RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 A1CFQ9NQ94 594 aaKnown RBP26.96■■□□□ 1.91
SNX3-203ENST00000368979 CYP39A1Q9NYL5 469 aa26.96■■□□□ 1.91
SNX3-203ENST00000368979 KIF3CO14782 793 aa26.95■■□□□ 1.91
SNX3-203ENST00000368979 SLFN14P0C7P3 912 aa26.95■■□□□ 1.91
SNX3-203ENST00000368979 CCDC192P0DO97 292 aa26.95■■□□□ 1.91
SNX3-203ENST00000368979 C1QTNF8P60827 252 aa26.95■■□□□ 1.91
SNX3-203ENST00000368979 ANKRD23Q86SG2 305 aa26.95■■□□□ 1.91
SNX3-203ENST00000368979 IL31RAQ8NI17 732 aa26.95■■□□□ 1.91
SNX3-203ENST00000368979 FAM20AQ96MK3 541 aa26.95■■□□□ 1.91
SNX3-203ENST00000368979 PAGR1Q9BTK6 254 aa26.95■■□□□ 1.91
SNX3-203ENST00000368979 RBPJLQ9UBG7 517 aa26.95■■□□□ 1.91
SNX3-203ENST00000368979 FBXO40Q9UH90 709 aa26.95■■□□□ 1.91
SNX3-203ENST00000368979 BTBD19C9JJ37 291 aa26.95■■□□□ 1.9
SNX3-203ENST00000368979 MSH4O15457 936 aa26.95■■□□□ 1.9
SNX3-203ENST00000368979 MARCH6O60337 910 aa26.95■■□□□ 1.9
SNX3-203ENST00000368979 MDM2Q00987 491 aaPredicted RBP26.95■■□□□ 1.9
SNX3-203ENST00000368979 TYRO3Q06418 890 aa26.95■■□□□ 1.9
SNX3-203ENST00000368979 KARSQ15046 597 aaKnown RBP26.95■■□□□ 1.9
SNX3-203ENST00000368979 CEP55Q53EZ4 464 aa26.95■■□□□ 1.9
SNX3-203ENST00000368979 PCNX4Q63HM2 1172 aa26.95■■□□□ 1.9
SNX3-203ENST00000368979 KANK3Q6NY19 840 aa26.95■■□□□ 1.9
SNX3-203ENST00000368979 CABP7Q86V35 215 aa26.95■■□□□ 1.9
SNX3-203ENST00000368979 IQUBQ8NA54 791 aa26.95■■□□□ 1.9
SNX3-203ENST00000368979 GTF3C2Q8WUA4 911 aaPredicted RBP26.95■■□□□ 1.9
SNX3-203ENST00000368979 GJA10Q969M2 543 aa26.95■■□□□ 1.9
SNX3-203ENST00000368979 MMTAG2Q9BU76 263 aaKnown RBP26.95■■□□□ 1.9
SNX3-203ENST00000368979 TXNRD2Q9NNW7 524 aa26.95■■□□□ 1.9
SNX3-203ENST00000368979 PXMP2Q9NR77 195 aa26.95■■□□□ 1.9
SNX3-203ENST00000368979 DISC1Q9NRI5 854 aa26.95■■□□□ 1.9
SNX3-203ENST00000368979 KIAA1468Q9P260 1216 aa26.95■■□□□ 1.9
SNX3-203ENST00000368979 LRWD1Q9UFC0 647 aa26.95■■□□□ 1.9
SNX3-203ENST00000368979 PCDHA12Q9UN75 941 aa26.95■■□□□ 1.9
SNX3-203ENST00000368979 LCTP09848 1927 aa26.95■■□□□ 1.9
SNX3-203ENST00000368979 POTEMA6NI47 508 aa26.94■■□□□ 1.9
SNX3-203ENST00000368979 SETQ01105 290 aaPredicted RBP26.94■■□□□ 1.9
SNX3-203ENST00000368979 PGM5Q15124 567 aa26.94■■□□□ 1.9
SNX3-203ENST00000368979 SASS6Q6UVJ0 657 aa26.94■■□□□ 1.9
SNX3-203ENST00000368979 ERCC4Q92889 916 aaPredicted RBP26.94■■□□□ 1.9
SNX3-203ENST00000368979 RMDN3Q96TC7 470 aa26.94■■□□□ 1.9
SNX3-203ENST00000368979 PDCD2LQ9BRP1 358 aa26.94■■□□□ 1.9
SNX3-203ENST00000368979 MOV10L1Q9BXT6 1211 aaKnown RBP26.94■■□□□ 1.9
SNX3-203ENST00000368979 PDHXO00330 501 aa26.93■■□□□ 1.9
SNX3-203ENST00000368979 MEIS1O00470 390 aa26.93■■□□□ 1.9
SNX3-203ENST00000368979 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.93■■□□□ 1.9
SNX3-203ENST00000368979 SH3RF1Q7Z6J0 888 aa26.93■■□□□ 1.9
SNX3-203ENST00000368979 PLA2G4DQ86XP0 818 aa26.93■■□□□ 1.9
SNX3-203ENST00000368979 RASAL3Q86YV0 1011 aa26.93■■□□□ 1.9
SNX3-203ENST00000368979 MXRA8Q9BRK3 442 aa26.93■■□□□ 1.9
SNX3-203ENST00000368979 CCDC39Q9UFE4 941 aa26.93■■□□□ 1.9
SNX3-203ENST00000368979 HOOK1Q9UJC3 728 aaKnown RBP26.93■■□□□ 1.9
SNX3-203ENST00000368979 FOXN1O15353 648 aa26.92■■□□□ 1.9
SNX3-203ENST00000368979 SLC25A27O95847 323 aa26.92■■□□□ 1.9
SNX3-203ENST00000368979 EIF2AK2P19525 551 aaKnown RBP26.92■■□□□ 1.9
SNX3-203ENST00000368979 COPB2P35606 906 aa26.92■■□□□ 1.9
SNX3-203ENST00000368979 PDXDC2PQ6P474 469 aa26.92■■□□□ 1.9
SNX3-203ENST00000368979 NIPA1Q7RTP0 329 aa26.92■■□□□ 1.9
SNX3-203ENST00000368979 SAPCD2Q86UD0 394 aa26.92■■□□□ 1.9
SNX3-203ENST00000368979 CEP57L1Q8IYX8 460 aa26.92■■□□□ 1.9
SNX3-203ENST00000368979 PURBQ96QR8 312 aaKnown RBP26.92■■□□□ 1.9
SNX3-203ENST00000368979 RBSNQ9H1K0 784 aa26.92■■□□□ 1.9
SNX3-203ENST00000368979 TUBE1Q9UJT0 475 aa26.92■■□□□ 1.9
SNX3-203ENST00000368979 UBIAD1Q9Y5Z9 338 aa26.92■■□□□ 1.9
SNX3-203ENST00000368979 CYP2C8P10632 490 aa26.91■■□□□ 1.9
SNX3-203ENST00000368979 MRPS9P82933 396 aaKnown RBP26.91■■□□□ 1.9
SNX3-203ENST00000368979 SPIRE1Q08AE8 756 aa26.91■■□□□ 1.9
SNX3-203ENST00000368979 PNOCQ13519 176 aa26.91■■□□□ 1.9
SNX3-203ENST00000368979 POSTNQ15063 836 aa26.91■■□□□ 1.9
SNX3-203ENST00000368979 ARHGEF16Q5VV41 709 aa26.91■■□□□ 1.9
SNX3-203ENST00000368979 PFASO15067 1338 aa26.91■■□□□ 1.9
SNX3-203ENST00000368979 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.9■■□□□ 1.9
SNX3-203ENST00000368979 TESPA1A2RU30 521 aaPredicted RBP26.9■■□□□ 1.9
SNX3-203ENST00000368979 BCRP11274 1271 aa26.9■■□□□ 1.9
SNX3-203ENST00000368979 ITGB5P18084 799 aa26.9■■□□□ 1.9
SNX3-203ENST00000368979 NAALADL2Q58DX5 795 aa26.9■■□□□ 1.9
SNX3-203ENST00000368979 RRAGBQ5VZM2 374 aa26.9■■□□□ 1.9
SNX3-203ENST00000368979 NCAPG2Q86XI2 1143 aa26.9■■□□□ 1.9
SNX3-203ENST00000368979 CCDC34Q96HJ3 373 aa26.9■■□□□ 1.9
SNX3-203ENST00000368979 ERCC3P19447 782 aa26.9■■□□□ 1.9
SNX3-203ENST00000368979 STAT6P42226 847 aa26.9■■□□□ 1.9
SNX3-203ENST00000368979 Q3C1V9 767 aa26.9■■□□□ 1.9
SNX3-203ENST00000368979 XRRA1Q6P2D8 792 aa26.9■■□□□ 1.9
SNX3-203ENST00000368979 FAM43AQ8N2R8 423 aa26.9■■□□□ 1.9
SNX3-203ENST00000368979 SMC1BQ8NDV3 1235 aa26.9■■□□□ 1.9
SNX3-203ENST00000368979 RASSF8Q8NHQ8 419 aa26.9■■□□□ 1.9
SNX3-203ENST00000368979 SLC5A5Q92911 643 aa26.9■■□□□ 1.9
SNX3-203ENST00000368979 PAGE5Q96GU1 130 aa26.9■■□□□ 1.9
SNX3-203ENST00000368979 UIMC1Q96RL1 719 aa26.9■■□□□ 1.9
SNX3-203ENST00000368979 GRPEL1Q9HAV7 217 aa26.9■■□□□ 1.9
SNX3-203ENST00000368979 VAV3Q9UKW4 847 aa26.9■■□□□ 1.9
SNX3-203ENST00000368979 PRR29P0C7W0 189 aa26.89■■□□□ 1.89
SNX3-203ENST00000368979 ZNF157P51786 506 aaPredicted RBP26.89■■□□□ 1.89
SNX3-203ENST00000368979 KRT79Q5XKE5 535 aa26.89■■□□□ 1.89
SNX3-203ENST00000368979 RGMBQ6NW40 437 aa26.89■■□□□ 1.89
SNX3-203ENST00000368979 GRAMD1CQ8IYS0 662 aa26.89■■□□□ 1.89
SNX3-203ENST00000368979 NSUN6Q8TEA1 469 aaKnown RBP26.89■■□□□ 1.89
SNX3-203ENST00000368979 ZFP91Q96JP5 570 aaPredicted RBP26.89■■□□□ 1.89
SNX3-203ENST00000368979 PTPN18Q99952 460 aa26.89■■□□□ 1.89
SNX3-203ENST00000368979 ARP10275 920 aa26.88■■□□□ 1.89
SNX3-203ENST00000368979 PLCG1P19174 1290 aa26.88■■□□□ 1.89
SNX3-203ENST00000368979 MRE11P49959 708 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms