RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 LAD1O00515 517 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 CCNE1P24864 410 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 PTPROQ16827 1216 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 CCDC122Q5T0U0 273 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 GPATCH4Q5T3I0 446 aaKnown RBP13.09□□□□□ -0.31
PDE6C-201ENST00000371447 CNNM4Q6P4Q7 775 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 HHIPL2Q6UWX4 724 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 DEFB132Q7Z7B7 95 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 GPBP1Q86WP2 473 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 AKT1S1Q96B36 256 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 ANO3Q9BYT9 981 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 DEF6Q9H4E7 631 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 RIC8AQ9NPQ8 531 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 PHLPP2Q6ZVD8 1323 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 A0A1W2PRG0 241 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 SPDYE3A6NKU9 549 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 EPHB6O15197 1021 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 PRPHP41219 470 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 PSMC6P62333 389 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 PLS1Q14651 629 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 KCTD19Q17RG1 926 aaPredicted RBP13.09□□□□□ -0.31
PDE6C-201ENST00000371447 AK8Q96MA6 479 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 GDAP1L1Q96MZ0 367 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 MTMR9Q96QG7 549 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 P2RX7Q99572 595 aaKnown RBP13.09□□□□□ -0.31
PDE6C-201ENST00000371447 HOMER2Q9NSB8 354 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 ZNHIT6Q9NWK9 470 aaKnown RBP13.09□□□□□ -0.31
PDE6C-201ENST00000371447 ZNF446Q9NWS9 450 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 KLRG2A4D1S0 409 aaPredicted RBP13.08□□□□□ -0.31
PDE6C-201ENST00000371447 IPO7O95373 1038 aaKnown RBP13.08□□□□□ -0.31
PDE6C-201ENST00000371447 CCDC93Q567U6 631 aa13.08□□□□□ -0.31
PDE6C-201ENST00000371447 FKBP15Q5T1M5 1219 aa13.08□□□□□ -0.31
PDE6C-201ENST00000371447 IPO4Q8TEX9 1081 aaKnown RBP13.08□□□□□ -0.31
PDE6C-201ENST00000371447 SH2D3AQ9BRG2 576 aa13.08□□□□□ -0.31
PDE6C-201ENST00000371447 PLEKHA4Q9H4M7 779 aa13.08□□□□□ -0.31
PDE6C-201ENST00000371447 PANK4Q9NVE7 773 aa13.08□□□□□ -0.31
PDE6C-201ENST00000371447 DGKZQ13574 1117 aa13.08□□□□□ -0.32
PDE6C-201ENST00000371447 RRAGAQ7L523 313 aa13.08□□□□□ -0.32
PDE6C-201ENST00000371447 SIAH1Q8IUQ4 282 aa13.08□□□□□ -0.32
PDE6C-201ENST00000371447 TMTC1Q8IUR5 882 aa13.08□□□□□ -0.32
PDE6C-201ENST00000371447 ZDHHC15Q96MV8 337 aa13.08□□□□□ -0.32
PDE6C-201ENST00000371447 TMEM39BQ9GZU3 492 aa13.08□□□□□ -0.32
PDE6C-201ENST00000371447 IKZF4Q9H2S9 585 aa13.08□□□□□ -0.32
PDE6C-201ENST00000371447 FBXO28Q9NVF7 368 aa13.08□□□□□ -0.32
PDE6C-201ENST00000371447 CTAGE9A4FU28 777 aa13.08□□□□□ -0.32
PDE6C-201ENST00000371447 YDJCA8MPS7 323 aa13.08□□□□□ -0.32
PDE6C-201ENST00000371447 NDUFA10O95299 355 aa13.08□□□□□ -0.32
PDE6C-201ENST00000371447 FAM83BQ5T0W9 1011 aa13.08□□□□□ -0.32
PDE6C-201ENST00000371447 STRIP1Q5VSL9 837 aa13.08□□□□□ -0.32
PDE6C-201ENST00000371447 TMCO3Q6UWJ1 677 aa13.08□□□□□ -0.32
PDE6C-201ENST00000371447 TMC4Q7Z404 712 aa13.08□□□□□ -0.32
PDE6C-201ENST00000371447 FBXO11Q86XK2 927 aa13.08□□□□□ -0.32
PDE6C-201ENST00000371447 PIGOQ8TEQ8 1089 aa13.08□□□□□ -0.32
PDE6C-201ENST00000371447 RAD54LQ92698 747 aa13.08□□□□□ -0.32
PDE6C-201ENST00000371447 RGL1Q9NZL6 768 aa13.08□□□□□ -0.32
PDE6C-201ENST00000371447 BICDL2A1A5D9 508 aa13.07□□□□□ -0.32
PDE6C-201ENST00000371447 ZBTB39O15060 712 aa13.07□□□□□ -0.32
PDE6C-201ENST00000371447 ZMYND10O75800 440 aa13.07□□□□□ -0.32
PDE6C-201ENST00000371447 MATR3P43243 847 aaKnown RBP eCLIP13.07□□□□□ -0.32
PDE6C-201ENST00000371447 TDRD12Q587J7 1177 aaKnown RBP13.07□□□□□ -0.32
PDE6C-201ENST00000371447 DNAAF5Q86Y56 855 aa13.07□□□□□ -0.32
PDE6C-201ENST00000371447 CPXCR1Q8N123 301 aa13.07□□□□□ -0.32
PDE6C-201ENST00000371447 TMOD2Q9NZR1 351 aa13.07□□□□□ -0.32
PDE6C-201ENST00000371447 ZBTB21Q9ULJ3 1066 aa13.07□□□□□ -0.32
PDE6C-201ENST00000371447 KIAA1551Q9HCM1 1747 aa13.07□□□□□ -0.32
PDE6C-201ENST00000371447 SHTN1A0MZ66 631 aa13.07□□□□□ -0.32
PDE6C-201ENST00000371447 RXRBP28702 533 aa13.07□□□□□ -0.32
PDE6C-201ENST00000371447 ARHGAP4P98171 946 aa13.07□□□□□ -0.32
PDE6C-201ENST00000371447 KCNB1Q14721 858 aa13.07□□□□□ -0.32
PDE6C-201ENST00000371447 CACNA2D4Q7Z3S7 1137 aa13.07□□□□□ -0.32
PDE6C-201ENST00000371447 DHTKD1Q96HY7 919 aaPredicted RBP13.07□□□□□ -0.32
PDE6C-201ENST00000371447 GLIS2Q9BZE0 524 aaPredicted RBP13.07□□□□□ -0.32
PDE6C-201ENST00000371447 IGKV6D-41A0A0C4DH26 115 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 GOLGA6L9A6NEM1 432 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 TADA3O75528 432 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 TCERG1LQ5VWI1 586 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 OGFOD1Q8N543 542 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 C7orf25Q9BPX7 421 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.06□□□□□ -0.322e-28■■■■■ 354
PDE6C-201ENST00000371447 BCS1LQ9Y276 419 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 MED24O75448 989 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 PLA2G4BP0C869 781 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 KCNJ6P48051 423 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 DNM2P50570 870 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 CHMP4BP1P59074 171 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 CCDC17Q96LX7 622 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 LACRTQ9GZZ8 138 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 CASZ1Q86V15 1759 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 LRRC10BA6NIK2 292 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 SNHG28P0DPA3 235 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 BMP3P12645 472 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 EEF1GP26641 437 aaKnown RBP13.06□□□□□ -0.32
PDE6C-201ENST00000371447 EPS15P42566 896 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 COASYQ13057 564 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 CTTNQ14247 550 aaKnown RBP13.06□□□□□ -0.32
PDE6C-201ENST00000371447 DLGAP5Q15398 846 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 FAM26FQ5R3K3 315 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 ZNF771Q7L3S4 317 aaPredicted RBP13.06□□□□□ -0.32
PDE6C-201ENST00000371447 KSR1Q8IVT5 923 aa13.06□□□□□ -0.32
PDE6C-201ENST00000371447 TPH2Q8IWU9 490 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms