RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 AP3B2Q13367 1082 aa16.13■□□□□ 0.17
NDC1-201ENST00000371429 CCDC6Q16204 474 aa16.13■□□□□ 0.17
NDC1-201ENST00000371429 BARGINQ6ZT62 677 aa16.13■□□□□ 0.17
NDC1-201ENST00000371429 TMTC3Q6ZXV5 915 aa16.13■□□□□ 0.17
NDC1-201ENST00000371429 RSRC2Q7L4I2 434 aaKnown RBP16.13■□□□□ 0.17
NDC1-201ENST00000371429 METTL23Q86XA0 190 aa16.13■□□□□ 0.17
NDC1-201ENST00000371429 CACTINQ8WUQ7 758 aaKnown RBP16.13■□□□□ 0.17
NDC1-201ENST00000371429 AIFM3Q96NN9 605 aa16.13■□□□□ 0.17
NDC1-201ENST00000371429 FAM49AQ9H0Q0 323 aaPredicted RBP16.13■□□□□ 0.17
NDC1-201ENST00000371429 PRDM10Q9NQV6 1147 aa16.13■□□□□ 0.17
NDC1-201ENST00000371429 RAB20Q9NX57 234 aa16.13■□□□□ 0.17
NDC1-201ENST00000371429 ABCD1P33897 745 aa16.12■□□□□ 0.17
NDC1-201ENST00000371429 CNOT6LQ96LI5 555 aaKnown RBP16.12■□□□□ 0.17
NDC1-201ENST00000371429 PPP1R16BQ96T49 567 aa16.12■□□□□ 0.17
NDC1-201ENST00000371429 OATP04181 439 aa16.12■□□□□ 0.17
NDC1-201ENST00000371429 H2AFZP0C0S5 128 aa16.12■□□□□ 0.17
NDC1-201ENST00000371429 MFAP3P55082 362 aa16.12■□□□□ 0.17
NDC1-201ENST00000371429 H2AFVQ71UI9 128 aa16.12■□□□□ 0.17
NDC1-201ENST00000371429 SMC1BQ8NDV3 1235 aa16.12■□□□□ 0.17
NDC1-201ENST00000371429 CEP95Q96GE4 821 aa16.12■□□□□ 0.17
NDC1-201ENST00000371429 GIPC1O14908 333 aa16.12■□□□□ 0.17
NDC1-201ENST00000371429 PSMC4P43686 418 aa16.12■□□□□ 0.17
NDC1-201ENST00000371429 RCSD1Q6JBY9 416 aa16.12■□□□□ 0.17
NDC1-201ENST00000371429 TBC1D16Q8TBP0 767 aa16.12■□□□□ 0.17
NDC1-201ENST00000371429 PARVGQ9HBI0 331 aa16.12■□□□□ 0.17
NDC1-201ENST00000371429 SPHKAPQ2M3C7 1700 aa16.12■□□□□ 0.17
NDC1-201ENST00000371429 SLFN14P0C7P3 912 aa16.12■□□□□ 0.17
NDC1-201ENST00000371429 PDZD4Q76G19 769 aaPredicted RBP16.12■□□□□ 0.17
NDC1-201ENST00000371429 DHTKD1Q96HY7 919 aaPredicted RBP16.12■□□□□ 0.17
NDC1-201ENST00000371429 UNC13BO14795 1591 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 SRGAP2CP0DJJ0 459 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 NFX1Q12986 1120 aaKnown RBP16.11■□□□□ 0.17
NDC1-201ENST00000371429 TBC1D10CQ8IV04 446 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 TUBGCP2Q9BSJ2 902 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 PCIF1Q9H4Z3 704 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 RIC8AQ9NPQ8 531 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 RNF146Q9NTX7 359 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 FOXO4P98177 505 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 FKBP3Q00688 224 aaKnown RBP16.11■□□□□ 0.17
NDC1-201ENST00000371429 CARD6Q9BX69 1037 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 PCDHB4Q9Y5E5 795 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 UBN2Q6ZU65 1347 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 LONRF2Q1L5Z9 754 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 LINC00301Q8NCQ3 95 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 RSAD2Q8WXG1 361 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 NLRP4Q96MN2 994 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 SNX25Q9H3E2 840 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 SYNJ2BP-COX16A0A087WUM0 186 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 PLA2G4BP0C869 781 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 HDXQ7Z353 690 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 CPVLQ9H3G5 476 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 COX16Q9P0S2 106 aa16.11■□□□□ 0.17
NDC1-201ENST00000371429 SPATA31A5Q5VU36 1347 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 SPATA31A7Q8IWB4 1347 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 F5H6K3 240 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 CLIC2O15247 247 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 KLRC3Q07444 240 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 NSUN6Q8TEA1 469 aaKnown RBP16.1■□□□□ 0.17
NDC1-201ENST00000371429 P2RX5Q93086 422 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 HERC5Q9UII4 1024 aaKnown RBP16.1■□□□□ 0.17
NDC1-201ENST00000371429 MYL3P08590 195 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 PTPREP23469 700 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 OSTNP61366 133 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 CTTNQ14247 550 aaKnown RBP16.1■□□□□ 0.17
NDC1-201ENST00000371429 ZBTB33Q86T24 672 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 LINC00116Q8NCU8 138 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 FAM149B1Q96BN6 582 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 ERO1AQ96HE7 468 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 PCDHA6Q9UN73 950 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 SUGT1Q9Y2Z0 365 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 PCDHB6Q9Y5E3 794 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 PCDHA8Q9Y5H6 950 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 GRIN3BO60391 1043 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 CSPG5O95196 566 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 MICALL2Q8IY33 904 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 TRERF1Q96PN7 1200 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 CALCOCO1Q9P1Z2 691 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 K7ERI5 159 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 COPB1P53618 953 aaKnown RBP16.1■□□□□ 0.17
NDC1-201ENST00000371429 MTMR1Q13613 665 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 LGSNQ5TDP6 509 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 PRPF38AQ8NAV1 312 aaKnown RBP16.1■□□□□ 0.17
NDC1-201ENST00000371429 TRIM58Q8NG06 486 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 BHMT2Q9H2M3 363 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 SH3GLB2Q9NR46 395 aa16.1■□□□□ 0.17
NDC1-201ENST00000371429 CNOT7Q9UIV1 285 aaKnown RBP16.1■□□□□ 0.17
NDC1-201ENST00000371429 ARHGEF37A1IGU5 675 aa16.09■□□□□ 0.17
NDC1-201ENST00000371429 CAMTA2O94983 1202 aa16.09■□□□□ 0.17
NDC1-201ENST00000371429 MYL1P05976 194 aa16.09■□□□□ 0.17
NDC1-201ENST00000371429 ZFP91Q96JP5 570 aaPredicted RBP16.09■□□□□ 0.17
NDC1-201ENST00000371429 SF3B3Q15393 1217 aaKnown RBP16.09■□□□□ 0.17
NDC1-201ENST00000371429 CHAMP1Q96JM3 812 aa16.09■□□□□ 0.17
NDC1-201ENST00000371429 FTOQ9C0B1 505 aaKnown RBP eCLIP16.09■□□□□ 0.17
NDC1-201ENST00000371429 PNPLA6Q8IY17 1366 aa16.09■□□□□ 0.17
NDC1-201ENST00000371429 COBLO75128 1261 aa16.09■□□□□ 0.17
NDC1-201ENST00000371429 PLCG1P19174 1290 aa16.09■□□□□ 0.17
NDC1-201ENST00000371429 TAOK1Q7L7X3 1001 aa16.09■□□□□ 0.17
NDC1-201ENST00000371429 TIGD1Q96MW7 591 aa16.09■□□□□ 0.17
NDC1-201ENST00000371429 EMILIN3Q9NT22 766 aa16.09■□□□□ 0.17
NDC1-201ENST00000371429 VPS18Q9P253 973 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms