RNA–Protein interactions for RNA: ENST00000369738.8

PIFO-202, Transcript of primary cilia formation, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PIFO, Length 2,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIFO-202ENST00000369738 CUEDC2Q9H467 287 aa13.19□□□□□ -0.3
PIFO-202ENST00000369738 FAM153AQ9UHL3 310 aa13.19□□□□□ -0.3
PIFO-202ENST00000369738 PACSIN2Q9UNF0 486 aaPredicted RBP13.19□□□□□ -0.3
PIFO-202ENST00000369738 GRIN2DO15399 1336 aa13.19□□□□□ -0.3
PIFO-202ENST00000369738 TLR2O60603 784 aa13.19□□□□□ -0.3
PIFO-202ENST00000369738 USO1O60763 962 aaKnown RBP13.19□□□□□ -0.3
PIFO-202ENST00000369738 LDHBP07195 334 aaKnown RBP13.19□□□□□ -0.3
PIFO-202ENST00000369738 GLI1P08151 1106 aa13.19□□□□□ -0.3
PIFO-202ENST00000369738 RNASE9P60153 205 aaKnown RBP13.19□□□□□ -0.3
PIFO-202ENST00000369738 PPARDQ03181 441 aa13.19□□□□□ -0.3
PIFO-202ENST00000369738 NFIXQ14938 502 aa13.19□□□□□ -0.3
PIFO-202ENST00000369738 SLC10A5Q5PT55 438 aa13.19□□□□□ -0.3
PIFO-202ENST00000369738 CNNM4Q6P4Q7 775 aa13.19□□□□□ -0.3
PIFO-202ENST00000369738 DNAAF5Q86Y56 855 aa13.19□□□□□ -0.3
PIFO-202ENST00000369738 CLEC10AQ8IUN9 316 aa13.19□□□□□ -0.3
PIFO-202ENST00000369738 NLRP3Q96P20 1036 aa13.19□□□□□ -0.3
PIFO-202ENST00000369738 COL16A1Q07092 1604 aaPredicted RBP13.19□□□□□ -0.3
PIFO-202ENST00000369738 FRMPD2Q68DX3 1309 aaPredicted RBP13.18□□□□□ -0.3
PIFO-202ENST00000369738 USP17L5A8MUK1 530 aa13.18□□□□□ -0.3
PIFO-202ENST00000369738 LCA5LO95447 670 aa13.18□□□□□ -0.3
PIFO-202ENST00000369738 KCTD16Q68DU8 428 aa13.18□□□□□ -0.3
PIFO-202ENST00000369738 GALNT17Q6IS24 598 aa13.18□□□□□ -0.3
PIFO-202ENST00000369738 SV2BQ7L1I2 683 aa13.18□□□□□ -0.3
PIFO-202ENST00000369738 KRT25Q7Z3Z0 450 aa13.18□□□□□ -0.3
PIFO-202ENST00000369738 CEP95Q96GE4 821 aa13.18□□□□□ -0.3
PIFO-202ENST00000369738 MTMR9Q96QG7 549 aa13.18□□□□□ -0.3
PIFO-202ENST00000369738 TSGA10Q9BZW7 698 aa13.18□□□□□ -0.3
PIFO-202ENST00000369738 TBC1D7Q9P0N9 293 aa13.18□□□□□ -0.3
PIFO-202ENST00000369738 COL14A1Q05707 1796 aaKnown RBP13.18□□□□□ -0.3
PIFO-202ENST00000369738 SNED1Q8TER0 1413 aa13.18□□□□□ -0.3
PIFO-202ENST00000369738 SPATA31A1Q5TZJ5 1347 aa13.18□□□□□ -0.3
PIFO-202ENST00000369738 KRT14P02533 472 aa13.18□□□□□ -0.3
PIFO-202ENST00000369738 CDK8P49336 464 aa13.18□□□□□ -0.3
PIFO-202ENST00000369738 CARSP49589 748 aaKnown RBP13.18□□□□□ -0.3
PIFO-202ENST00000369738 ENOX2Q16206 610 aaKnown RBP13.18□□□□□ -0.3
PIFO-202ENST00000369738 MAN2A1Q16706 1144 aa13.18□□□□□ -0.3
PIFO-202ENST00000369738 ZNF572Q7Z3I7 529 aaPredicted RBP13.18□□□□□ -0.3
PIFO-202ENST00000369738 LARP4BQ92615 738 aaKnown RBP13.18□□□□□ -0.3
PIFO-202ENST00000369738 CCDC47Q96A33 483 aaKnown RBP13.18□□□□□ -0.3
PIFO-202ENST00000369738 EYA3Q99504 573 aa13.18□□□□□ -0.3
PIFO-202ENST00000369738 STRCQ7RTU9 1775 aa13.17□□□□□ -0.3
PIFO-202ENST00000369738 NOL4O94818 638 aa13.17□□□□□ -0.3
PIFO-202ENST00000369738 NBPF5PQ86XG9 351 aaPredicted RBP13.17□□□□□ -0.3
PIFO-202ENST00000369738 AMOTL1Q8IY63 956 aa13.17□□□□□ -0.3
PIFO-202ENST00000369738 DDX12PQ92771 950 aa13.17□□□□□ -0.3
PIFO-202ENST00000369738 CALML4Q96GE6 196 aa13.17□□□□□ -0.3
PIFO-202ENST00000369738 SH3GL2Q99962 352 aa13.17□□□□□ -0.3
PIFO-202ENST00000369738 SPZ1Q9BXG8 430 aa13.17□□□□□ -0.3
PIFO-202ENST00000369738 TANGO6Q9C0B7 1094 aa13.17□□□□□ -0.3
PIFO-202ENST00000369738 MAGEF1Q9HAY2 307 aa13.17□□□□□ -0.3
PIFO-202ENST00000369738 STIM2Q9P246 746 aa13.17□□□□□ -0.3
PIFO-202ENST00000369738 HYOU1Q9Y4L1 999 aa13.17□□□□□ -0.3
PIFO-202ENST00000369738 ROBO1Q9Y6N7 1651 aa13.17□□□□□ -0.3
PIFO-202ENST00000369738 ROBO3Q96MS0 1386 aa13.17□□□□□ -0.3
PIFO-202ENST00000369738 FTCDO95954 541 aa13.17□□□□□ -0.3
PIFO-202ENST00000369738 PDXDC1Q6P996 788 aa13.17□□□□□ -0.3
PIFO-202ENST00000369738 UNC13DQ70J99 1090 aa13.17□□□□□ -0.3
PIFO-202ENST00000369738 PACSIN1Q9BY11 444 aa13.17□□□□□ -0.3
PIFO-202ENST00000369738 C6orf50Q9HD87 102 aa13.17□□□□□ -0.3
PIFO-202ENST00000369738 SAMM50Q9Y512 469 aa13.17□□□□□ -0.3
PIFO-202ENST00000369738 NAP1L1P55209 391 aaKnown RBP13.16□□□□□ -0.3
PIFO-202ENST00000369738 EIF6P56537 245 aaKnown RBP13.16□□□□□ -0.3
PIFO-202ENST00000369738 GNGT1P63211 74 aa13.16□□□□□ -0.3
PIFO-202ENST00000369738 AMPD3Q01432 767 aa13.16□□□□□ -0.3
PIFO-202ENST00000369738 CACNB1Q02641 598 aaPredicted RBP13.16□□□□□ -0.3
PIFO-202ENST00000369738 ARID5AQ03989 594 aa13.16□□□□□ -0.3
PIFO-202ENST00000369738 CALCRLQ16602 461 aa13.16□□□□□ -0.3
PIFO-202ENST00000369738 PTPROQ16827 1216 aa13.16□□□□□ -0.3
PIFO-202ENST00000369738 TDRD12Q587J7 1177 aaKnown RBP13.16□□□□□ -0.3
PIFO-202ENST00000369738 CCDC181Q5TID7 509 aa13.16□□□□□ -0.3
PIFO-202ENST00000369738 REXO1Q8N1G1 1221 aaKnown RBP13.16□□□□□ -0.3
PIFO-202ENST00000369738 PROCA1Q8NCQ7 364 aaPredicted RBP13.16□□□□□ -0.3
PIFO-202ENST00000369738 ZIM3Q96PE6 472 aa13.16□□□□□ -0.3
PIFO-202ENST00000369738 CAPS2Q9BXY5 557 aa13.16□□□□□ -0.3
PIFO-202ENST00000369738 ANKIB1Q9P2G1 1089 aa13.16□□□□□ -0.3
PIFO-202ENST00000369738 NFU1Q9UMS0 254 aa13.16□□□□□ -0.3
PIFO-202ENST00000369738 WNK3Q9BYP7 1800 aa13.16□□□□□ -0.3
PIFO-202ENST00000369738 PRLRP16471 622 aa13.16□□□□□ -0.3
PIFO-202ENST00000369738 ATP1A2P50993 1020 aa13.16□□□□□ -0.3
PIFO-202ENST00000369738 CERS3Q8IU89 383 aa13.16□□□□□ -0.3
PIFO-202ENST00000369738 BCAS4Q8TDM0 211 aa13.16□□□□□ -0.3
PIFO-202ENST00000369738 ANKRD2Q9GZV1 360 aa13.16□□□□□ -0.3
PIFO-202ENST00000369738 DDX60LQ5H9U9 1706 aaKnown RBP13.15□□□□□ -0.3
PIFO-202ENST00000369738 KLRC1P26715 233 aa13.15□□□□□ -0.3
PIFO-202ENST00000369738 PDCLQ13371 301 aa13.15□□□□□ -0.3
PIFO-202ENST00000369738 UBE2SQ16763 222 aa13.15□□□□□ -0.3
PIFO-202ENST00000369738 COBLL1Q53SF7 1204 aa13.15□□□□□ -0.3
PIFO-202ENST00000369738 IQCEQ6IPM2 695 aa13.15□□□□□ -0.3
PIFO-202ENST00000369738 CACNA2D4Q7Z3S7 1137 aa13.15□□□□□ -0.3
PIFO-202ENST00000369738 GUF1Q8N442 669 aaKnown RBP13.15□□□□□ -0.3
PIFO-202ENST00000369738 SETDB2Q96T68 719 aa13.15□□□□□ -0.3
PIFO-202ENST00000369738 RTFDC1Q9BY42 306 aaPredicted RBP13.15□□□□□ -0.3
PIFO-202ENST00000369738 GOLPH3Q9H4A6 298 aa13.15□□□□□ -0.3
PIFO-202ENST00000369738 NPHP3-ACAD11A0A0J9YXS1 232 aa13.15□□□□□ -0.3
PIFO-202ENST00000369738 PJA2O43164 708 aa13.15□□□□□ -0.3
PIFO-202ENST00000369738 PALMO75781 387 aa13.15□□□□□ -0.3
PIFO-202ENST00000369738 TCP1P17987 556 aaKnown RBP13.15□□□□□ -0.3
PIFO-202ENST00000369738 GNA11P29992 359 aa13.15□□□□□ -0.3
PIFO-202ENST00000369738 EHHADHQ08426 723 aa13.15□□□□□ -0.3
PIFO-202ENST00000369738 PPFIA1Q13136 1202 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms