RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 FAM86B2P0C5J1 330 aa16.61■□□□□ 0.25
SMPDL3B-201ENST00000373888 ALDH5A1P51649 535 aaPredicted RBP16.61■□□□□ 0.25
SMPDL3B-201ENST00000373888 ATP2C1P98194 919 aaPredicted RBP16.61■□□□□ 0.25
SMPDL3B-201ENST00000373888 PWP2Q15269 919 aaKnown RBP16.61■□□□□ 0.25
SMPDL3B-201ENST00000373888 ZNF792Q3KQV3 632 aa16.61■□□□□ 0.25
SMPDL3B-201ENST00000373888 Q4G0T1 1027 aa16.61■□□□□ 0.25
SMPDL3B-201ENST00000373888 MORN1Q5T089 497 aa16.61■□□□□ 0.25
SMPDL3B-201ENST00000373888 VSIG10LQ86VR7 867 aa16.61■□□□□ 0.25
SMPDL3B-201ENST00000373888 C4orf32Q8N8J7 132 aa16.61■□□□□ 0.25
SMPDL3B-201ENST00000373888 LAD1O00515 517 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 SLC37A4O43826 429 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 NEMFO60524 1076 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 COBLO75128 1261 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 PPP6R2O75170 966 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 EDNRBP24530 442 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 CCND2P30279 289 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 MRPS9P82933 396 aaKnown RBP16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 LACTBP83111 547 aaPredicted RBP16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 MAP2K1Q02750 393 aaPredicted RBP16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 PTGDRQ13258 359 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 CEP55Q53EZ4 464 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 L1TD1Q5T7N2 865 aaKnown RBP16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 LENG9Q96B70 501 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 DDX25Q9UHL0 483 aaKnown RBP16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 DIS3Q9Y2L1 958 aaKnown RBP16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 IGLV3-22A0A075B6J6 115 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 B4DLN1 442 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 STAM2O75886 525 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 CTGFP29279 349 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 ZNF76P36508 570 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 FCGRTP55899 365 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 SP3Q02447 781 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 NIPA1Q7RTP0 329 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 POTEDQ86YR6 584 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 JMYQ8N9B5 988 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 MXRA8Q9BRK3 442 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 UBIAD1Q9Y5Z9 338 aa16.6■□□□□ 0.25
SMPDL3B-201ENST00000373888 ZNFX1Q9P2E3 1918 aaKnown RBP16.59■□□□□ 0.25
SMPDL3B-201ENST00000373888 MEIS1O00470 390 aa16.59■□□□□ 0.25
SMPDL3B-201ENST00000373888 TNPO2O14787 897 aaKnown RBP16.59■□□□□ 0.25
SMPDL3B-201ENST00000373888 PRPHP41219 470 aa16.59■□□□□ 0.25
SMPDL3B-201ENST00000373888 SETQ01105 290 aaPredicted RBP16.59■□□□□ 0.25
SMPDL3B-201ENST00000373888 ARL6IP4Q66PJ3 421 aaKnown RBP16.59■□□□□ 0.25
SMPDL3B-201ENST00000373888 ZNF467Q7Z7K2 595 aaPredicted RBP16.59■□□□□ 0.25
SMPDL3B-201ENST00000373888 DNAJC5GQ8N7S2 189 aa16.59■□□□□ 0.25
SMPDL3B-201ENST00000373888 CYP2W1Q8TAV3 490 aa16.59■□□□□ 0.25
SMPDL3B-201ENST00000373888 MORC4Q8TE76 937 aa16.59■□□□□ 0.25
SMPDL3B-201ENST00000373888 SOCS4Q8WXH5 440 aa16.59■□□□□ 0.25
SMPDL3B-201ENST00000373888 USP6NLQ92738 828 aa16.59■□□□□ 0.25
SMPDL3B-201ENST00000373888 MPHOSPH6Q99547 160 aaKnown RBP16.59■□□□□ 0.25
SMPDL3B-201ENST00000373888 TMEM60Q9H2L4 133 aa16.59■□□□□ 0.25
SMPDL3B-201ENST00000373888 SLC5A4Q9NY91 659 aa16.59■□□□□ 0.25
SMPDL3B-201ENST00000373888 LRRC37A2A6NM11 1700 aa16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 PRPF40AO75400 957 aaKnown RBP16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 HOXC6P09630 235 aa16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 OR52Z1P0C646 297 aa16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 MYCLP12524 364 aaPredicted RBP16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 ITGB5P18084 799 aa16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 MARCKSP29966 332 aaPredicted RBP16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 PSMC4P43686 418 aa16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 MAP2K5Q13163 448 aa16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 STXBP2Q15833 593 aa16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 CALCRLQ16602 461 aa16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 PRR16Q569H4 304 aa16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 DPP9Q86TI2 863 aa16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 MTMR9Q96QG7 549 aa16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 NUDT12Q9BQG2 462 aa16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 KCNMB3Q9NPA1 279 aa16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 JADE2Q9NQC1 790 aa16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 FBXO2Q9UK22 296 aaPredicted RBP16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 GJD2Q9UKL4 321 aa16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 MRVI1Q9Y6F6 885 aa16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 MGAMO43451 1857 aa16.58■□□□□ 0.24
SMPDL3B-201ENST00000373888 ASB14A6NK59 587 aa16.57■□□□□ 0.24
SMPDL3B-201ENST00000373888 GPR25O00155 361 aa16.57■□□□□ 0.24
SMPDL3B-201ENST00000373888 TBX3O15119 743 aa16.57■□□□□ 0.24
SMPDL3B-201ENST00000373888 EIF3JO75822 258 aaKnown RBP16.57■□□□□ 0.24
SMPDL3B-201ENST00000373888 ME1P48163 572 aa16.57■□□□□ 0.24
SMPDL3B-201ENST00000373888 KIF22Q14807 665 aa16.57■□□□□ 0.24
SMPDL3B-201ENST00000373888 PLA2G4DQ86XP0 818 aa16.57■□□□□ 0.24
SMPDL3B-201ENST00000373888 KRI1Q8N9T8 703 aaKnown RBP16.57■□□□□ 0.24
SMPDL3B-201ENST00000373888 ETNPPLQ8TBG4 499 aa16.57■□□□□ 0.24
SMPDL3B-201ENST00000373888 HAS1Q92839 578 aa16.57■□□□□ 0.24
SMPDL3B-201ENST00000373888 FERMT2Q96AC1 680 aa16.57■□□□□ 0.24
SMPDL3B-201ENST00000373888 TRIM47Q96LD4 638 aa16.57■□□□□ 0.24
SMPDL3B-201ENST00000373888 INPP4AQ96PE3 977 aaPredicted RBP16.57■□□□□ 0.24
SMPDL3B-201ENST00000373888 ARHGAP39Q9C0H5 1083 aa16.57■□□□□ 0.24
SMPDL3B-201ENST00000373888 PCDHA7Q9UN72 937 aa16.57■□□□□ 0.24
SMPDL3B-201ENST00000373888 SRPRBQ9Y5M8 271 aaKnown RBP16.57■□□□□ 0.24
SMPDL3B-201ENST00000373888 PLXNA1Q9UIW2 1896 aa16.57■□□□□ 0.24
SMPDL3B-201ENST00000373888 RGS2P41220 211 aa16.56■□□□□ 0.24
SMPDL3B-201ENST00000373888 PDE4DQ08499 809 aa16.56■□□□□ 0.24
SMPDL3B-201ENST00000373888 AXDND1Q5T1B0 1012 aaPredicted RBP16.56■□□□□ 0.24
SMPDL3B-201ENST00000373888 MAMDC4Q6UXC1 1216 aa16.56■□□□□ 0.24
SMPDL3B-201ENST00000373888 GPRASP2Q96D09 838 aa16.56■□□□□ 0.24
SMPDL3B-201ENST00000373888 MAML3Q96JK9 1138 aa16.56■□□□□ 0.24
SMPDL3B-201ENST00000373888 ZFP91Q96JP5 570 aaPredicted RBP16.56■□□□□ 0.24
SMPDL3B-201ENST00000373888 BEGAINQ9BUH8 593 aa16.56■□□□□ 0.24
SMPDL3B-201ENST00000373888 MSH4O15457 936 aa16.55■□□□□ 0.24
SMPDL3B-201ENST00000373888 MAFGO15525 162 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms