RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 MCTP2Q6DN12 878 aa21.27■■□□□ 1
CHTOP-202ENST00000368687 CCSAPQ6IQ19 270 aaPredicted RBP21.27■■□□□ 1
CHTOP-202ENST00000368687 FAM177A1Q8N128 213 aaPredicted RBP21.27■■□□□ 1
CHTOP-202ENST00000368687 DDX49Q9Y6V7 483 aaKnown RBP21.27■■□□□ 1
CHTOP-202ENST00000368687 hCG_1642624A0A1W2PR95 340 aa21.26■□□□□ 0.99
CHTOP-202ENST00000368687 DYNC1LI2O43237 492 aaPredicted RBP21.26■□□□□ 0.99
CHTOP-202ENST00000368687 FOSP01100 380 aaPredicted RBP21.26■□□□□ 0.99
CHTOP-202ENST00000368687 TGFB3P10600 412 aa21.26■□□□□ 0.99
CHTOP-202ENST00000368687 ADCY7P51828 1080 aa21.26■□□□□ 0.99
CHTOP-202ENST00000368687 SLC39A5Q6ZMH5 540 aa21.26■□□□□ 0.99
CHTOP-202ENST00000368687 CCDC148Q8NFR7 591 aa21.26■□□□□ 0.99
CHTOP-202ENST00000368687 GPKOWQ92917 476 aaPredicted RBP eCLIP21.26■□□□□ 0.99
CHTOP-202ENST00000368687 RIC8AQ9NPQ8 531 aa21.26■□□□□ 0.99
CHTOP-202ENST00000368687 STARD7Q9NQZ5 370 aa21.26■□□□□ 0.99
CHTOP-202ENST00000368687 MROH7Q68CQ1 1323 aa21.26■□□□□ 0.99
CHTOP-202ENST00000368687 ESYT2A0FGR8 921 aa21.25■□□□□ 0.99
CHTOP-202ENST00000368687 STXBP3O00186 592 aa21.25■□□□□ 0.99
CHTOP-202ENST00000368687 KPNA6O60684 536 aa21.25■□□□□ 0.99
CHTOP-202ENST00000368687 ASGR1P07306 291 aa21.25■□□□□ 0.99
CHTOP-202ENST00000368687 NTRK3Q16288 839 aa21.25■□□□□ 0.99
CHTOP-202ENST00000368687 LRRC26Q2I0M4 334 aa21.25■□□□□ 0.99
CHTOP-202ENST00000368687 PCNX4Q63HM2 1172 aa21.25■□□□□ 0.99
CHTOP-202ENST00000368687 USP17L6PQ6QN14 398 aa21.25■□□□□ 0.99
CHTOP-202ENST00000368687 CHRDL2Q6WN34 429 aa21.25■□□□□ 0.99
CHTOP-202ENST00000368687 SEPT14Q6ZU15 432 aa21.25■□□□□ 0.99
CHTOP-202ENST00000368687 OR6J1Q8NGC5 347 aa21.25■□□□□ 0.99
CHTOP-202ENST00000368687 POLR3EQ9NVU0 708 aa21.25■□□□□ 0.99
CHTOP-202ENST00000368687 MRVI1Q9Y6F6 885 aa21.25■□□□□ 0.99
CHTOP-202ENST00000368687 SEC24BO95487 1268 aa21.24■□□□□ 0.99
CHTOP-202ENST00000368687 MYCLP12524 364 aaPredicted RBP21.24■□□□□ 0.99
CHTOP-202ENST00000368687 GNA11P29992 359 aa21.24■□□□□ 0.99
CHTOP-202ENST00000368687 CCT2P78371 535 aaKnown RBP21.24■□□□□ 0.99
CHTOP-202ENST00000368687 AP3B2Q13367 1082 aa21.24■□□□□ 0.99
CHTOP-202ENST00000368687 CCDC62Q6P9F0 684 aa21.24■□□□□ 0.99
CHTOP-202ENST00000368687 C7orf61Q8IZ16 206 aa21.24■□□□□ 0.99
CHTOP-202ENST00000368687 SLKQ9H2G2 1235 aaPredicted RBP21.24■□□□□ 0.99
CHTOP-202ENST00000368687 MYADML2A6NDP7 307 aa21.23■□□□□ 0.99
CHTOP-202ENST00000368687 CTAGE5O15320 804 aa21.23■□□□□ 0.99
CHTOP-202ENST00000368687 GH1P01241 217 aa21.23■□□□□ 0.99
CHTOP-202ENST00000368687 NEK4P51957 841 aa21.23■□□□□ 0.99
CHTOP-202ENST00000368687 ATN1P54259 1190 aaPredicted RBP21.23■□□□□ 0.99
CHTOP-202ENST00000368687 SSRP1Q08945 709 aaKnown RBP21.23■□□□□ 0.99
CHTOP-202ENST00000368687 BICD2Q8TD16 824 aa21.23■□□□□ 0.99
CHTOP-202ENST00000368687 EMID1Q96A84 441 aaPredicted RBP21.23■□□□□ 0.99
CHTOP-202ENST00000368687 FERMT2Q96AC1 680 aa21.23■□□□□ 0.99
CHTOP-202ENST00000368687 CDHR1Q96JP9 859 aa21.23■□□□□ 0.99
CHTOP-202ENST00000368687 SLC26A6Q9BXS9 759 aa21.23■□□□□ 0.99
CHTOP-202ENST00000368687 C6orf50Q9HD87 102 aa21.23■□□□□ 0.99
CHTOP-202ENST00000368687 SH3GLB2Q9NR46 395 aa21.23■□□□□ 0.99
CHTOP-202ENST00000368687 TRIOBPQ9H2D6 2365 aa21.23■□□□□ 0.99
CHTOP-202ENST00000368687 A0A0U1RQG5 324 aaPredicted RBP21.22■□□□□ 0.99
CHTOP-202ENST00000368687 SMCO2A6NFE2 343 aa21.22■□□□□ 0.99
CHTOP-202ENST00000368687 DEXIO95424 95 aa21.22■□□□□ 0.99
CHTOP-202ENST00000368687 AK2P54819 239 aa21.22■□□□□ 0.99
CHTOP-202ENST00000368687 RTP1P59025 263 aa21.22■□□□□ 0.99
CHTOP-202ENST00000368687 INPP4AQ96PE3 977 aaPredicted RBP21.22■□□□□ 0.99
CHTOP-202ENST00000368687 ZMYND12Q9H0C1 365 aa21.22■□□□□ 0.99
CHTOP-202ENST00000368687 PRO3102Q9H379 93 aa21.22■□□□□ 0.99
CHTOP-202ENST00000368687 NCOA5Q9HCD5 579 aaKnown RBP21.22■□□□□ 0.99
CHTOP-202ENST00000368687 PRKAG2Q9UGJ0 569 aa21.22■□□□□ 0.99
CHTOP-202ENST00000368687 A6NJR5 290 aa21.21■□□□□ 0.99
CHTOP-202ENST00000368687 PFKFB2O60825 505 aa21.21■□□□□ 0.99
CHTOP-202ENST00000368687 RBM25P49756 843 aaKnown RBP21.21■□□□□ 0.99
CHTOP-202ENST00000368687 LAMC2Q13753 1193 aa21.21■□□□□ 0.99
CHTOP-202ENST00000368687 NLRX1Q86UT6 975 aa21.21■□□□□ 0.99
CHTOP-202ENST00000368687 IL31RAQ8NI17 732 aa21.21■□□□□ 0.99
CHTOP-202ENST00000368687 PHKBQ93100 1093 aa21.21■□□□□ 0.99
CHTOP-202ENST00000368687 VTI1AQ96AJ9 217 aa21.21■□□□□ 0.99
CHTOP-202ENST00000368687 TOX2Q96NM4 488 aa21.21■□□□□ 0.99
CHTOP-202ENST00000368687 C22orf23Q9BZE7 217 aa21.21■□□□□ 0.99
CHTOP-202ENST00000368687 PCDH10Q9P2E7 1040 aa21.21■□□□□ 0.99
CHTOP-202ENST00000368687 DDX41Q9UJV9 622 aaKnown RBP21.21■□□□□ 0.99
CHTOP-202ENST00000368687 FIBPO43427 364 aa21.2■□□□□ 0.98
CHTOP-202ENST00000368687 ICAM3P32942 547 aa21.2■□□□□ 0.98
CHTOP-202ENST00000368687 BEX3Q00994 111 aa21.2■□□□□ 0.98
CHTOP-202ENST00000368687 STK3Q13188 491 aa21.2■□□□□ 0.98
CHTOP-202ENST00000368687 PKN1Q16512 942 aa21.2■□□□□ 0.98
CHTOP-202ENST00000368687 TYW1BQ6NUM6 668 aa21.2■□□□□ 0.98
CHTOP-202ENST00000368687 ANKRD33Q7Z3H0 272 aa21.2■□□□□ 0.98
CHTOP-202ENST00000368687 GIMAP8Q8ND71 665 aaPredicted RBP21.2■□□□□ 0.98
CHTOP-202ENST00000368687 TPCN1Q9ULQ1 816 aa21.2■□□□□ 0.98
CHTOP-202ENST00000368687 ZMYND8Q9ULU4 1186 aaPredicted RBP21.2■□□□□ 0.98
CHTOP-202ENST00000368687 PCDHA6Q9UN73 950 aa21.2■□□□□ 0.98
CHTOP-202ENST00000368687 ATP11BQ9Y2G3 1177 aa21.2■□□□□ 0.98
CHTOP-202ENST00000368687 PCDHA8Q9Y5H6 950 aa21.2■□□□□ 0.98
CHTOP-202ENST00000368687 MAFGO15525 162 aa21.19■□□□□ 0.98
CHTOP-202ENST00000368687 RGS20O76081 388 aa21.19■□□□□ 0.98
CHTOP-202ENST00000368687 ARIH2O95376 493 aa21.19■□□□□ 0.98
CHTOP-202ENST00000368687 NEDD9Q14511 834 aa21.19■□□□□ 0.98
CHTOP-202ENST00000368687 UBE2SQ16763 222 aa21.19■□□□□ 0.98
CHTOP-202ENST00000368687 LY6KQ17RY6 165 aa21.19■□□□□ 0.98
CHTOP-202ENST00000368687 TRIM60Q495X7 471 aa21.19■□□□□ 0.98
CHTOP-202ENST00000368687 DHX37Q8IY37 1157 aaKnown RBP21.19■□□□□ 0.98
CHTOP-202ENST00000368687 REXO1Q8N1G1 1221 aaKnown RBP21.19■□□□□ 0.98
CHTOP-202ENST00000368687 PPTC7Q8NI37 304 aa21.19■□□□□ 0.98
CHTOP-202ENST00000368687 GPRASP2Q96D09 838 aa21.19■□□□□ 0.98
CHTOP-202ENST00000368687 STK36Q9NRP7 1315 aa21.19■□□□□ 0.98
CHTOP-202ENST00000368687 MYH7BA7E2Y1 1941 aa21.19■□□□□ 0.98
CHTOP-202ENST00000368687 DCDC2CA8MYV0 355 aa21.18■□□□□ 0.98
CHTOP-202ENST00000368687 SYN1P17600 705 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms