RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 HAUS2Q9NVX0 235 aa13.22□□□□□ -0.29
SNX21-205ENST00000372547 CEP83Q9Y592 693 aa13.22□□□□□ -0.29
SNX21-205ENST00000372547 A0A1W2PQJ5 194 aa13.22□□□□□ -0.29
SNX21-205ENST00000372547 GOLGA8HP0CJ92 632 aa13.22□□□□□ -0.29
SNX21-205ENST00000372547 ITIH3Q06033 890 aa13.22□□□□□ -0.29
SNX21-205ENST00000372547 CHRNDQ07001 517 aa13.22□□□□□ -0.29
SNX21-205ENST00000372547 SPRED3Q2MJR0 410 aa13.22□□□□□ -0.29
SNX21-205ENST00000372547 GDF3Q9NR23 364 aa13.22□□□□□ -0.29
SNX21-205ENST00000372547 PCDHA6Q9UN73 950 aa13.22□□□□□ -0.29
SNX21-205ENST00000372547 PCDHA8Q9Y5H6 950 aa13.22□□□□□ -0.29
SNX21-205ENST00000372547 DISP2A7MBM2 1401 aa13.22□□□□□ -0.29
SNX21-205ENST00000372547 GCOM1H8Y6P7 765 aaPredicted RBP13.21□□□□□ -0.29
SNX21-205ENST00000372547 FAM107AO95990 144 aa13.21□□□□□ -0.29
SNX21-205ENST00000372547 MYZAPP0CAP1 466 aa13.21□□□□□ -0.29
SNX21-205ENST00000372547 QPCTQ16769 361 aa13.21□□□□□ -0.29
SNX21-205ENST00000372547 SPATS2Q86XZ4 545 aaKnown RBP13.21□□□□□ -0.29
SNX21-205ENST00000372547 RIOK1Q9BRS2 568 aaKnown RBP13.21□□□□□ -0.29
SNX21-205ENST00000372547 AP1M1Q9BXS5 423 aa13.21□□□□□ -0.29
SNX21-205ENST00000372547 SLAIN2Q9P270 581 aa13.21□□□□□ -0.29
SNX21-205ENST00000372547 ANAPC4Q9UJX5 808 aa13.21□□□□□ -0.29
SNX21-205ENST00000372547 ODF2LQ9ULJ1 636 aa13.21□□□□□ -0.29
SNX21-205ENST00000372547 SIK3Q9Y2K2 1263 aa13.21□□□□□ -0.29
SNX21-205ENST00000372547 KCNK3O14649 394 aa13.21□□□□□ -0.29
SNX21-205ENST00000372547 KLRC1P26715 233 aa13.21□□□□□ -0.29
SNX21-205ENST00000372547 CTNNA1P35221 906 aaKnown RBP13.21□□□□□ -0.29
SNX21-205ENST00000372547 TXKP42681 527 aa13.21□□□□□ -0.29
SNX21-205ENST00000372547 CDK17Q00537 523 aa13.21□□□□□ -0.29
SNX21-205ENST00000372547 ITGB3BPQ13352 177 aaPredicted RBP13.21□□□□□ -0.29
SNX21-205ENST00000372547 NEDD9Q14511 834 aa13.21□□□□□ -0.29
SNX21-205ENST00000372547 SUSD4Q5VX71 490 aa13.21□□□□□ -0.29
SNX21-205ENST00000372547 ZNF572Q7Z3I7 529 aaPredicted RBP13.21□□□□□ -0.29
SNX21-205ENST00000372547 TBC1D5Q92609 795 aa13.21□□□□□ -0.29
SNX21-205ENST00000372547 UIMC1Q96RL1 719 aa13.21□□□□□ -0.29
SNX21-205ENST00000372547 PACSIN1Q9BY11 444 aa13.21□□□□□ -0.29
SNX21-205ENST00000372547 RPSAP08865 295 aaKnown RBP13.2□□□□□ -0.3
SNX21-205ENST00000372547 KIF5BP33176 963 aa13.2□□□□□ -0.3
SNX21-205ENST00000372547 KIAA0753Q2KHM9 967 aa13.2□□□□□ -0.3
SNX21-205ENST00000372547 CNNM4Q6P4Q7 775 aa13.2□□□□□ -0.3
SNX21-205ENST00000372547 ZSCAN29Q8IWY8 852 aaPredicted RBP13.2□□□□□ -0.3
SNX21-205ENST00000372547 GLIS3Q8NEA6 775 aa13.2□□□□□ -0.3
SNX21-205ENST00000372547 HMGB1P1B2RPK0 211 aaPredicted RBP13.2□□□□□ -0.3
SNX21-205ENST00000372547 PSEN1P49768 467 aa13.2□□□□□ -0.3
SNX21-205ENST00000372547 POLR2FP61218 127 aaKnown RBP13.2□□□□□ -0.3
SNX21-205ENST00000372547 RAPGEF1Q13905 1077 aa13.2□□□□□ -0.3
SNX21-205ENST00000372547 GLE1Q53GS7 698 aaKnown RBP13.2□□□□□ -0.3
SNX21-205ENST00000372547 TIAM2Q8IVF5 1701 aa13.2□□□□□ -0.3
SNX21-205ENST00000372547 RUBCNQ92622 972 aa13.2□□□□□ -0.3
SNX21-205ENST00000372547 VAT1LQ9HCJ6 419 aa13.2□□□□□ -0.3
SNX21-205ENST00000372547 DDX20Q9UHI6 824 aaKnown RBP13.2□□□□□ -0.3
SNX21-205ENST00000372547 ADAMTS1Q9UHI8 967 aa13.2□□□□□ -0.3
SNX21-205ENST00000372547 OPLAHO14841 1288 aa13.2□□□□□ -0.3
SNX21-205ENST00000372547 MYCNP04198 464 aaPredicted RBP13.2□□□□□ -0.3
SNX21-205ENST00000372547 SMTNP53814 917 aa13.2□□□□□ -0.3
SNX21-205ENST00000372547 MAN2A1Q16706 1144 aa13.2□□□□□ -0.3
SNX21-205ENST00000372547 FIGNQ5HY92 759 aa13.2□□□□□ -0.3
SNX21-205ENST00000372547 CCDC84Q86UT8 332 aaPredicted RBP13.2□□□□□ -0.3
SNX21-205ENST00000372547 TAF4BQ92750 862 aa13.2□□□□□ -0.3
SNX21-205ENST00000372547 CCSER1Q9C0I3 900 aa13.2□□□□□ -0.3
SNX21-205ENST00000372547 TBC1D7Q9P0N9 293 aa13.2□□□□□ -0.3
SNX21-205ENST00000372547 GMNCA6NCL1 334 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 DNM1LO00429 736 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 CEP104O60308 925 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 ELF1P32519 619 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 HSD17B3P37058 310 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 TFAP4Q01664 338 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 DDR1Q08345 913 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 SNCBQ16143 134 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 SLC9C1Q4G0N8 1177 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 PDXDC1Q6P996 788 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 PNMA1Q8ND90 353 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 TBC1D31Q96DN5 1066 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 CDK5RAP3Q96JB5 506 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 TRIM31Q9BZY9 425 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 DONSONQ9NYP3 566 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 STX8Q9UNK0 236 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 NOVA2Q9UNW9 492 aaKnown RBP13.19□□□□□ -0.3
SNX21-205ENST00000372547 PHF20L1A8MW92 1017 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 TMCO5BA8MYB1 307 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 AMPD3Q01432 767 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 CYB5D1Q6P9G0 228 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 CPLX4Q7Z7G2 160 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 PARP9Q8IXQ6 854 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 BAP1Q92560 729 aa13.19□□□□□ -0.3
SNX21-205ENST00000372547 DCDC2CA8MYV0 355 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 MYL1P05976 194 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 OR52Z1P0C646 297 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 TNFRSF8P28908 595 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 ERVK-9P63128 1117 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 TNNC1P63316 161 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 SFMBT2Q5VUG0 894 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 SV2BQ7L1I2 683 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 FAM133AQ8N9E0 248 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 WHAMMQ8TF30 809 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 CALML4Q96GE6 196 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 LSM14BQ9BX40 385 aaKnown RBP13.18□□□□□ -0.3
SNX21-205ENST00000372547 OSBPL7Q9BZF2 842 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 TMBIM4Q9HC24 238 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 MCM9Q9NXL9 1143 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 USP17L3A6NCW0 530 aa13.18□□□□□ -0.3
SNX21-205ENST00000372547 USP17L4A6NCW7 530 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms