RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 VCX3AQ9NNX9 186 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 RBM6P78332 1123 aaKnown RBP10.76□□□□□ -0.69
TRERF1-204ENST00000372922 RAB44Q7Z6P3 723 aaPredicted RBP10.76□□□□□ -0.69
TRERF1-204ENST00000372922 SYMPKQ92797 1274 aaKnown RBP10.76□□□□□ -0.69
TRERF1-204ENST00000372922 STK17AQ9UEE5 414 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 FBXO2Q9UK22 296 aaPredicted RBP10.76□□□□□ -0.69
TRERF1-204ENST00000372922 DALRD3Q5D0E6 543 aaKnown RBP10.76□□□□□ -0.69
TRERF1-204ENST00000372922 RFX6Q8HWS3 928 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 FAM8A1Q9UBU6 413 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 ZNF148Q9UQR1 794 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 RIPOR2Q9Y4F9 1068 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 NEO1Q92859 1461 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 MED7O43513 233 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 SPATA1Q5VX52 437 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 RNF10Q8N5U6 811 aaKnown RBP10.76□□□□□ -0.69
TRERF1-204ENST00000372922 NLRP7Q8WX94 980 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 GCNAQ96QF7 691 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 BAIAP2L1Q9UHR4 511 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 BUB1O43683 1085 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 BMP3P12645 472 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 PTH1RQ03431 593 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 KCTD1Q719H9 257 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 HDAC11Q96DB2 347 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 PTPRTO14522 1441 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 GOLGA8QA0A0J9YX86 632 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 GOLGA8OA6NCC3 632 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 GOLGA8NF8WBI6 632 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 TSTA3Q13630 321 aaPredicted RBP10.76□□□□□ -0.69
TRERF1-204ENST00000372922 TTBK2Q6IQ55 1244 aa10.76□□□□□ -0.69
TRERF1-204ENST00000372922 ABT1Q9ULW3 272 aaKnown RBP10.76□□□□□ -0.69
TRERF1-204ENST00000372922 PASKQ96RG2 1323 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 SAT1P21673 171 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 ELF2Q15723 593 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 MUM1Q2TAK8 710 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 GJA10Q969M2 543 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 TMEM206Q9H813 350 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 ANGPTL3Q9Y5C1 460 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 MAD1L1Q9Y6D9 718 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 PZPP20742 1482 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 ADGBQ8N7X0 1667 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 GUCY2FP51841 1108 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 FOXP1Q9H334 677 aaPredicted RBP10.75□□□□□ -0.69
TRERF1-204ENST00000372922 SLC8A2Q9UPR5 921 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 TCP1P17987 556 aaKnown RBP10.75□□□□□ -0.69
TRERF1-204ENST00000372922 MX2P20592 715 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 RTKN2Q8IZC4 609 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 ZNF280CQ8ND82 737 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 FAM71BQ8TC56 605 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 LARP4BQ92615 738 aaKnown RBP10.75□□□□□ -0.69
TRERF1-204ENST00000372922 DBNDD1Q9H9R9 158 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 SLC38A10Q9HBR0 1119 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 KLHL14Q9P2G3 628 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 PNMA3Q9UL41 463 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 FAM170AA1A519 330 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 BTBD18B2RXH4 712 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 MYO1FO00160 1098 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 PNMA8AQ86V59 439 aaPredicted RBP10.75□□□□□ -0.69
TRERF1-204ENST00000372922 PARD3BQ8TEW8 1205 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 COPRSQ9NQ92 184 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 MYO1EQ12965 1108 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 SYDE2Q5VT97 1194 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 PI4K2BQ8TCG2 481 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 ANXA13P27216 316 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 ERFEQ4G0M1 354 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 JADE1Q6IE81 842 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 NUDCD3Q8IVD9 361 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 USP28Q96RU2 1077 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 RNF26Q9BY78 433 aaPredicted RBP10.75□□□□□ -0.69
TRERF1-204ENST00000372922 MRPL46Q9H2W6 279 aaKnown RBP10.75□□□□□ -0.69
TRERF1-204ENST00000372922 PI4KBQ9UBF8 816 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 ASAP1Q9ULH1 1129 aa10.75□□□□□ -0.69
TRERF1-204ENST00000372922 Q3C1V9 767 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.74□□□□□ -0.69
TRERF1-204ENST00000372922 EFCC1Q9HA90 598 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.74□□□□□ -0.69
TRERF1-204ENST00000372922 SERPINB13Q9UIV8 391 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 FMNL1O95466 1100 aaPredicted RBP10.74□□□□□ -0.69
TRERF1-204ENST00000372922 SURF1Q15526 300 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 CEP170P1Q96L14 293 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 LOC102724159A0A0B4J2E5 919 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 USP17L3A6NCW0 530 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 USP17L4A6NCW7 530 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 ARHGAP42A6NI28 874 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 GOLGA8KD6RF30 607 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 F8W8V4 182 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 PSAPP07602 524 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 PDIA3P30101 505 aaKnown RBP10.74□□□□□ -0.69
TRERF1-204ENST00000372922 PWP2Q15269 919 aaKnown RBP10.74□□□□□ -0.69
TRERF1-204ENST00000372922 USP17L1Q7RTZ2 530 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 FAM160B2Q86V87 743 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 EFCAB13Q8IY85 973 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 NPR1P16066 1061 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 ADORA1P30542 326 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 BRD3Q15059 726 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 SLC10A4Q96EP9 437 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 CAPN7Q9Y6W3 813 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 TMEM94Q12767 1356 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 BRD1O95696 1058 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 RAPH1Q70E73 1250 aa10.74□□□□□ -0.69
TRERF1-204ENST00000372922 CNOT6LQ96LI5 555 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms