RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 SEPT4O43236 478 aa17.72■□□□□ 0.43
PRPF38B-202ENST00000370022 AKR1A1P14550 325 aa17.72■□□□□ 0.43
PRPF38B-202ENST00000370022 USP11P51784 963 aa17.72■□□□□ 0.43
PRPF38B-202ENST00000370022 ARHGAP4P98171 946 aa17.72■□□□□ 0.43
PRPF38B-202ENST00000370022 PRAMEF19Q5SWL8 479 aa17.72■□□□□ 0.43
PRPF38B-202ENST00000370022 KCNV1Q6PIU1 500 aa17.72■□□□□ 0.43
PRPF38B-202ENST00000370022 FBXO16Q8IX29 292 aaPredicted RBP17.72■□□□□ 0.43
PRPF38B-202ENST00000370022 OXER1Q8TDS5 423 aa17.72■□□□□ 0.43
PRPF38B-202ENST00000370022 FOXD4L1Q9NU39 408 aa17.72■□□□□ 0.43
PRPF38B-202ENST00000370022 FAM184BQ9ULE4 1060 aa17.72■□□□□ 0.43
PRPF38B-202ENST00000370022 RBM47A0AV96 593 aaKnown RBP17.71■□□□□ 0.43
PRPF38B-202ENST00000370022 MRPS9P82933 396 aaKnown RBP17.71■□□□□ 0.43
PRPF38B-202ENST00000370022 NR5A1Q13285 461 aa17.71■□□□□ 0.43
PRPF38B-202ENST00000370022 GNL2Q13823 731 aaKnown RBP17.71■□□□□ 0.43
PRPF38B-202ENST00000370022 IQSEC1Q6DN90 963 aa17.71■□□□□ 0.43
PRPF38B-202ENST00000370022 TAPT1Q6NXT6 567 aa17.71■□□□□ 0.43
PRPF38B-202ENST00000370022 EEPD1Q7L9B9 569 aa17.71■□□□□ 0.43
PRPF38B-202ENST00000370022 NLRX1Q86UT6 975 aa17.71■□□□□ 0.43
PRPF38B-202ENST00000370022 TRPV1Q8NER1 839 aa17.71■□□□□ 0.43
PRPF38B-202ENST00000370022 TBCKQ8TEA7 893 aa17.71■□□□□ 0.43
PRPF38B-202ENST00000370022 SCFD2Q8WU76 684 aa17.71■□□□□ 0.43
PRPF38B-202ENST00000370022 TNFRSF25Q93038 417 aa17.71■□□□□ 0.43
PRPF38B-202ENST00000370022 INPP4AQ96PE3 977 aaPredicted RBP17.71■□□□□ 0.43
PRPF38B-202ENST00000370022 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.71■□□□□ 0.432e-6■□□□□ 9.9
PRPF38B-202ENST00000370022 DDX49Q9Y6V7 483 aaKnown RBP17.71■□□□□ 0.43
PRPF38B-202ENST00000370022 LRRC37A2A6NM11 1700 aa17.71■□□□□ 0.43
PRPF38B-202ENST00000370022 MAFGO15525 162 aa17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 TGFB3P10600 412 aa17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 CCL5P13501 91 aa17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 CNGA1P29973 690 aa17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 CCND3P30281 292 aaPredicted RBP17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 CCDC144BQ3MJ40 725 aa17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 PIK3AP1Q6ZUJ8 805 aa17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 CDHR1Q96JP9 859 aa17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 PAK6Q9NQU5 681 aaPredicted RBP17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 UBIAD1Q9Y5Z9 338 aa17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 CAPN2P17655 700 aa17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 U2AF2P26368 475 aaKnown RBP eCLIP17.7■□□□□ 0.423e-9■■■□□ 18.3
PRPF38B-202ENST00000370022 CIITAP33076 1130 aa17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 ZNF76P36508 570 aa17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 TTLL4Q14679 1199 aa17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 CEP55Q53EZ4 464 aa17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 GPRASP2Q96D09 838 aa17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 NAP1L4Q99733 375 aaKnown RBP17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 RNF208Q9H0X6 261 aa17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 UNC93B1Q9H1C4 597 aa17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 JADE2Q9NQC1 790 aa17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 DDX20Q9UHI6 824 aaKnown RBP17.7■□□□□ 0.42
PRPF38B-202ENST00000370022 NKRFO15226 690 aaKnown RBP eCLIP17.69■□□□□ 0.42
PRPF38B-202ENST00000370022 FIBPO43427 364 aa17.69■□□□□ 0.42
PRPF38B-202ENST00000370022 RGS20O76081 388 aa17.69■□□□□ 0.42
PRPF38B-202ENST00000370022 SYT1P21579 422 aa17.69■□□□□ 0.42
PRPF38B-202ENST00000370022 ICAM3P32942 547 aa17.69■□□□□ 0.42
PRPF38B-202ENST00000370022 TNFAIP2Q03169 654 aa17.69■□□□□ 0.42
PRPF38B-202ENST00000370022 MTFR1Q15390 333 aa17.69■□□□□ 0.42
PRPF38B-202ENST00000370022 MOXD1Q6UVY6 613 aa17.69■□□□□ 0.42
PRPF38B-202ENST00000370022 SEPT14Q6ZU15 432 aa17.69■□□□□ 0.42
PRPF38B-202ENST00000370022 NIPA1Q7RTP0 329 aa17.69■□□□□ 0.42
PRPF38B-202ENST00000370022 NEK8Q86SG6 692 aa17.69■□□□□ 0.42
PRPF38B-202ENST00000370022 NOSTRINQ8IVI9 506 aa17.69■□□□□ 0.42
PRPF38B-202ENST00000370022 MXRA8Q9BRK3 442 aa17.69■□□□□ 0.42
PRPF38B-202ENST00000370022 WDR11Q9BZH6 1224 aa17.69■□□□□ 0.42
PRPF38B-202ENST00000370022 RTEL1Q9NZ71 1219 aa17.69■□□□□ 0.42
PRPF38B-202ENST00000370022 RARBP10826 455 aa17.68■□□□□ 0.42
PRPF38B-202ENST00000370022 ITGB5P18084 799 aa17.68■□□□□ 0.42
PRPF38B-202ENST00000370022 ADCYAP1R1P41586 468 aa17.68■□□□□ 0.42
PRPF38B-202ENST00000370022 SETQ01105 290 aaPredicted RBP17.68■□□□□ 0.42
PRPF38B-202ENST00000370022 MTMR1Q13613 665 aa17.68■□□□□ 0.42
PRPF38B-202ENST00000370022 INF2Q27J81 1249 aa17.68■□□□□ 0.42
PRPF38B-202ENST00000370022 ABHD8Q96I13 439 aa17.68■□□□□ 0.42
PRPF38B-202ENST00000370022 PDGFCQ9NRA1 345 aa17.68■□□□□ 0.42
PRPF38B-202ENST00000370022 Q9Y3F1 56 aa17.68■□□□□ 0.42
PRPF38B-202ENST00000370022 MRVI1Q9Y6F6 885 aa17.68■□□□□ 0.42
PRPF38B-202ENST00000370022 HTTP42858 3142 aa17.68■□□□□ 0.42
PRPF38B-202ENST00000370022 MCM3APO60318 1980 aa17.67■□□□□ 0.42
PRPF38B-202ENST00000370022 SPATA31C2B4DYI2 1134 aa17.67■□□□□ 0.42
PRPF38B-202ENST00000370022 MEIS1O00470 390 aa17.67■□□□□ 0.42
PRPF38B-202ENST00000370022 STX6O43752 255 aa17.67■□□□□ 0.42
PRPF38B-202ENST00000370022 DUSP11O75319 330 aaKnown RBP17.67■□□□□ 0.42
PRPF38B-202ENST00000370022 GJB1P08034 283 aa17.67■□□□□ 0.42
PRPF38B-202ENST00000370022 TXNP10599 105 aaKnown RBP17.67■□□□□ 0.42
PRPF38B-202ENST00000370022 GCFC2P16383 781 aaKnown RBP17.67■□□□□ 0.42
PRPF38B-202ENST00000370022 DUSP28Q4G0W2 176 aa17.67■□□□□ 0.42
PRPF38B-202ENST00000370022 EARS2Q5JPH6 523 aaKnown RBP17.67■□□□□ 0.42
PRPF38B-202ENST00000370022 MCTP1Q6DN14 999 aa17.67■□□□□ 0.42
PRPF38B-202ENST00000370022 PPP4R3AQ6IN85 833 aa17.67■□□□□ 0.42
PRPF38B-202ENST00000370022 CCDC62Q6P9F0 684 aa17.67■□□□□ 0.42
PRPF38B-202ENST00000370022 TMEM106CQ9BVX2 250 aa17.67■□□□□ 0.42
PRPF38B-202ENST00000370022 CYP3A7-CYP3A51PA0A087WV96 503 aa17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 VPS37CA5D8V6 355 aaPredicted RBP17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 FAM86B1E9PN63 330 aa17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 FAM86B2P0C5J1 330 aa17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 CYP3A7P24462 503 aa17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 TRAPPC10P48553 1259 aa17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 SPRYD3Q8NCJ5 442 aa17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 ZFP91Q96JP5 570 aaPredicted RBP17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 DDX41Q9UJV9 622 aaKnown RBP17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 GNEQ9Y223 722 aaKnown RBP17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 IGLV3-22A0A075B6J6 115 aa17.66■□□□□ 0.42
PRPF38B-202ENST00000370022 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms