RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 MMP1P03956 469 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 PDHBP11177 359 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 CALML3P27482 149 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 STAT3P40763 770 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 NASPP49321 788 aaPredicted RBP10.07□□□□□ -0.8
SNX27-201ENST00000368838 UBE2HP62256 183 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 AKAP17AQ02040 695 aaKnown RBP10.07□□□□□ -0.8
SNX27-201ENST00000368838 TRIM29Q14134 588 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 TRIM60Q495X7 471 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 KRT40Q6A162 431 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 SH3RF1Q7Z6J0 888 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 CPXCR1Q8N123 301 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 SRBD1Q8N5C6 995 aaKnown RBP10.07□□□□□ -0.8
SNX27-201ENST00000368838 MB21D1Q8N884 522 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 DAGLBQ8NCG7 672 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 ARRDC4Q8NCT1 418 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 DCAF4Q8WV16 495 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 DDX11Q96FC9 970 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.07□□□□□ -0.8
SNX27-201ENST00000368838 RTEL1Q9NZ71 1219 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 PPP1R9AQ9ULJ8 1098 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 STX8Q9UNK0 236 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 RIPK3Q9Y572 518 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 LRRC37A2A6NM11 1700 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 NDUFB10O96000 172 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 PGK1P00558 417 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 PARP1P09874 1014 aaKnown RBP10.07□□□□□ -0.8
SNX27-201ENST00000368838 TRAPPC10P48553 1259 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 KCTD2Q14681 263 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 LRRC41Q15345 812 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 SAFBQ15424 915 aaKnown RBP eCLIP10.07□□□□□ -0.8
SNX27-201ENST00000368838 LRIT3Q3SXY7 679 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 RILPL1Q5EBL4 403 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 MYSM1Q5VVJ2 828 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 BTNL9Q6UXG8 535 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 SLC39A5Q6ZMH5 540 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 RIOX2Q8IUF8 465 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 LRRC47Q8N1G4 583 aaKnown RBP10.07□□□□□ -0.8
SNX27-201ENST00000368838 CCDC12Q8WUD4 166 aaPredicted RBP10.07□□□□□ -0.8
SNX27-201ENST00000368838 NUP133Q8WUM0 1156 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 PHF20Q9BVI0 1012 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 CLIP2Q9UDT6 1046 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 PRKAG2Q9UGJ0 569 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 ZNF214Q9UL59 606 aaPredicted RBP10.07□□□□□ -0.8
SNX27-201ENST00000368838 NAP1L2Q9ULW6 460 aaPredicted RBP10.07□□□□□ -0.8
SNX27-201ENST00000368838 ADAMTS5Q9UNA0 930 aa10.07□□□□□ -0.8
SNX27-201ENST00000368838 CUL9Q8IWT3 2517 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 KLRF2D3W0D1 207 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 F5H6K3 240 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 SLC25A27O95847 323 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 SCG2P13521 617 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 RXRAP19793 462 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 KLRC3Q07444 240 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 ZNF543Q08ER8 600 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 TRAF1Q13077 416 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 ORC2Q13416 577 aaPredicted RBP10.06□□□□□ -0.8
SNX27-201ENST00000368838 ZNF792Q3KQV3 632 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 C9orf50Q5SZB4 431 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 MCTP2Q6DN12 878 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 MCTP1Q6DN14 999 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 SNRNP48Q6IEG0 339 aaKnown RBP10.06□□□□□ -0.8
SNX27-201ENST00000368838 PPP1R18Q6NYC8 613 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 REPS2Q8NFH8 660 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 CCDC148Q8NFR7 591 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 BADQ92934 168 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 PHKBQ93100 1093 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 KIFC2Q96AC6 838 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 SLF1Q9BQI6 1058 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 TINF2Q9BSI4 451 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 MYL10Q9BUA6 226 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 SLC26A6Q9BXS9 759 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 MAF1Q9H063 256 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 OCEL1Q9H607 264 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 RAVER2Q9HCJ3 691 aaKnown RBP10.06□□□□□ -0.8
SNX27-201ENST00000368838 XPNPEP3Q9NQH7 507 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 MTMR10Q9NXD2 777 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 SLC5A4Q9NY91 659 aa10.06□□□□□ -0.8
SNX27-201ENST00000368838 A0A1W2PQ27 194 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 A0A1W2PQ64 194 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 A0A1W2PQD8 194 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 DLL1O00548 723 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 CYTH3O43739 400 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 PPP6R2O75170 966 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 PLEKHA8P1O95397 391 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 BMP15O95972 392 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 TLE2Q04725 743 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 DNM1Q05193 864 aaKnown RBP10.05□□□□□ -0.8
SNX27-201ENST00000368838 SHHQ15465 462 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 NPY5RQ15761 445 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 RASGRP2Q7LDG7 609 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 NOSTRINQ8IVI9 506 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 ABRAQ8N0Z2 381 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 KCNG4Q8TDN1 519 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 TNFRSF25Q93038 417 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 ZMYND12Q9H0C1 365 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 GLT8D2Q9H1C3 349 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 CDHR5Q9HBB8 845 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 HOMER2Q9NSB8 354 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 BARHL2Q9NY43 387 aa10.05□□□□□ -0.8
SNX27-201ENST00000368838 MTMR7Q9Y216 660 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms