19A1Q14993 1142 aa12.87□□□□□ -0.35
ABCA1-201ENST00000374733 ANKRD35Q8N283 1001 aa12.87□□□□□ -0.35
ABCA1-201ENST00000374733 NSUN3Q9H649 340 aaKnown RBP12.87□□□□□ -0.35
ABCA1-201ENST00000374733 SCN10AQ9Y5Y9 1956 aa12.87□□□□□ -0.35
ABCA1-201ENST00000374733 MICAL3Q7RTP6 2002 aa12.86□□□□□ -0.35
ABCA1-201ENST00000374733 EP300Q09472 2414 aaPredicted RBP12.86□□□□□ -0.35
ABCA1-201ENST00000374733 ADH1BP00325 375 aa12.86□□□□□ -0.35
ABCA1-201ENST00000374733 CYP2E1P05181 493 aaPredicted RBP12.86□□□□□ -0.35
ABCA1-201ENST00000374733 NDUFV2P19404 249 aa12.86□□□□□ -0.35
ABCA1-201ENST00000374733 NBL1P41271 181 aa12.86□□□□□ -0.35
ABCA1-201ENST00000374733 GABPAQ06546 454 aa12.86□□□□□ -0.35
ABCA1-201ENST00000374733 DLX2Q07687 328 aaPredicted RBP12.86□□□□□ -0.35
ABCA1-201ENST00000374733 SIGLEC14Q08ET2 396 aa12.86□□□□□ -0.35
ABCA1-201ENST00000374733 FAM83BQ5T0W9 1011 aa12.86□□□□□ -0.35
ABCA1-201ENST00000374733 TMEM63BQ5T3F8 832 aa12.86□□□□□ -0.35
ABCA1-201ENST00000374733 BRICD5Q6PL45 260 aa12.86□□□□□ -0.35
ABCA1-201ENST00000374733 FRMD5Q7Z6J6 570 aa12.86□□□□□ -0.35
ABCA1-201ENST00000374733 SIAH1Q8IUQ4 282 aa12.86□□□□□ -0.35
ABCA1-201ENST00000374733 CPXCR1Q8N123 301 aa12.86□□□□□ -0.35
ABCA1-201ENST00000374733 NKD2Q969F2 451 aaPredicted RBP12.86□□□□□ -0.35
ABCA1-201ENST00000374733 RMDN1Q96DB5 314 aa12.86□□□□□ -0.35
ABCA1-201ENST00000374733 SPSB2Q99619 263 aa12.86□□□□□ -0.35
ABCA1-201ENST00000374733 PIH1D3Q9NQM4 214 aaKnown RBP12.86□□□□□ -0.35
ABCA1-201ENST00000374733 PTPRCP08575 1304 aa12.86□□□□□ -0.35
ABCA1-201ENST00000374733 SMAD4Q13485 552 aaKnown RBP12.85□□□□□ -0.35
ABCA1-201ENST00000374733 BFSP2Q13515 415 aa12.85□□□□□ -0.35
ABCA1-201ENST00000374733 TUSC1Q2TAM9 212 aa12.85□□□□□ -0.35
ABCA1-201ENST00000374733 TTC39AQ5SRH9 613 aa12.85□□□□□ -0.35
ABCA1-201ENST00000374733 WDR63Q8IWG1 891 aa12.85□□□□□ -0.35
ABCA1-201ENST00000374733 THAP11Q96EK4 314 aa12.85□□□□□ -0.35
ABCA1-201ENST00000374733 ASIC4Q96FT7 647 aa12.85□□□□□ -0.35
ABCA1-201ENST00000374733 NOD1Q9Y239 953 aa12.85□□□□□ -0.35
ABCA1-201ENST00000374733 DDX49Q9Y6V7 483 aaKnown RBP12.85□□□□□ -0.35
ABCA1-201ENST00000374733 MYL3P08590 195 aa12.84□□□□□ -0.35
ABCA1-201ENST00000374733 AKR1B1P15121 316 aa12.84□□□□□ -0.35
ABCA1-201ENST00000374733 CNTN2Q02246 1040 aa12.84□□□□□ -0.35
ABCA1-201ENST00000374733 GPM6BQ13491 265 aa12.84□□□□□ -0.35
ABCA1-201ENST00000374733 EPC2Q52LR7 807 aa12.84□□□□□ -0.35
ABCA1-201ENST00000374733 FBXO16Q8IX29 292 aaPredicted RBP12.84□□□□□ -0.35
ABCA1-201ENST00000374733 GOPCQ9HD26 462 aa12.84□□□□□ -0.35
ABCA1-201ENST00000374733 PDGFCQ9NRA1 345 aa12.84□□□□□ -0.35
ABCA1-201ENST00000374733 FRYLO94915 3013 aa12.83□□□□□ -0.35
ABCA1-201ENST00000374733 RALGAPA2Q2PPJ7 1873 aa12.83□□□□□ -0.36
ABCA1-201ENST00000374733 TBX10O75333 385 aa12.83□□□□□ -0.36
ABCA1-201ENST00000374733 IDH1O75874 414 aaKnown RBP12.83□□□□□ -0.36
ABCA1-201ENST00000374733 PDGFBP01127 241 aaPredicted RBP12.83□□□□□ -0.36
ABCA1-201ENST00000374733 GGCXP38435 758 aa12.83□□□□□ -0.36
ABCA1-201ENST00000374733 GUCA2AQ02747 115 aa12.83□□□□□ -0.36
ABCA1-201ENST00000374733 DDX10Q13206 875 aaKnown RBP12.83□□□□□ -0.36
ABCA1-201ENST00000374733 TCTN1Q2MV58 587 aa12.83□□□□□ -0.36
ABCA1-201ENST00000374733 NBPF20Q3BBV1 942 aa12.83□□□□□ -0.36
ABCA1-201ENST00000374733 CNKSR3Q6P9H4 555 aa12.83□□□□□ -0.36
ABCA1-201ENST00000374733 EEPD1Q7L9B9 569 aa12.83□□□□□ -0.36
ABCA1-201ENST00000374733 CERS3Q8IU89 383 aa12.83□□□□□ -0.36
ABCA1-201ENST00000374733 SLF1Q9BQI6 1058 aa12.83□□□□□ -0.36
ABCA1-201ENST00000374733 MCM9Q9NXL9 1143 aa12.83□□□□□ -0.36
ABCA1-201ENST00000374733 CEP250Q9BV73 2442 aa12.83□□□□□ -0.36
ABCA1-201ENST00000374733 SPTBN2O15020 2390 aa12.83□□□□□ -0.36
ABCA1-201ENST00000374733 CSPG5O95196 566 aa12.82□□□□□ -0.36
ABCA1-201ENST00000374733 ZAP70P43403 619 aa12.82□□□□□ -0.36
ABCA1-201ENST00000374733 CLK2P49760 499 aaKnown RBP12.82□□□□□ -0.36
ABCA1-201ENST00000374733 PURAQ00577 322 aaKnown RBP12.82□□□□□ -0.36
ABCA1-201ENST00000374733 GPNMBQ14956 572 aa12.82□□□□□ -0.36
ABCA1-201ENST00000374733 CTC1Q2NKJ3 1217 aa12.82□□□□□ -0.36
ABCA1-201ENST00000374733 LRRFIP1Q32MZ4 808 aaKnown RBP12.82□□□□□ -0.36
ABCA1-201ENST00000374733 NUP88Q99567 741 aaPredicted RBP12.82□□□□□ -0.36
ABCA1-201ENST00000374733 RAVER2Q9HCJ3 691 aaKnown RBP12.82□□□□□ -0.36
ABCA1-201ENST00000374733 HOMER2Q9NSB8 354 aa12.82□□□□□ -0.36
ABCA1-201ENST00000374733 POLR3EQ9NVU0 708 aa12.82□□□□□ -0.36
ABCA1-201ENST00000374733 CD207Q9UJ71 328 aa12.82□□□□□ -0.36
ABCA1-201ENST00000374733 PCDHGC3Q9UN70 934 aa12.82□□□□□ -0.36
ABCA1-201ENST00000374733 INSL6Q9Y581 213 aa12.82□□□□□ -0.36
ABCA1-201ENST00000374733 CTDP1Q9Y5B0 961 aaPredicted RBP12.82□□□□□ -0.36
ABCA1-201ENST00000374733 E9PSI1 815 aa12.81□□□□□ -0.36
ABCA1-201ENST00000374733 H3BNC9 293 aa12.81□□□□□ -0.36
ABCA1-201ENST00000374733 SRGAP3O43295 1099 aa12.81□□□□□ -0.36
ABCA1-201ENST00000374733 NCK2O43639 380 aa12.81□□□□□ -0.36
ABCA1-201ENST00000374733 CYP2D6P10635 497 aa12.81□□□□□ -0.36
ABCA1-201ENST00000374733 EEF2P13639 858 aaKnown RBP12.81□□□□□ -0.36
ABCA1-201ENST00000374733 CHMP4BP1P59074 171 aa12.81□□□□□ -0.36
ABCA1-201ENST00000374733 MCTP2Q6DN12 878 aa12.81□□□□□ -0.36
ABCA1-201ENST00000374733 FAM133AQ8N9E0 248 aa12.81□□□□□ -0.36
ABCA1-201ENST00000374733 AFAP1L1Q8TED9 768 aa12.81□□□□□ -0.36
ABCA1-201ENST00000374733 DYNLL2Q96FJ2 89 aa12.81□□□□□ -0.36
ABCA1-201ENST00000374733 USB1Q9BQ65 265 aaKnown RBP12.81□□□□□ -0.36
ABCA1-201ENST00000374733 MTG1Q9BT17 334 aaPredicted RBP12.81□□□□□ -0.36
ABCA1-201ENST00000374733 PRKRIP1Q9H875 184 aaPredicted RBP12.81□□□□□ -0.36
ABCA1-201ENST00000374733 BAZ2AQ9UIF9 1905 aaKnown RBP12.81□□□□□ -0.36
ABCA1-201ENST00000374733 LCTP09848 1927 aa12.8□□□□□ -0.36
ABCA1-201ENST00000374733 ABHD14A-ACY1A0A1B0GW23 586 aa12.8□□□□□ -0.36
ABCA1-201ENST00000374733 ASB14A6NK59 587 aa12.8□□□□□ -0.36
ABCA1-201ENST00000374733 LOC730098B7Z3J9 87 aa12.8□□□□□ -0.36
ABCA1-201ENST00000374733 HYAL1Q12794 435 aa12.8□□□□□ -0.36
ABCA1-201ENST00000374733 COL9A2Q14055 689 aaPredicted RBP12.8□□□□□ -0.36
ABCA1-201ENST00000374733 IQSEC1Q6DN90 963 aa12.8□□□□□ -0.36
ABCA1-201ENST00000374733 RNF19BQ6ZMZ0 732 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms