RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 CDC27P30260 824 aa27.55■■■□□ 2
PFDN2-201ENST00000368010 CDK7P50613 346 aa27.55■■■□□ 2
PFDN2-201ENST00000368010 FUT2Q10981 343 aa27.55■■■□□ 2
PFDN2-201ENST00000368010 USP17L6PQ6QN14 398 aa27.55■■■□□ 2
PFDN2-201ENST00000368010 TM6SF1Q9BZW5 370 aa27.55■■■□□ 2
PFDN2-201ENST00000368010 PSTPIP2Q9H939 334 aa27.55■■■□□ 2
PFDN2-201ENST00000368010 FAM217BQ9NTX9 383 aaPredicted RBP27.55■■■□□ 2
PFDN2-201ENST00000368010 CYP46A1Q9Y6A2 500 aa27.55■■■□□ 2
PFDN2-201ENST00000368010 FRMPD4Q14CM0 1322 aa27.55■■■□□ 2
PFDN2-201ENST00000368010 MEIS2O14770 477 aa27.54■■■□□ 2
PFDN2-201ENST00000368010 MYL3P08590 195 aa27.54■■■□□ 2
PFDN2-201ENST00000368010 LY6KQ17RY6 165 aa27.54■■■□□ 2
PFDN2-201ENST00000368010 SH3RF1Q7Z6J0 888 aa27.54■■■□□ 2
PFDN2-201ENST00000368010 GPKOWQ92917 476 aaPredicted RBP eCLIP27.54■■■□□ 2
PFDN2-201ENST00000368010 UBE2OQ9C0C9 1292 aaKnown RBP27.54■■■□□ 2
PFDN2-201ENST00000368010 DDX41Q9UJV9 622 aaKnown RBP27.54■■■□□ 2
PFDN2-201ENST00000368010 NID2Q14112 1375 aa27.53■■■□□ 2
PFDN2-201ENST00000368010 A6NJR5 290 aa27.53■■■□□ 2
PFDN2-201ENST00000368010 PURAQ00577 322 aaKnown RBP27.53■■■□□ 2
PFDN2-201ENST00000368010 FAAP100Q0VG06 881 aa27.53■■■□□ 2
PFDN2-201ENST00000368010 ITGA7Q13683 1181 aa27.53■■■□□ 2
PFDN2-201ENST00000368010 KCNV1Q6PIU1 500 aa27.53■■■□□ 2
PFDN2-201ENST00000368010 SEZ6LQ9BYH1 1024 aa27.53■■■□□ 2
PFDN2-201ENST00000368010 TMEM39AQ9NV64 488 aa27.53■■■□□ 2
PFDN2-201ENST00000368010 V9GY48 417 aaPredicted RBP27.53■■■□□ 2
PFDN2-201ENST00000368010 TRIM43BA6NCK2 446 aa27.52■■■□□ 2
PFDN2-201ENST00000368010 KIAA0355O15063 1070 aa27.52■■■□□ 2
PFDN2-201ENST00000368010 KPNA6O60684 536 aa27.52■■■□□ 2
PFDN2-201ENST00000368010 EIF5BO60841 1220 aaKnown RBP27.52■■■□□ 2
PFDN2-201ENST00000368010 ADD1P35611 737 aaKnown RBP27.52■■■□□ 2
PFDN2-201ENST00000368010 ARHGAP1Q07960 439 aa27.52■■■□□ 2
PFDN2-201ENST00000368010 WWC2Q6AWC2 1192 aa27.52■■■□□ 2
PFDN2-201ENST00000368010 TRIM43Q96BQ3 446 aaPredicted RBP27.52■■■□□ 2
PFDN2-201ENST00000368010 MTG1Q9BT17 334 aaPredicted RBP27.52■■■□□ 2
PFDN2-201ENST00000368010 hCG_1984214I3L0E3 225 aa27.51■■□□□ 1.99
PFDN2-201ENST00000368010 TLR3O15455 904 aaKnown RBP27.51■■□□□ 1.99
PFDN2-201ENST00000368010 STAM2O75886 525 aa27.51■■□□□ 1.99
PFDN2-201ENST00000368010 RGS20O76081 388 aa27.51■■□□□ 1.99
PFDN2-201ENST00000368010 NAPAP54920 295 aa27.51■■□□□ 1.99
PFDN2-201ENST00000368010 PSMC6P62333 389 aa27.51■■□□□ 1.99
PFDN2-201ENST00000368010 PPP1R18Q6NYC8 613 aa27.51■■□□□ 1.99
PFDN2-201ENST00000368010 FAM126BQ8IXS8 530 aa27.51■■□□□ 1.99
PFDN2-201ENST00000368010 ZNF713Q8N859 430 aaPredicted RBP27.51■■□□□ 1.99
PFDN2-201ENST00000368010 SLC43A3Q8NBI5 491 aa27.51■■□□□ 1.99
PFDN2-201ENST00000368010 UPF3BQ9BZI7 483 aaKnown RBP27.51■■□□□ 1.99
PFDN2-201ENST00000368010 TRIOBPQ9H2D6 2365 aa27.51■■□□□ 1.99
PFDN2-201ENST00000368010 KIAA1217Q5T5P2 1943 aa27.51■■□□□ 1.99
PFDN2-201ENST00000368010 RAG1P15918 1043 aa27.5■■□□□ 1.99
PFDN2-201ENST00000368010 EVCP57679 992 aa27.5■■□□□ 1.99
PFDN2-201ENST00000368010 GNPTABQ3T906 1256 aa27.5■■□□□ 1.99
PFDN2-201ENST00000368010 AFG1LQ8WV93 481 aa27.5■■□□□ 1.99
PFDN2-201ENST00000368010 ZFP91Q96JP5 570 aaPredicted RBP27.5■■□□□ 1.99
PFDN2-201ENST00000368010 LTBP2Q14767 1821 aa27.5■■□□□ 1.99
PFDN2-201ENST00000368010 GRIN2DO15399 1336 aa27.49■■□□□ 1.99
PFDN2-201ENST00000368010 DNAH12Q6ZR08 3092 aa27.49■■□□□ 1.99
PFDN2-201ENST00000368010 XRRA1Q6P2D8 792 aa27.49■■□□□ 1.99
PFDN2-201ENST00000368010 TDHQ8IZJ6 230 aa27.49■■□□□ 1.99
PFDN2-201ENST00000368010 BADQ92934 168 aa27.49■■□□□ 1.99
PFDN2-201ENST00000368010 EMID1Q96A84 441 aaPredicted RBP27.49■■□□□ 1.99
PFDN2-201ENST00000368010 SPDYE3A6NKU9 549 aa27.48■■□□□ 1.99
PFDN2-201ENST00000368010 MMP3P08254 477 aa27.48■■□□□ 1.99
PFDN2-201ENST00000368010 TGFB3P10600 412 aa27.48■■□□□ 1.99
PFDN2-201ENST00000368010 FXR1P51114 621 aaKnown RBP eCLIP27.48■■□□□ 1.99
PFDN2-201ENST00000368010 MRPS9P82933 396 aaKnown RBP27.48■■□□□ 1.99
PFDN2-201ENST00000368010 LAMC2Q13753 1193 aa27.48■■□□□ 1.99
PFDN2-201ENST00000368010 TOB2Q14106 344 aaPredicted RBP27.48■■□□□ 1.99
PFDN2-201ENST00000368010 UBE2SQ16763 222 aa27.48■■□□□ 1.99
PFDN2-201ENST00000368010 PCNX4Q63HM2 1172 aa27.48■■□□□ 1.99
PFDN2-201ENST00000368010 TEX2Q8IWB9 1127 aa27.48■■□□□ 1.99
PFDN2-201ENST00000368010 DHX37Q8IY37 1157 aaKnown RBP27.48■■□□□ 1.99
PFDN2-201ENST00000368010 BARHL2Q9NY43 387 aa27.48■■□□□ 1.99
PFDN2-201ENST00000368010 TBX21Q9UL17 535 aa27.48■■□□□ 1.99
PFDN2-201ENST00000368010 PDIA3P30101 505 aaKnown RBP27.47■■□□□ 1.99
PFDN2-201ENST00000368010 ANAPC15P60006 121 aa27.47■■□□□ 1.99
PFDN2-201ENST00000368010 TYW1BQ6NUM6 668 aa27.47■■□□□ 1.99
PFDN2-201ENST00000368010 INPP4AQ96PE3 977 aaPredicted RBP27.47■■□□□ 1.99
PFDN2-201ENST00000368010 STXBP3O00186 592 aa27.46■■□□□ 1.99
PFDN2-201ENST00000368010 CD4P01730 458 aa27.46■■□□□ 1.99
PFDN2-201ENST00000368010 ITGB8P26012 769 aa27.46■■□□□ 1.99
PFDN2-201ENST00000368010 PFKFB3Q16875 520 aaPredicted RBP27.46■■□□□ 1.99
PFDN2-201ENST00000368010 RIC8AQ9NPQ8 531 aa27.46■■□□□ 1.99
PFDN2-201ENST00000368010 PDRG1Q9NUG6 133 aa27.46■■□□□ 1.99
PFDN2-201ENST00000368010 RTEL1Q9NZ71 1219 aa27.46■■□□□ 1.99
PFDN2-201ENST00000368010 FIBPO43427 364 aa27.45■■□□□ 1.98
PFDN2-201ENST00000368010 GGPS1O95749 300 aa27.45■■□□□ 1.98
PFDN2-201ENST00000368010 SCG2P13521 617 aa27.45■■□□□ 1.98
PFDN2-201ENST00000368010 UBA1P22314 1058 aaKnown RBP27.45■■□□□ 1.98
PFDN2-201ENST00000368010 ICAM3P32942 547 aa27.45■■□□□ 1.98
PFDN2-201ENST00000368010 ADCY7P51828 1080 aa27.45■■□□□ 1.98
PFDN2-201ENST00000368010 AKAP17AQ02040 695 aaKnown RBP27.45■■□□□ 1.98
PFDN2-201ENST00000368010 PPTC7Q8NI37 304 aa27.45■■□□□ 1.98
PFDN2-201ENST00000368010 EHMT1Q9H9B1 1298 aa27.45■■□□□ 1.98
PFDN2-201ENST00000368010 PCDHA6Q9UN73 950 aa27.45■■□□□ 1.98
PFDN2-201ENST00000368010 PCDHA8Q9Y5H6 950 aa27.45■■□□□ 1.98
PFDN2-201ENST00000368010 CCT2P78371 535 aaKnown RBP27.44■■□□□ 1.98
PFDN2-201ENST00000368010 DGKDQ16760 1214 aa27.44■■□□□ 1.98
PFDN2-201ENST00000368010 CELF3Q5SZQ8 465 aaKnown RBP27.44■■□□□ 1.98
PFDN2-201ENST00000368010 MYSM1Q5VVJ2 828 aa27.44■■□□□ 1.98
PFDN2-201ENST00000368010 GLT8D2Q9H1C3 349 aa27.44■■□□□ 1.98
PFDN2-201ENST00000368010 ALDH8A1Q9H2A2 487 aaPredicted RBP27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms