RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 SORBS3O60504 671 aa12.74□□□□□ -0.37
EXOSC1-202ENST00000370885 CPT1AP50416 773 aa12.74□□□□□ -0.37
EXOSC1-202ENST00000370885 CCL23P55773 120 aa12.74□□□□□ -0.37
EXOSC1-202ENST00000370885 EXOSC10Q01780 885 aaKnown RBP12.74□□□□□ -0.37
EXOSC1-202ENST00000370885 TTLL4Q14679 1199 aa12.74□□□□□ -0.37
EXOSC1-202ENST00000370885 PGM5Q15124 567 aa12.74□□□□□ -0.37
EXOSC1-202ENST00000370885 ZNF365Q70YC5 407 aa12.74□□□□□ -0.37
EXOSC1-202ENST00000370885 CATIPQ7Z7H3 387 aa12.74□□□□□ -0.37
EXOSC1-202ENST00000370885 VSIG10LQ86VR7 867 aa12.74□□□□□ -0.37
EXOSC1-202ENST00000370885 SCLYQ96I15 445 aa12.74□□□□□ -0.37
EXOSC1-202ENST00000370885 RNPC3Q96LT9 517 aaKnown RBP12.74□□□□□ -0.37
EXOSC1-202ENST00000370885 MTG1Q9BT17 334 aaPredicted RBP12.74□□□□□ -0.37
EXOSC1-202ENST00000370885 HIPK3Q9H422 1215 aa12.74□□□□□ -0.37
EXOSC1-202ENST00000370885 POLR3EQ9NVU0 708 aa12.74□□□□□ -0.37
EXOSC1-202ENST00000370885 CXXC1Q9P0U4 656 aaPredicted RBP12.74□□□□□ -0.37
EXOSC1-202ENST00000370885 TELO2Q9Y4R8 837 aa12.74□□□□□ -0.37
EXOSC1-202ENST00000370885 REV3LO60673 3130 aa12.73□□□□□ -0.37
EXOSC1-202ENST00000370885 TLR3O15455 904 aaKnown RBP12.73□□□□□ -0.37
EXOSC1-202ENST00000370885 EIF3JO75822 258 aaKnown RBP12.73□□□□□ -0.37
EXOSC1-202ENST00000370885 DDAH1O94760 285 aa12.73□□□□□ -0.37
EXOSC1-202ENST00000370885 MMP3P08254 477 aa12.73□□□□□ -0.37
EXOSC1-202ENST00000370885 MYCLP12524 364 aaPredicted RBP12.73□□□□□ -0.37
EXOSC1-202ENST00000370885 MCM5P33992 734 aa12.73□□□□□ -0.37
EXOSC1-202ENST00000370885 PBX2P40425 430 aa12.73□□□□□ -0.37
EXOSC1-202ENST00000370885 MRPS9P82933 396 aaKnown RBP12.73□□□□□ -0.37
EXOSC1-202ENST00000370885 SMAD3P84022 425 aaKnown RBP12.73□□□□□ -0.37
EXOSC1-202ENST00000370885 SART3Q15020 963 aaKnown RBP12.73□□□□□ -0.37
EXOSC1-202ENST00000370885 FCHSD1Q86WN1 690 aa12.73□□□□□ -0.37
EXOSC1-202ENST00000370885 MAP3K14Q99558 947 aa12.73□□□□□ -0.37
EXOSC1-202ENST00000370885 MTA3Q9BTC8 594 aa12.73□□□□□ -0.37
EXOSC1-202ENST00000370885 SPZ1Q9BXG8 430 aa12.73□□□□□ -0.37
EXOSC1-202ENST00000370885 BACH2Q9BYV9 841 aa12.73□□□□□ -0.37
EXOSC1-202ENST00000370885 SEMA6BQ9H3T3 888 aa12.73□□□□□ -0.37
EXOSC1-202ENST00000370885 BRPF3Q9ULD4 1205 aa12.73□□□□□ -0.37
EXOSC1-202ENST00000370885 DOCK5Q9H7D0 1870 aa12.73□□□□□ -0.37
EXOSC1-202ENST00000370885 FRMPD4Q14CM0 1322 aa12.72□□□□□ -0.37
EXOSC1-202ENST00000370885 GCOM1H8Y6P7 765 aaPredicted RBP12.72□□□□□ -0.37
EXOSC1-202ENST00000370885 MEIS2O14770 477 aa12.72□□□□□ -0.37
EXOSC1-202ENST00000370885 GH1P01241 217 aa12.72□□□□□ -0.37
EXOSC1-202ENST00000370885 POLR2MP0CAP2 368 aa12.72□□□□□ -0.37
EXOSC1-202ENST00000370885 CPA1P15085 419 aa12.72□□□□□ -0.37
EXOSC1-202ENST00000370885 LIFRP42702 1097 aa12.72□□□□□ -0.37
EXOSC1-202ENST00000370885 SEMA3FQ13275 785 aa12.72□□□□□ -0.37
EXOSC1-202ENST00000370885 PPIGQ13427 754 aaKnown RBP eCLIP12.72□□□□□ -0.379e-6■■□□□ 12.8
EXOSC1-202ENST00000370885 HIC1Q14526 733 aa12.72□□□□□ -0.37
EXOSC1-202ENST00000370885 USP17L6PQ6QN14 398 aa12.72□□□□□ -0.37
EXOSC1-202ENST00000370885 CASC1Q6TDU7 716 aa12.72□□□□□ -0.37
EXOSC1-202ENST00000370885 TET1Q8NFU7 2136 aa12.72□□□□□ -0.37
EXOSC1-202ENST00000370885 TMEM87BQ96K49 555 aa12.72□□□□□ -0.37
EXOSC1-202ENST00000370885 IL23AQ9NPF7 189 aa12.72□□□□□ -0.37
EXOSC1-202ENST00000370885 STXBP5LQ9Y2K9 1186 aa12.72□□□□□ -0.37
EXOSC1-202ENST00000370885 TRIP12Q14669 1992 aaPredicted RBP12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 B4DLN1 442 aa12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 MRPL12P52815 198 aaKnown RBP12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 FUT2Q10981 343 aa12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 GPNMBQ14956 572 aa12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 HSDL1Q3SXM5 330 aa12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 TSGA10IPQ3SY00 556 aa12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 MYSM1Q5VVJ2 828 aa12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 GDF6Q6KF10 455 aaPredicted RBP12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 NFXL1Q6ZNB6 911 aa12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 SGMS1Q86VZ5 419 aa12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 CCDC82Q8N4S0 544 aa12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 TMEM199Q8N511 208 aa12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 DHX38Q92620 1227 aaKnown RBP12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 EMID1Q96A84 441 aaPredicted RBP12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 MPHOSPH6Q99547 160 aaKnown RBP12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 CDX2Q99626 313 aaPredicted RBP12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 FAM217BQ9NTX9 383 aaPredicted RBP12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 MAP3K20Q9NYL2 800 aaKnown RBP12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 MRVI1Q9Y6F6 885 aa12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 GBF1Q92538 1859 aa12.71□□□□□ -0.37
EXOSC1-202ENST00000370885 CCDC69A6NI79 296 aa12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 CDC45O75419 566 aa12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 ZNF286BP0CG31 522 aa12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 HOXD8P13378 290 aaPredicted RBP12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 UBA1P22314 1058 aaKnown RBP12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 SMARCA1P28370 1054 aa12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 CHMP4BP1P59074 171 aa12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 FAM47CQ5HY64 1035 aa12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 TYW1BQ6NUM6 668 aa12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 NFRKBQ6P4R8 1299 aa12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 TMTC3Q6ZXV5 915 aa12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 OTOP2Q7RTS6 562 aa12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 SAMD3Q8N6K7 520 aa12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 FANCBQ8NB91 859 aa12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 CTCFLQ8NI51 663 aaPredicted RBP12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 HERVK_113Q902F9 699 aa12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 KCNB2Q92953 911 aa12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 WNT8BQ93098 351 aa12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 NEK1Q96PY6 1258 aa12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 RTEL1Q9NZ71 1219 aa12.7□□□□□ -0.38
EXOSC1-202ENST00000370885 VCANP13611 3396 aa12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 HAS3O00219 553 aa12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 KPNA6O60684 536 aa12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 GGPS1O95749 300 aa12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 DNAJB2P25686 324 aa12.69□□□□□ -0.38
EXOSC1-202ENST00000370885 ZNF200P98182 395 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms