RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 PIP4K2CQ8TBX8 421 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 NLRP3Q96P20 1036 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 EXOC1Q9NV70 894 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 MCM9Q9NXL9 1143 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 ZSWIM5Q9P217 1185 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 PLAAQ9Y263 795 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 SH3BP1Q9Y3L3 701 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 LOC102724428A0A0B4J2F2 783 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 HMGB1P1B2RPK0 211 aaPredicted RBP12.81□□□□□ -0.36
PRKN-206ENST00000366898 DKC1O60832 514 aaKnown RBP eCLIP12.81□□□□□ -0.362e-6■■■■■ 33.3
PRKN-206ENST00000366898 GNAT2P19087 354 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 SIK1P57059 783 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 CHRNDQ07001 517 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 RAPGEF1Q13905 1077 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 DTNBP1Q96EV8 351 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 ETNK1Q9HBU6 452 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 F8W031 263 aaPredicted RBP12.81□□□□□ -0.36
PRKN-206ENST00000366898 UBE2Q2LH0YL09 131 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 GNPATO15228 680 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 SUPT3HO75486 399 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 MX2P20592 715 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 ASIC1P78348 528 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 EHHADHQ08426 723 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 USPL1Q5W0Q7 1092 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 EMBQ6PCB8 327 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 DPF2Q92785 391 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 BICD1Q96G01 975 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 HPCAL4Q9UM19 191 aa12.81□□□□□ -0.36
PRKN-206ENST00000366898 MAP3K7O43318 606 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 NR5A1Q13285 461 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 REXO1L1PQ8IX06 675 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 LINC00301Q8NCQ3 95 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 USP6NLQ92738 828 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 TMEM87BQ96K49 555 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 NUDCD1Q96RS6 583 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 CTTNBP2NLQ9P2B4 639 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 VWA3AA6NCI4 1184 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 IKBKBO14920 756 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 PECAM1P16284 738 aaPredicted RBP12.8□□□□□ -0.36
PRKN-206ENST00000366898 ERCC5P28715 1186 aaPredicted RBP12.8□□□□□ -0.36
PRKN-206ENST00000366898 PCYT1AP49585 367 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 DYNLL1P63167 89 aaKnown RBP12.8□□□□□ -0.36
PRKN-206ENST00000366898 PRPF31Q8WWY3 499 aaKnown RBP12.8□□□□□ -0.36
PRKN-206ENST00000366898 SPZ1Q9BXG8 430 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 ZFATQ9P243 1243 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 ZNF219Q9P2Y4 722 aaPredicted RBP12.8□□□□□ -0.36
PRKN-206ENST00000366898 SPECC1L-ADORA2AF8WAN1 911 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 RNF8O76064 485 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 MCM7P33993 719 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 MAGOHP61326 146 aaKnown RBP12.8□□□□□ -0.36
PRKN-206ENST00000366898 SEPT2Q15019 361 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 SLC9C1Q4G0N8 1177 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 GRAMD1CQ8IYS0 662 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 C3orf20Q8ND61 904 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 LRRC8CQ8TDW0 803 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 MAGOHBQ96A72 148 aaKnown RBP12.8□□□□□ -0.36
PRKN-206ENST00000366898 BLZF1Q9H2G9 400 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 MLXIPLQ9NP71 852 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 NLRC4Q9NPP4 1024 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 PFDN4Q9NQP4 134 aa12.8□□□□□ -0.36
PRKN-206ENST00000366898 TMED10P49755 219 aaKnown RBP12.79□□□□□ -0.36
PRKN-206ENST00000366898 DHX9Q08211 1270 aaKnown RBP12.79□□□□□ -0.36
PRKN-206ENST00000366898 ST13P4Q8IZP2 240 aaPredicted RBP12.79□□□□□ -0.36
PRKN-206ENST00000366898 CFAP57Q96MR6 1250 aa12.79□□□□□ -0.36
PRKN-206ENST00000366898 SYNCQ9H7C4 482 aa12.79□□□□□ -0.36
PRKN-206ENST00000366898 BZW2Q9Y6E2 419 aaKnown RBP12.79□□□□□ -0.36
PRKN-206ENST00000366898 KIF23Q02241 960 aaPredicted RBP12.79□□□□□ -0.36
PRKN-206ENST00000366898 UAP1Q16222 522 aaPredicted RBP12.79□□□□□ -0.36
PRKN-206ENST00000366898 PREPLQ4J6C6 727 aaPredicted RBP12.79□□□□□ -0.36
PRKN-206ENST00000366898 NANOGNBQ7Z5D8 188 aa12.79□□□□□ -0.36
PRKN-206ENST00000366898 CSGALNACT2Q8N6G5 542 aa12.79□□□□□ -0.36
PRKN-206ENST00000366898 SPATA17Q96L03 361 aa12.79□□□□□ -0.36
PRKN-206ENST00000366898 MYO1AQ9UBC5 1043 aa12.79□□□□□ -0.36
PRKN-206ENST00000366898 ADGRG1Q9Y653 693 aa12.79□□□□□ -0.36
PRKN-206ENST00000366898 KIF28PB7ZC32 967 aa12.79□□□□□ -0.36
PRKN-206ENST00000366898 USP17L12C9JPN9 530 aa12.79□□□□□ -0.36
PRKN-206ENST00000366898 USP17L21D6R901 530 aa12.79□□□□□ -0.36
PRKN-206ENST00000366898 KRIT1O00522 736 aa12.79□□□□□ -0.36
PRKN-206ENST00000366898 MMEP08473 750 aa12.79□□□□□ -0.36
PRKN-206ENST00000366898 KRT15P19012 456 aa12.79□□□□□ -0.36
PRKN-206ENST00000366898 EXOSC10Q01780 885 aaKnown RBP12.79□□□□□ -0.36
PRKN-206ENST00000366898 IKQ13123 557 aaPredicted RBP12.79□□□□□ -0.36
PRKN-206ENST00000366898 DHX40Q8IX18 779 aaKnown RBP12.79□□□□□ -0.36
PRKN-206ENST00000366898 SMYD4Q8IYR2 804 aaPredicted RBP12.79□□□□□ -0.36
PRKN-206ENST00000366898 ZNF444Q8N0Y2 327 aaPredicted RBP12.79□□□□□ -0.36
PRKN-206ENST00000366898 SAP30BPQ9UHR5 308 aaKnown RBP12.79□□□□□ -0.36
PRKN-206ENST00000366898 NEDD4P46934 1319 aa12.79□□□□□ -0.36
PRKN-206ENST00000366898 MROH5Q6ZUA9 1318 aa12.79□□□□□ -0.36
PRKN-206ENST00000366898 C6orf229H3BNL8 230 aa12.78□□□□□ -0.36
PRKN-206ENST00000366898 TMOD1P28289 359 aa12.78□□□□□ -0.36
PRKN-206ENST00000366898 SERPINB3P29508 390 aa12.78□□□□□ -0.36
PRKN-206ENST00000366898 CDC27P30260 824 aa12.78□□□□□ -0.36
PRKN-206ENST00000366898 ATICP31939 592 aa12.78□□□□□ -0.36
PRKN-206ENST00000366898 MDH1P40925 334 aaKnown RBP12.78□□□□□ -0.36
PRKN-206ENST00000366898 CETN2P41208 172 aa12.78□□□□□ -0.36
PRKN-206ENST00000366898 CASP7P55210 303 aa12.78□□□□□ -0.36
PRKN-206ENST00000366898 PAK1Q13153 545 aa12.78□□□□□ -0.36
PRKN-206ENST00000366898 TSGA10IPQ3SY00 556 aa12.78□□□□□ -0.36
PRKN-206ENST00000366898 RCSD1Q6JBY9 416 aa12.78□□□□□ -0.36
PRKN-206ENST00000366898 RRAGAQ7L523 313 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms