RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 EPHX3Q9H6B9 360 aa17.21■□□□□ 0.35
LMO4-201ENST00000370542 R3HCC1Q9Y3T6 440 aaKnown RBP17.21■□□□□ 0.35
LMO4-201ENST00000370542 UQCRHLA0A096LP55 91 aa17.2■□□□□ 0.34
LMO4-201ENST00000370542 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.2■□□□□ 0.34
LMO4-201ENST00000370542 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.2■□□□□ 0.34
LMO4-201ENST00000370542 PTPDC1A2A3K4 754 aa17.2■□□□□ 0.34
LMO4-201ENST00000370542 UQCRHP07919 91 aa17.2■□□□□ 0.34
LMO4-201ENST00000370542 GSPT1P15170 499 aaKnown RBP17.2■□□□□ 0.34
LMO4-201ENST00000370542 ASPRV1Q53RT3 343 aa17.2■□□□□ 0.34
LMO4-201ENST00000370542 MCTP1Q6DN14 999 aa17.2■□□□□ 0.34
LMO4-201ENST00000370542 PRIMPOLQ96LW4 560 aa17.2■□□□□ 0.34
LMO4-201ENST00000370542 GAS2L1Q99501 681 aaPredicted RBP17.2■□□□□ 0.34
LMO4-201ENST00000370542 KRT23Q9C075 422 aa17.2■□□□□ 0.34
LMO4-201ENST00000370542 UBA5Q9GZZ9 404 aa17.2■□□□□ 0.34
LMO4-201ENST00000370542 CNNM2Q9H8M5 875 aa17.2■□□□□ 0.34
LMO4-201ENST00000370542 SCN10AQ9Y5Y9 1956 aa17.19■□□□□ 0.34
LMO4-201ENST00000370542 NKRFO15226 690 aaKnown RBP eCLIP17.19■□□□□ 0.34
LMO4-201ENST00000370542 GOLGA8HP0CJ92 632 aa17.19■□□□□ 0.34
LMO4-201ENST00000370542 CSF2RAP15509 400 aa17.19■□□□□ 0.34
LMO4-201ENST00000370542 GHRHRQ02643 423 aa17.19■□□□□ 0.34
LMO4-201ENST00000370542 SEC23AQ15436 765 aa17.19■□□□□ 0.34
LMO4-201ENST00000370542 TTC22Q5TAA0 569 aa17.19■□□□□ 0.34
LMO4-201ENST00000370542 UTP14CQ5TAP6 766 aaKnown RBP17.19■□□□□ 0.34
LMO4-201ENST00000370542 ADGRF4Q8IZF3 695 aa17.19■□□□□ 0.34
LMO4-201ENST00000370542 TMEM199Q8N511 208 aa17.19■□□□□ 0.34
LMO4-201ENST00000370542 TIFAQ96CG3 184 aa17.19■□□□□ 0.34
LMO4-201ENST00000370542 CPVLQ9H3G5 476 aa17.19■□□□□ 0.34
LMO4-201ENST00000370542 KAT14Q9H8E8 782 aa17.19■□□□□ 0.34
LMO4-201ENST00000370542 TNKSO95271 1327 aa17.19■□□□□ 0.34
LMO4-201ENST00000370542 RAD50Q92878 1312 aa17.19■□□□□ 0.34
LMO4-201ENST00000370542 A6NJR5 290 aa17.18■□□□□ 0.34
LMO4-201ENST00000370542 CALML3P27482 149 aa17.18■□□□□ 0.34
LMO4-201ENST00000370542 PURAQ00577 322 aaKnown RBP17.18■□□□□ 0.34
LMO4-201ENST00000370542 CDC37Q16543 378 aaPredicted RBP17.18■□□□□ 0.34
LMO4-201ENST00000370542 TMEM31Q5JXX7 168 aa17.18■□□□□ 0.34
LMO4-201ENST00000370542 CAVIN1Q6NZI2 390 aaKnown RBP17.18■□□□□ 0.34
LMO4-201ENST00000370542 SCFD2Q8WU76 684 aa17.18■□□□□ 0.34
LMO4-201ENST00000370542 VWCEQ96DN2 955 aa17.18■□□□□ 0.34
LMO4-201ENST00000370542 MTMR8Q96EF0 704 aa17.18■□□□□ 0.34
LMO4-201ENST00000370542 NOC4LQ9BVI4 516 aaKnown RBP17.18■□□□□ 0.34
LMO4-201ENST00000370542 POLR3EQ9NVU0 708 aa17.18■□□□□ 0.34
LMO4-201ENST00000370542 CXXC1Q9P0U4 656 aaPredicted RBP17.18■□□□□ 0.34
LMO4-201ENST00000370542 ABCB11O95342 1321 aa17.18■□□□□ 0.34
LMO4-201ENST00000370542 B4GALT4O60513 344 aa17.17■□□□□ 0.34
LMO4-201ENST00000370542 LETM1O95202 739 aaPredicted RBP17.17■□□□□ 0.34
LMO4-201ENST00000370542 CYP2C18P33260 490 aa17.17■□□□□ 0.34
LMO4-201ENST00000370542 CPT1AP50416 773 aa17.17■□□□□ 0.34
LMO4-201ENST00000370542 ADGRE1Q14246 886 aa17.17■□□□□ 0.34
LMO4-201ENST00000370542 CCDC62Q6P9F0 684 aa17.17■□□□□ 0.34
LMO4-201ENST00000370542 PSRC1Q6PGN9 363 aaPredicted RBP17.17■□□□□ 0.34
LMO4-201ENST00000370542 HERVK_113Q902F9 699 aa17.17■□□□□ 0.34
LMO4-201ENST00000370542 TBC1D5Q92609 795 aa17.17■□□□□ 0.34
LMO4-201ENST00000370542 MPHOSPH6Q99547 160 aaKnown RBP17.17■□□□□ 0.34
LMO4-201ENST00000370542 RBSNQ9H1K0 784 aa17.17■□□□□ 0.34
LMO4-201ENST00000370542 ALDH8A1Q9H2A2 487 aaPredicted RBP17.17■□□□□ 0.34
LMO4-201ENST00000370542 JMJD4Q9H9V9 463 aa17.17■□□□□ 0.34
LMO4-201ENST00000370542 IL23AQ9NPF7 189 aa17.17■□□□□ 0.34
LMO4-201ENST00000370542 MUC6Q6W4X9 2439 aa17.16■□□□□ 0.34
LMO4-201ENST00000370542 B4DLN1 442 aa17.16■□□□□ 0.34
LMO4-201ENST00000370542 EPB41L2O43491 1005 aaKnown RBP17.16■□□□□ 0.34
LMO4-201ENST00000370542 GPR37L1O60883 481 aa17.16■□□□□ 0.34
LMO4-201ENST00000370542 PARP1P09874 1014 aaKnown RBP17.16■□□□□ 0.34
LMO4-201ENST00000370542 MRPL12P52815 198 aaKnown RBP17.16■□□□□ 0.34
LMO4-201ENST00000370542 PSMC6P62333 389 aa17.16■□□□□ 0.34
LMO4-201ENST00000370542 PDE4DQ08499 809 aa17.16■□□□□ 0.34
LMO4-201ENST00000370542 QRICH1Q2TAL8 776 aa17.16■□□□□ 0.34
LMO4-201ENST00000370542 ZNF365Q70YC5 407 aa17.16■□□□□ 0.34
LMO4-201ENST00000370542 SYTL5Q8TDW5 730 aaPredicted RBP17.16■□□□□ 0.34
LMO4-201ENST00000370542 USP26Q9BXU7 913 aa17.16■□□□□ 0.34
LMO4-201ENST00000370542 PPP1R12CQ9BZL4 782 aa17.16■□□□□ 0.34
LMO4-201ENST00000370542 TRPV6Q9H1D0 765 aa17.16■□□□□ 0.34
LMO4-201ENST00000370542 HIPK3Q9H422 1215 aa17.16■□□□□ 0.34
LMO4-201ENST00000370542 PRDM12Q9H4Q4 367 aa17.16■□□□□ 0.34
LMO4-201ENST00000370542 C11orf16Q9NQ32 467 aa17.16■□□□□ 0.34
LMO4-201ENST00000370542 COL20A1Q9P218 1284 aa17.16■□□□□ 0.34
LMO4-201ENST00000370542 UMODL1Q5DID0 1318 aa17.16■□□□□ 0.34
LMO4-201ENST00000370542 REV3LO60673 3130 aa17.16■□□□□ 0.34
LMO4-201ENST00000370542 CHD7Q9P2D1 2997 aa17.16■□□□□ 0.34
LMO4-201ENST00000370542 PALM3A6NDB9 673 aaPredicted RBP17.15■□□□□ 0.34
LMO4-201ENST00000370542 KPNA6O60684 536 aa17.15■□□□□ 0.34
LMO4-201ENST00000370542 TPM3P06753 285 aa17.15■□□□□ 0.34
LMO4-201ENST00000370542 CHMLP26374 656 aa17.15■□□□□ 0.34
LMO4-201ENST00000370542 PPP2R5BQ15173 497 aa17.15■□□□□ 0.34
LMO4-201ENST00000370542 CCDC85BQ15834 202 aaPredicted RBP17.15■□□□□ 0.34
LMO4-201ENST00000370542 USH1GQ495M9 461 aa17.15■□□□□ 0.34
LMO4-201ENST00000370542 MCF2L2Q86YR7 1114 aa17.15■□□□□ 0.34
LMO4-201ENST00000370542 OR6J1Q8NGC5 347 aa17.15■□□□□ 0.34
LMO4-201ENST00000370542 IWS1Q96ST2 819 aa17.15■□□□□ 0.34
LMO4-201ENST00000370542 WNT8AQ9H1J5 351 aa17.15■□□□□ 0.34
LMO4-201ENST00000370542 OPLAHO14841 1288 aa17.14■□□□□ 0.33
LMO4-201ENST00000370542 ARIH2O95376 493 aa17.14■□□□□ 0.33
LMO4-201ENST00000370542 CD2BP2O95400 341 aaKnown RBP17.14■□□□□ 0.33
LMO4-201ENST00000370542 CYP21A2P08686 494 aa17.14■□□□□ 0.33
LMO4-201ENST00000370542 ACRP10323 421 aa17.14■□□□□ 0.33
LMO4-201ENST00000370542 IFIT1BQ5T764 474 aaKnown RBP17.14■□□□□ 0.33
LMO4-201ENST00000370542 NFRKBQ6P4R8 1299 aa17.14■□□□□ 0.33
LMO4-201ENST00000370542 CYB5R4Q7L1T6 521 aa17.14■□□□□ 0.33
LMO4-201ENST00000370542 FBXO11Q86XK2 927 aa17.14■□□□□ 0.33
LMO4-201ENST00000370542 STAG2Q8N3U4 1231 aa17.14■□□□□ 0.33
LMO4-201ENST00000370542 NSUN6Q8TEA1 469 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms