RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 TMED5Q9Y3A6 229 aa11.66□□□□□ -0.54
TRERF1-203ENST00000372917 SRRM3A6NNA2 597 aaPredicted RBP11.65□□□□□ -0.54
TRERF1-203ENST00000372917 BTBD11A6QL63 1104 aa11.65□□□□□ -0.54
TRERF1-203ENST00000372917 PFKFB1P16118 471 aa11.65□□□□□ -0.54
TRERF1-203ENST00000372917 MARCKSP29966 332 aaPredicted RBP11.65□□□□□ -0.54
TRERF1-203ENST00000372917 POTEEQ6S8J3 1075 aa11.65□□□□□ -0.54
TRERF1-203ENST00000372917 DAAM2Q86T65 1068 aa11.65□□□□□ -0.54
TRERF1-203ENST00000372917 TMTC1Q8IUR5 882 aa11.65□□□□□ -0.54
TRERF1-203ENST00000372917 PEX5LQ8IYB4 626 aa11.65□□□□□ -0.54
TRERF1-203ENST00000372917 HELBQ8NG08 1087 aaPredicted RBP11.65□□□□□ -0.54
TRERF1-203ENST00000372917 CHMP6Q96FZ7 201 aa11.65□□□□□ -0.54
TRERF1-203ENST00000372917 TUBA8Q9NY65 449 aaPredicted RBP11.65□□□□□ -0.54
TRERF1-203ENST00000372917 WWC3Q9ULE0 1092 aa11.65□□□□□ -0.54
TRERF1-203ENST00000372917 LUC7L2Q9Y383 392 aaKnown RBP11.65□□□□□ -0.54
TRERF1-203ENST00000372917 LRRC42Q9Y546 428 aa11.65□□□□□ -0.54
TRERF1-203ENST00000372917 MLH3Q9UHC1 1453 aa11.65□□□□□ -0.54
TRERF1-203ENST00000372917 NPHP4O75161 1426 aaPredicted RBP11.65□□□□□ -0.54
TRERF1-203ENST00000372917 UNCXA6NJT0 531 aa11.65□□□□□ -0.54
TRERF1-203ENST00000372917 C6orf183Q5T699 404 aa11.65□□□□□ -0.54
TRERF1-203ENST00000372917 CEP295NLQ96MC4 621 aa11.65□□□□□ -0.54
TRERF1-203ENST00000372917 DRC3Q9H069 523 aa11.65□□□□□ -0.54
TRERF1-203ENST00000372917 NOVA2Q9UNW9 492 aaKnown RBP11.65□□□□□ -0.54
TRERF1-203ENST00000372917 TDRKHQ9Y2W6 561 aaKnown RBP11.65□□□□□ -0.54
TRERF1-203ENST00000372917 CD2APQ9Y5K6 639 aa11.65□□□□□ -0.54
TRERF1-203ENST00000372917 SPTLC2O15270 562 aa11.65□□□□□ -0.55
TRERF1-203ENST00000372917 PDE4BQ07343 736 aa11.65□□□□□ -0.55
TRERF1-203ENST00000372917 SESTD1Q86VW0 696 aa11.65□□□□□ -0.55
TRERF1-203ENST00000372917 CNGA4Q8IV77 575 aa11.65□□□□□ -0.55
TRERF1-203ENST00000372917 PI4K2BQ8TCG2 481 aa11.65□□□□□ -0.55
TRERF1-203ENST00000372917 USP44Q9H0E7 712 aa11.65□□□□□ -0.55
TRERF1-203ENST00000372917 SMARCAL1Q9NZC9 954 aa11.65□□□□□ -0.55
TRERF1-203ENST00000372917 HEY1Q9Y5J3 304 aa11.65□□□□□ -0.55
TRERF1-203ENST00000372917 STK24Q9Y6E0 443 aa11.65□□□□□ -0.55
TRERF1-203ENST00000372917 MACROD2A1Z1Q3 448 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 SPTLC1O15269 473 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 MAGEB3O15480 346 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 MFAP3LO75121 409 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 DRD4P21917 467 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 SERPINB3P29508 390 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 ADARP55265 1226 aaKnown RBP11.64□□□□□ -0.55
TRERF1-203ENST00000372917 NCALDP61601 193 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 CCDC6Q16204 474 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 DUS1LQ6P1R4 473 aaKnown RBP11.64□□□□□ -0.55
TRERF1-203ENST00000372917 IQCKQ8N0W5 287 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 FAM133AQ8N9E0 248 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 SLC43A3Q8NBI5 491 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.64□□□□□ -0.55
TRERF1-203ENST00000372917 DDX50Q9BQ39 737 aaKnown RBP11.64□□□□□ -0.55
TRERF1-203ENST00000372917 TRPV5Q9NQA5 729 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 MRGBPQ9NV56 204 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 CLIC4Q9Y696 253 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 TMEM110-MUSTN1A8MSY1 372 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 ATP9BO43861 1147 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 UBTFL6P0CB48 400 aaPredicted RBP11.64□□□□□ -0.55
TRERF1-203ENST00000372917 ZCCHC18P0CG32 403 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 CARSP49589 748 aaKnown RBP11.64□□□□□ -0.55
TRERF1-203ENST00000372917 PPP2R2AP63151 447 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 HLTFQ14527 1009 aaKnown RBP eCLIP11.64□□□□□ -0.55
TRERF1-203ENST00000372917 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.64□□□□□ -0.55
TRERF1-203ENST00000372917 KLHL10Q6JEL2 608 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 IRGCQ6NXR0 463 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 PDCD7Q8N8D1 485 aaKnown RBP11.64□□□□□ -0.55
TRERF1-203ENST00000372917 MDM1Q8TC05 714 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 LENG1Q96BZ8 264 aaPredicted RBP11.64□□□□□ -0.55
TRERF1-203ENST00000372917 A0A0J9YVX5 310 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 MAGEA13PA6NCF6 341 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 TRIM29Q14134 588 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 KRT32Q14532 448 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 ZNF827Q17R98 1081 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 SLC2A7Q6PXP3 512 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 CYP4X1Q8N118 509 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 PTPRN2Q92932 1015 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 NDEL1Q9GZM8 345 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 CIDEBQ9UHD4 219 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 TRIM33Q9UPN9 1127 aa11.64□□□□□ -0.55
TRERF1-203ENST00000372917 A0A1W2PQ27 194 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 A0A1W2PQ64 194 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 A0A1W2PQD8 194 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 C5orf60A6NFR6 353 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 ITGA2BP08514 1039 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 LMNB1P20700 586 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 VARSP26640 1264 aaKnown RBP11.63□□□□□ -0.55
TRERF1-203ENST00000372917 KIF5AQ12840 1032 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 IFT20Q8IY31 132 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 SIX5Q8N196 739 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 NSUN7Q8NE18 718 aaKnown RBP11.63□□□□□ -0.55
TRERF1-203ENST00000372917 RNF25Q96BH1 459 aaPredicted RBP11.63□□□□□ -0.55
TRERF1-203ENST00000372917 DYDC2Q96IM9 177 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 EPB41L5Q9HCM4 733 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 GPHNQ9NQX3 736 aaPredicted RBP11.63□□□□□ -0.55
TRERF1-203ENST00000372917 CTTNBP2NLQ9P2B4 639 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 F8W031 263 aaPredicted RBP11.63□□□□□ -0.55
TRERF1-203ENST00000372917 TIMM44O43615 452 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 GALK1P51570 392 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 TOB2Q14106 344 aaPredicted RBP11.63□□□□□ -0.55
TRERF1-203ENST00000372917 KRT27Q7Z3Y8 459 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 NUTM2AQ8IVF1 878 aaPredicted RBP11.63□□□□□ -0.55
TRERF1-203ENST00000372917 PUS3Q9BZE2 481 aaKnown RBP11.63□□□□□ -0.55
TRERF1-203ENST00000372917 SLC7A5P2Q9GIP4 190 aa11.63□□□□□ -0.55
TRERF1-203ENST00000372917 CHPF2Q9P2E5 772 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms