RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 KLF18A0A0U1RQI7 1052 aa23.71■■□□□ 1.39
SMNDC1-201ENST00000369592 ZEB2O60315 1214 aa23.71■■□□□ 1.39
SMNDC1-201ENST00000369592 PQBP1O60828 265 aaKnown RBP23.71■■□□□ 1.39
SMNDC1-201ENST00000369592 CD4P01730 458 aa23.71■■□□□ 1.39
SMNDC1-201ENST00000369592 CDC27P30260 824 aa23.71■■□□□ 1.39
SMNDC1-201ENST00000369592 PURAQ00577 322 aaKnown RBP23.71■■□□□ 1.39
SMNDC1-201ENST00000369592 ARHGAP1Q07960 439 aa23.71■■□□□ 1.39
SMNDC1-201ENST00000369592 BLOC1S2Q6QNY1 142 aa23.71■■□□□ 1.39
SMNDC1-201ENST00000369592 SYNE3Q6ZMZ3 975 aa23.71■■□□□ 1.39
SMNDC1-201ENST00000369592 Q6ZUG5 572 aa23.71■■□□□ 1.39
SMNDC1-201ENST00000369592 Q7L0L9 218 aa23.71■■□□□ 1.39
SMNDC1-201ENST00000369592 OR6J1Q8NGC5 347 aa23.71■■□□□ 1.39
SMNDC1-201ENST00000369592 SEZ6LQ9BYH1 1024 aa23.71■■□□□ 1.39
SMNDC1-201ENST00000369592 SEC63Q9UGP8 760 aaKnown RBP23.71■■□□□ 1.39
SMNDC1-201ENST00000369592 MROH7Q68CQ1 1323 aa23.7■■□□□ 1.38
SMNDC1-201ENST00000369592 hCG_1642624A0A1W2PR95 340 aa23.7■■□□□ 1.38
SMNDC1-201ENST00000369592 CPT1AP50416 773 aa23.7■■□□□ 1.38
SMNDC1-201ENST00000369592 RTN1Q16799 776 aa23.7■■□□□ 1.38
SMNDC1-201ENST00000369592 LY6KQ17RY6 165 aa23.7■■□□□ 1.38
SMNDC1-201ENST00000369592 SEPT14Q6ZU15 432 aa23.7■■□□□ 1.38
SMNDC1-201ENST00000369592 EMID1Q96A84 441 aaPredicted RBP23.7■■□□□ 1.38
SMNDC1-201ENST00000369592 ZSWIM6Q9HCJ5 1215 aa23.7■■□□□ 1.38
SMNDC1-201ENST00000369592 STXBP5LQ9Y2K9 1186 aa23.7■■□□□ 1.38
SMNDC1-201ENST00000369592 DCDC2CA8MYV0 355 aa23.69■■□□□ 1.38
SMNDC1-201ENST00000369592 PSMA5P28066 241 aa23.69■■□□□ 1.38
SMNDC1-201ENST00000369592 MRPS9P82933 396 aaKnown RBP23.69■■□□□ 1.38
SMNDC1-201ENST00000369592 ITGA7Q13683 1181 aa23.69■■□□□ 1.38
SMNDC1-201ENST00000369592 GPR153Q6NV75 609 aa23.69■■□□□ 1.38
SMNDC1-201ENST00000369592 USP17L6PQ6QN14 398 aa23.69■■□□□ 1.38
SMNDC1-201ENST00000369592 FCHSD1Q86WN1 690 aa23.69■■□□□ 1.38
SMNDC1-201ENST00000369592 CCDC82Q8N4S0 544 aa23.69■■□□□ 1.38
SMNDC1-201ENST00000369592 TM6SF1Q9BZW5 370 aa23.69■■□□□ 1.38
SMNDC1-201ENST00000369592 UBE2OQ9C0C9 1292 aaKnown RBP23.69■■□□□ 1.38
SMNDC1-201ENST00000369592 POLR3EQ9NVU0 708 aa23.69■■□□□ 1.38
SMNDC1-201ENST00000369592 PRKAG2Q9UGJ0 569 aa23.69■■□□□ 1.38
SMNDC1-201ENST00000369592 APOBRQ0VD83 1088 aa23.68■■□□□ 1.38
SMNDC1-201ENST00000369592 TYW1BQ6NUM6 668 aa23.68■■□□□ 1.38
SMNDC1-201ENST00000369592 TDHQ8IZJ6 230 aa23.68■■□□□ 1.38
SMNDC1-201ENST00000369592 BADQ92934 168 aa23.68■■□□□ 1.38
SMNDC1-201ENST00000369592 BRF1Q92994 677 aa23.68■■□□□ 1.38
SMNDC1-201ENST00000369592 PRDM5Q9NQX1 630 aaPredicted RBP23.68■■□□□ 1.38
SMNDC1-201ENST00000369592 GOLGA8AA7E2F4 631 aa23.67■■□□□ 1.38
SMNDC1-201ENST00000369592 GOLGA8BA8MQT2 603 aa23.67■■□□□ 1.38
SMNDC1-201ENST00000369592 KPNA6O60684 536 aa23.67■■□□□ 1.38
SMNDC1-201ENST00000369592 GH1P01241 217 aa23.67■■□□□ 1.38
SMNDC1-201ENST00000369592 CASTP20810 708 aaKnown RBP23.67■■□□□ 1.38
SMNDC1-201ENST00000369592 PSMC6P62333 389 aa23.67■■□□□ 1.38
SMNDC1-201ENST00000369592 LRIT3Q3SXY7 679 aa23.67■■□□□ 1.38
SMNDC1-201ENST00000369592 VTI1AQ96AJ9 217 aa23.67■■□□□ 1.38
SMNDC1-201ENST00000369592 INPP4AQ96PE3 977 aaPredicted RBP23.67■■□□□ 1.38
SMNDC1-201ENST00000369592 LBHD1Q9BQE6 289 aaPredicted RBP23.67■■□□□ 1.38
SMNDC1-201ENST00000369592 COL25A1Q9BXS0 654 aaPredicted RBP23.67■■□□□ 1.38
SMNDC1-201ENST00000369592 TMEM39AQ9NV64 488 aa23.67■■□□□ 1.38
SMNDC1-201ENST00000369592 TGFB3P10600 412 aa23.66■■□□□ 1.38
SMNDC1-201ENST00000369592 MYCLP12524 364 aaPredicted RBP23.66■■□□□ 1.38
SMNDC1-201ENST00000369592 HOXD8P13378 290 aaPredicted RBP23.66■■□□□ 1.38
SMNDC1-201ENST00000369592 CCND2P30279 289 aa23.66■■□□□ 1.38
SMNDC1-201ENST00000369592 ADD1P35611 737 aaKnown RBP23.66■■□□□ 1.38
SMNDC1-201ENST00000369592 SP2Q02086 613 aa23.66■■□□□ 1.38
SMNDC1-201ENST00000369592 WWC2Q6AWC2 1192 aa23.66■■□□□ 1.38
SMNDC1-201ENST00000369592 RUFY3Q7L099 469 aa23.66■■□□□ 1.38
SMNDC1-201ENST00000369592 TEX2Q8IWB9 1127 aa23.66■■□□□ 1.38
SMNDC1-201ENST00000369592 AFG1LQ8WV93 481 aa23.66■■□□□ 1.38
SMNDC1-201ENST00000369592 IL17RAQ96F46 866 aa23.66■■□□□ 1.38
SMNDC1-201ENST00000369592 MTG1Q9BT17 334 aaPredicted RBP23.66■■□□□ 1.38
SMNDC1-201ENST00000369592 PSTPIP2Q9H939 334 aa23.66■■□□□ 1.38
SMNDC1-201ENST00000369592 V9GY48 417 aaPredicted RBP23.66■■□□□ 1.38
SMNDC1-201ENST00000369592 STAM2O75886 525 aa23.65■■□□□ 1.38
SMNDC1-201ENST00000369592 MMP3P08254 477 aa23.65■■□□□ 1.38
SMNDC1-201ENST00000369592 ICAM3P32942 547 aa23.65■■□□□ 1.38
SMNDC1-201ENST00000369592 SEMA3FQ13275 785 aa23.65■■□□□ 1.38
SMNDC1-201ENST00000369592 TOB2Q14106 344 aaPredicted RBP23.65■■□□□ 1.38
SMNDC1-201ENST00000369592 KCNV1Q6PIU1 500 aa23.65■■□□□ 1.38
SMNDC1-201ENST00000369592 GPKOWQ92917 476 aaPredicted RBP eCLIP23.65■■□□□ 1.38
SMNDC1-201ENST00000369592 MRVI1Q9Y6F6 885 aa23.65■■□□□ 1.38
SMNDC1-201ENST00000369592 TIMP1P01033 207 aa23.64■■□□□ 1.37
SMNDC1-201ENST00000369592 METAP2P50579 478 aaKnown RBP eCLIP23.64■■□□□ 1.37
SMNDC1-201ENST00000369592 NTRK3Q16288 839 aa23.64■■□□□ 1.37
SMNDC1-201ENST00000369592 BRDTQ58F21 947 aaPredicted RBP23.64■■□□□ 1.37
SMNDC1-201ENST00000369592 MYSM1Q5VVJ2 828 aa23.64■■□□□ 1.37
SMNDC1-201ENST00000369592 PCNX4Q63HM2 1172 aa23.64■■□□□ 1.37
SMNDC1-201ENST00000369592 XRRA1Q6P2D8 792 aa23.64■■□□□ 1.37
SMNDC1-201ENST00000369592 SMARCC2Q8TAQ2 1214 aa23.64■■□□□ 1.37
SMNDC1-201ENST00000369592 KAT2BQ92831 832 aa23.64■■□□□ 1.37
SMNDC1-201ENST00000369592 ZFP91Q96JP5 570 aaPredicted RBP23.64■■□□□ 1.37
SMNDC1-201ENST00000369592 UNC80Q8N2C7 3258 aa23.63■■□□□ 1.37
SMNDC1-201ENST00000369592 STXBP3O00186 592 aa23.63■■□□□ 1.37
SMNDC1-201ENST00000369592 MYL3P08590 195 aa23.63■■□□□ 1.37
SMNDC1-201ENST00000369592 EPHB4P54760 987 aa23.63■■□□□ 1.37
SMNDC1-201ENST00000369592 LAMC2Q13753 1193 aa23.63■■□□□ 1.37
SMNDC1-201ENST00000369592 CELF3Q5SZQ8 465 aaKnown RBP23.63■■□□□ 1.37
SMNDC1-201ENST00000369592 PPP1R18Q6NYC8 613 aa23.63■■□□□ 1.37
SMNDC1-201ENST00000369592 HEATR3Q7Z4Q2 680 aa23.63■■□□□ 1.37
SMNDC1-201ENST00000369592 PPTC7Q8NI37 304 aa23.63■■□□□ 1.37
SMNDC1-201ENST00000369592 CUL5Q93034 780 aa23.63■■□□□ 1.37
SMNDC1-201ENST00000369592 ALDH8A1Q9H2A2 487 aaPredicted RBP23.63■■□□□ 1.37
SMNDC1-201ENST00000369592 MTMR10Q9NXD2 777 aa23.63■■□□□ 1.37
SMNDC1-201ENST00000369592 DOCK5Q9H7D0 1870 aa23.62■■□□□ 1.37
SMNDC1-201ENST00000369592 CCDC196A0A1B0GTZ2 297 aa23.62■■□□□ 1.37
SMNDC1-201ENST00000369592 SPATA31C2B4DYI2 1134 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms