RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 TBC1D10CQ8IV04 446 aa14.48□□□□□ -0.09
MRPL55-209ENST00000366735 PNMA1Q8ND90 353 aa14.48□□□□□ -0.09
MRPL55-209ENST00000366735 CAGE1Q8TC20 777 aa14.48□□□□□ -0.09
MRPL55-209ENST00000366735 PHOSPHO2Q8TCD6 241 aa14.48□□□□□ -0.09
MRPL55-209ENST00000366735 FTOQ9C0B1 505 aaKnown RBP eCLIP14.48□□□□□ -0.09
MRPL55-209ENST00000366735 DIAPH3Q9NSV4 1193 aa14.48□□□□□ -0.09
MRPL55-209ENST00000366735 NEDD4P46934 1319 aa14.47□□□□□ -0.09
MRPL55-209ENST00000366735 DHX16O60231 1041 aaKnown RBP14.47□□□□□ -0.09
MRPL55-209ENST00000366735 BAIAP3O94812 1187 aa14.47□□□□□ -0.09
MRPL55-209ENST00000366735 PARNO95453 639 aaKnown RBP14.47□□□□□ -0.09
MRPL55-209ENST00000366735 GH1P01241 217 aa14.47□□□□□ -0.09
MRPL55-209ENST00000366735 RABGGTBP53611 331 aa14.47□□□□□ -0.09
MRPL55-209ENST00000366735 ADGRE1Q14246 886 aa14.47□□□□□ -0.09
MRPL55-209ENST00000366735 CCDC85BQ15834 202 aaPredicted RBP14.47□□□□□ -0.09
MRPL55-209ENST00000366735 TMEM63BQ5T3F8 832 aa14.47□□□□□ -0.09
MRPL55-209ENST00000366735 MICALL1Q8N3F8 863 aa14.47□□□□□ -0.09
MRPL55-209ENST00000366735 NSUN6Q8TEA1 469 aaKnown RBP14.47□□□□□ -0.09
MRPL55-209ENST00000366735 AFAP1L1Q8TED9 768 aa14.47□□□□□ -0.09
MRPL55-209ENST00000366735 KATNAL1Q9BW62 490 aa14.47□□□□□ -0.09
MRPL55-209ENST00000366735 LNPKQ9C0E8 428 aa14.47□□□□□ -0.09
MRPL55-209ENST00000366735 SLC24A3Q9HC58 644 aa14.47□□□□□ -0.09
MRPL55-209ENST00000366735 MICAL3Q7RTP6 2002 aa14.46□□□□□ -0.09
MRPL55-209ENST00000366735 KAT6AQ92794 2004 aa14.46□□□□□ -0.09
MRPL55-209ENST00000366735 IQCF3P0C7M6 154 aa14.46□□□□□ -0.09
MRPL55-209ENST00000366735 PYGBP11216 843 aa14.46□□□□□ -0.09
MRPL55-209ENST00000366735 SDSP20132 328 aa14.46□□□□□ -0.09
MRPL55-209ENST00000366735 CASTP20810 708 aaKnown RBP14.46□□□□□ -0.09
MRPL55-209ENST00000366735 KCNJ6P48051 423 aa14.46□□□□□ -0.09
MRPL55-209ENST00000366735 IMMTQ16891 758 aaKnown RBP14.46□□□□□ -0.09
MRPL55-209ENST00000366735 CHD1LQ86WJ1 897 aa14.46□□□□□ -0.09
MRPL55-209ENST00000366735 ADAMTS19Q8TE59 1207 aa14.46□□□□□ -0.09
MRPL55-209ENST00000366735 IWS1Q96ST2 819 aa14.46□□□□□ -0.09
MRPL55-209ENST00000366735 CNNM2Q9H8M5 875 aa14.46□□□□□ -0.09
MRPL55-209ENST00000366735 MRPL11Q9Y3B7 192 aaKnown RBP14.46□□□□□ -0.09
MRPL55-209ENST00000366735 CA3P07451 260 aa14.45□□□□□ -0.1
MRPL55-209ENST00000366735 PARP1P09874 1014 aaKnown RBP14.45□□□□□ -0.1
MRPL55-209ENST00000366735 GOLGA8HP0CJ92 632 aa14.45□□□□□ -0.1
MRPL55-209ENST00000366735 CHMP4BP1P59074 171 aa14.45□□□□□ -0.1
MRPL55-209ENST00000366735 SKIV2LQ15477 1246 aaKnown RBP14.45□□□□□ -0.1
MRPL55-209ENST00000366735 STXBP2Q15833 593 aa14.45□□□□□ -0.1
MRPL55-209ENST00000366735 PTGISQ16647 500 aa14.45□□□□□ -0.1
MRPL55-209ENST00000366735 SKAP1Q86WV1 359 aa14.45□□□□□ -0.1
MRPL55-209ENST00000366735 FBXO11Q86XK2 927 aa14.45□□□□□ -0.1
MRPL55-209ENST00000366735 UHRF1Q96T88 793 aaPredicted RBP14.45□□□□□ -0.1
MRPL55-209ENST00000366735 ZKSCAN3Q9BRR0 538 aa14.45□□□□□ -0.1
MRPL55-209ENST00000366735 UBAC1Q9BSL1 405 aa14.45□□□□□ -0.1
MRPL55-209ENST00000366735 KRT23Q9C075 422 aa14.45□□□□□ -0.1
MRPL55-209ENST00000366735 CTNNA3Q9UI47 895 aa14.45□□□□□ -0.1
MRPL55-209ENST00000366735 MUC3AQ02505 3323 aa14.44□□□□□ -0.1
MRPL55-209ENST00000366735 KDM4AO75164 1064 aa14.44□□□□□ -0.1
MRPL55-209ENST00000366735 MMP3P08254 477 aa14.44□□□□□ -0.1
MRPL55-209ENST00000366735 DGKDQ16760 1214 aa14.44□□□□□ -0.1
MRPL55-209ENST00000366735 ARHGEF16Q5VV41 709 aa14.44□□□□□ -0.1
MRPL55-209ENST00000366735 SEPT14Q6ZU15 432 aa14.44□□□□□ -0.1
MRPL55-209ENST00000366735 SESTD1Q86VW0 696 aa14.44□□□□□ -0.1
MRPL55-209ENST00000366735 COPS5Q92905 334 aa14.44□□□□□ -0.1
MRPL55-209ENST00000366735 ZSCAN10Q96SZ4 725 aaPredicted RBP14.44□□□□□ -0.1
MRPL55-209ENST00000366735 RMDN3Q96TC7 470 aa14.44□□□□□ -0.1
MRPL55-209ENST00000366735 DSCC1Q9BVC3 393 aa14.44□□□□□ -0.1
MRPL55-209ENST00000366735 TTC28Q96AY4 2481 aa14.44□□□□□ -0.1
MRPL55-209ENST00000366735 CHD9Q3L8U1 2897 aa14.44□□□□□ -0.1
MRPL55-209ENST00000366735 NLRC5Q86WI3 1866 aa14.44□□□□□ -0.1
MRPL55-209ENST00000366735 PRRC2BQ5JSZ5 2229 aaKnown RBP14.43□□□□□ -0.1
MRPL55-209ENST00000366735 EFCAB14O75071 495 aa14.43□□□□□ -0.1
MRPL55-209ENST00000366735 MYOGP15173 224 aa14.43□□□□□ -0.1
MRPL55-209ENST00000366735 PDE4AP27815 886 aa14.43□□□□□ -0.1
MRPL55-209ENST00000366735 TRAF1Q13077 416 aa14.43□□□□□ -0.1
MRPL55-209ENST00000366735 CWC27Q6UX04 472 aaKnown RBP14.43□□□□□ -0.1
MRPL55-209ENST00000366735 HERC6Q8IVU3 1022 aa14.43□□□□□ -0.1
MRPL55-209ENST00000366735 ADGRF4Q8IZF3 695 aa14.43□□□□□ -0.1
MRPL55-209ENST00000366735 C7orf31Q8N865 590 aa14.43□□□□□ -0.1
MRPL55-209ENST00000366735 AFG1LQ8WV93 481 aa14.43□□□□□ -0.1
MRPL55-209ENST00000366735 UBA5Q9GZZ9 404 aa14.43□□□□□ -0.1
MRPL55-209ENST00000366735 OSBPL3Q9H4L5 887 aa14.43□□□□□ -0.1
MRPL55-209ENST00000366735 CHD7Q9P2D1 2997 aa14.43□□□□□ -0.1
MRPL55-209ENST00000366735 MRVI1Q9Y6F6 885 aa14.43□□□□□ -0.1
MRPL55-209ENST00000366735 NCOR1O75376 2440 aa14.43□□□□□ -0.1
MRPL55-209ENST00000366735 DOCK5Q9H7D0 1870 aa14.42□□□□□ -0.1
MRPL55-209ENST00000366735 B4E1Z4 1266 aa14.42□□□□□ -0.1
MRPL55-209ENST00000366735 TLL1O43897 1013 aa14.42□□□□□ -0.1
MRPL55-209ENST00000366735 ARIH2O95376 493 aa14.42□□□□□ -0.1
MRPL55-209ENST00000366735 SELPP16109 830 aa14.42□□□□□ -0.1
MRPL55-209ENST00000366735 POU3F3P20264 500 aaPredicted RBP14.42□□□□□ -0.1
MRPL55-209ENST00000366735 QRICH1Q2TAL8 776 aa14.42□□□□□ -0.1
MRPL55-209ENST00000366735 IFIT1BQ5T764 474 aaKnown RBP14.42□□□□□ -0.1
MRPL55-209ENST00000366735 CCDC62Q6P9F0 684 aa14.42□□□□□ -0.1
MRPL55-209ENST00000366735 CNKSR3Q6P9H4 555 aa14.42□□□□□ -0.1
MRPL55-209ENST00000366735 KCNV1Q6PIU1 500 aa14.42□□□□□ -0.1
MRPL55-209ENST00000366735 LRRC8DQ7L1W4 858 aa14.42□□□□□ -0.1
MRPL55-209ENST00000366735 CHST3Q7LGC8 479 aa14.42□□□□□ -0.1
MRPL55-209ENST00000366735 SAMD3Q8N6K7 520 aa14.42□□□□□ -0.1
MRPL55-209ENST00000366735 SYTL5Q8TDW5 730 aaPredicted RBP14.42□□□□□ -0.1
MRPL55-209ENST00000366735 ANKS1AQ92625 1134 aa14.42□□□□□ -0.1
MRPL55-209ENST00000366735 EMID1Q96A84 441 aaPredicted RBP14.42□□□□□ -0.1
MRPL55-209ENST00000366735 AMNQ9BXJ7 453 aa14.42□□□□□ -0.1
MRPL55-209ENST00000366735 MAP3K20Q9NYL2 800 aaKnown RBP14.42□□□□□ -0.1
MRPL55-209ENST00000366735 COG5Q9UP83 839 aa14.42□□□□□ -0.1
MRPL55-209ENST00000366735 RALGAPA2Q2PPJ7 1873 aa14.42□□□□□ -0.1
MRPL55-209ENST00000366735 EIF3JO75822 258 aaKnown RBP14.41□□□□□ -0.1
MRPL55-209ENST00000366735 CFBP00751 764 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms