RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 PRPF6O94906 941 aaKnown RBP12.07□□□□□ -0.48
LRIF1-201ENST00000369763 TAL1P17542 331 aaPredicted RBP12.07□□□□□ -0.48
LRIF1-201ENST00000369763 GNA11P29992 359 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 SNAP25P60880 206 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 GUCY2DQ02846 1103 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 SBK1Q52WX2 424 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 C8orf74Q6P047 294 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 SAMD1Q6SPF0 538 aaPredicted RBP12.07□□□□□ -0.48
LRIF1-201ENST00000369763 MICALL1Q8N3F8 863 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 TRIM58Q8NG06 486 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 BCAS4Q8TDM0 211 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 PACSIN1Q9BY11 444 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 JRKLQ9Y4A0 524 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 PCNTO95613 3336 aa12.07□□□□□ -0.48
LRIF1-201ENST00000369763 GNGT1P63211 74 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 PDCLQ13371 301 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 KCTD1Q719H9 257 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 KRT25Q7Z3Z0 450 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 CCDC170Q8IYT3 715 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 ALS2CR12Q96Q35 445 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 ZMYND12Q9H0C1 365 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 MYH14Q7Z406 1995 aaKnown RBP12.06□□□□□ -0.48
LRIF1-201ENST00000369763 CACNA1SQ13698 1873 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 FAM196BA6NMK8 535 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 E9PMD0 336 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 UFL1O94874 794 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 FAM153BP0C7A2 387 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 PAFAH1B1P43034 410 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 CARSP49589 748 aaKnown RBP12.06□□□□□ -0.48
LRIF1-201ENST00000369763 FAM153CQ494X1 144 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 FAM133AQ8N9E0 248 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 TBC1D5Q92609 795 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 PNMA5Q96PV4 448 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 LSM14BQ9BX40 385 aaKnown RBP12.06□□□□□ -0.48
LRIF1-201ENST00000369763 SH3GLB2Q9NR46 395 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 FAM153AQ9UHL3 310 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 PLAGL2Q9UPG8 496 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 KRT18P05783 430 aaKnown RBP12.06□□□□□ -0.48
LRIF1-201ENST00000369763 STAT3P40763 770 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 EPS15P42566 896 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 KRT79Q5XKE5 535 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 SPTY2D1Q68D10 685 aaPredicted RBP12.06□□□□□ -0.48
LRIF1-201ENST00000369763 KRT12Q99456 494 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 MXD3Q9BW11 206 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 ANKRD2Q9GZV1 360 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 EPB41L5Q9HCM4 733 aa12.06□□□□□ -0.48
LRIF1-201ENST00000369763 MEIS1O00470 390 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 GLI1P08151 1106 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 MFSD14BQ5SR56 506 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 CLEC4GQ6UXB4 293 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 SLC30A10Q6XR72 485 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 PACS2Q86VP3 889 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 C7orf25Q9BPX7 421 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 MKRN1Q9UHC7 482 aaKnown RBP12.05□□□□□ -0.48
LRIF1-201ENST00000369763 FAM184BQ9ULE4 1060 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 DISP2A7MBM2 1401 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 SPATA31A1Q5TZJ5 1347 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 ZC3H4Q9UPT8 1303 aaKnown RBP12.05□□□□□ -0.48
LRIF1-201ENST00000369763 PALMO75781 387 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 ACTN1P12814 892 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 SIK3Q9Y2K2 1263 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 USP17L15C9J2P7 530 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 USP17L13C9JLJ4 530 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 USP17L11C9JVI0 530 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 USP17L18D6R9N7 530 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 USP17L22D6RA61 530 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 USP17L17D6RBQ6 530 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 USP17L19D6RCP7 530 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 USP17L20D6RJB6 530 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 C6orf229H3BNL8 230 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 IBSPP21815 317 aaPredicted RBP12.05□□□□□ -0.48
LRIF1-201ENST00000369763 USP17L24Q0WX57 530 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 TMEM266Q2M3C6 531 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 HERC4Q5GLZ8 1057 aaPredicted RBP12.05□□□□□ -0.48
LRIF1-201ENST00000369763 USP17L6PQ6QN14 398 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 DPP8Q6V1X1 898 aaPredicted RBP12.05□□□□□ -0.48
LRIF1-201ENST00000369763 NOC3LQ8WTT2 800 aaKnown RBP12.05□□□□□ -0.48
LRIF1-201ENST00000369763 CCDC43Q96MW1 224 aaKnown RBP12.05□□□□□ -0.48
LRIF1-201ENST00000369763 ERGIC2Q96RQ1 377 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 BCAS3Q9H6U6 928 aa12.05□□□□□ -0.48
LRIF1-201ENST00000369763 MCM3P25205 808 aa12.04□□□□□ -0.48
LRIF1-201ENST00000369763 HPDP32754 393 aaPredicted RBP12.04□□□□□ -0.48
LRIF1-201ENST00000369763 NOP2P46087 812 aaKnown RBP12.04□□□□□ -0.48
LRIF1-201ENST00000369763 TUBB4BP68371 445 aa12.04□□□□□ -0.48
LRIF1-201ENST00000369763 HLTFQ14527 1009 aaKnown RBP eCLIP12.04□□□□□ -0.483e-6■■□□□ 11.6
LRIF1-201ENST00000369763 MAN2A1Q16706 1144 aa12.04□□□□□ -0.48
LRIF1-201ENST00000369763 IQCEQ6IPM2 695 aa12.04□□□□□ -0.48
LRIF1-201ENST00000369763 TLR10Q9BXR5 811 aa12.04□□□□□ -0.48
LRIF1-201ENST00000369763 KIAA1024Q9UPX6 916 aa12.04□□□□□ -0.48
LRIF1-201ENST00000369763 BACH1O14867 736 aa12.04□□□□□ -0.48
LRIF1-201ENST00000369763 KLRC1P26715 233 aa12.04□□□□□ -0.48
LRIF1-201ENST00000369763 SCNN1DP51172 638 aa12.04□□□□□ -0.48
LRIF1-201ENST00000369763 IRAK1P51617 712 aa12.04□□□□□ -0.48
LRIF1-201ENST00000369763 KIAA0753Q2KHM9 967 aa12.04□□□□□ -0.48
LRIF1-201ENST00000369763 SHROOM1Q2M3G4 852 aaPredicted RBP12.04□□□□□ -0.48
LRIF1-201ENST00000369763 TCERG1LQ5VWI1 586 aa12.04□□□□□ -0.48
LRIF1-201ENST00000369763 HAUS3Q68CZ6 603 aa12.04□□□□□ -0.48
LRIF1-201ENST00000369763 WDR66Q8TBY9 1149 aa12.04□□□□□ -0.48
LRIF1-201ENST00000369763 ARHGEF1Q92888 912 aaKnown RBP12.04□□□□□ -0.48
LRIF1-201ENST00000369763 CAPS2Q9BXY5 557 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms