RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 ZBTB1Q9Y2K1 713 aa10.06□□□□□ -0.8
YBX3-204ENST00000366290 KIAA1551Q9HCM1 1747 aa10.05□□□□□ -0.8
YBX3-204ENST00000366290 COL15A1P39059 1388 aa10.05□□□□□ -0.8
YBX3-204ENST00000366290 KCNQ3O43525 872 aa10.05□□□□□ -0.8
YBX3-204ENST00000366290 UBOX5O94941 541 aa10.05□□□□□ -0.8
YBX3-204ENST00000366290 MMP10P09238 476 aa10.05□□□□□ -0.8
YBX3-204ENST00000366290 DCTN1Q14203 1278 aa10.05□□□□□ -0.8
YBX3-204ENST00000366290 NFKBIBQ15653 356 aa10.05□□□□□ -0.8
YBX3-204ENST00000366290 FXNQ16595 210 aa10.05□□□□□ -0.8
YBX3-204ENST00000366290 DDR2Q16832 855 aa10.05□□□□□ -0.8
YBX3-204ENST00000366290 ZMYM1Q5SVZ6 1142 aa10.05□□□□□ -0.8
YBX3-204ENST00000366290 PAOXQ6QHF9 649 aa10.05□□□□□ -0.8
YBX3-204ENST00000366290 CCDC146Q8IYE0 955 aa10.05□□□□□ -0.8
YBX3-204ENST00000366290 PSMG3-AS1Q96PY0 264 aa10.05□□□□□ -0.8
YBX3-204ENST00000366290 ST7Q9NRC1 585 aa10.05□□□□□ -0.8
YBX3-204ENST00000366290 NARFQ9UHQ1 456 aa10.05□□□□□ -0.8
YBX3-204ENST00000366290 LTBP3Q9NS15 1303 aa10.05□□□□□ -0.8
YBX3-204ENST00000366290 MAPK8IP3Q9UPT6 1336 aa10.05□□□□□ -0.8
YBX3-204ENST00000366290 NRXN2Q9P2S2 1712 aa10.04□□□□□ -0.8
YBX3-204ENST00000366290 SNRPA1P09661 255 aaKnown RBP10.04□□□□□ -0.8
YBX3-204ENST00000366290 GBP1P32455 592 aa10.04□□□□□ -0.8
YBX3-204ENST00000366290 IL6STP40189 918 aaPredicted RBP10.04□□□□□ -0.8
YBX3-204ENST00000366290 CDK5R2Q13319 367 aa10.04□□□□□ -0.8
YBX3-204ENST00000366290 BMS1Q14692 1282 aaKnown RBP10.04□□□□□ -0.8
YBX3-204ENST00000366290 XP32Q5T750 250 aa10.04□□□□□ -0.8
YBX3-204ENST00000366290 PRR23CQ6ZRP0 262 aa10.04□□□□□ -0.8
YBX3-204ENST00000366290 CLEC10AQ8IUN9 316 aa10.04□□□□□ -0.8
YBX3-204ENST00000366290 MICAL1Q8TDZ2 1067 aa10.04□□□□□ -0.8
YBX3-204ENST00000366290 MIPEPQ99797 713 aa10.04□□□□□ -0.8
YBX3-204ENST00000366290 C1GALT1Q9NS00 363 aa10.04□□□□□ -0.8
YBX3-204ENST00000366290 BABAM1Q9NWV8 329 aa10.04□□□□□ -0.8
YBX3-204ENST00000366290 C10orf71Q711Q0 1435 aa10.04□□□□□ -0.8
YBX3-204ENST00000366290 LAMB4A4D0S4 1761 aa10.03□□□□□ -0.8
YBX3-204ENST00000366290 SCN7AQ01118 1682 aa10.03□□□□□ -0.8
YBX3-204ENST00000366290 A0A087WZG4 1122 aa10.03□□□□□ -0.8
YBX3-204ENST00000366290 TM4SF1P30408 202 aa10.03□□□□□ -0.8
YBX3-204ENST00000366290 BRCA1P38398 1863 aaKnown RBP10.03□□□□□ -0.8
YBX3-204ENST00000366290 TMPOP42166 694 aaKnown RBP10.03□□□□□ -0.8
YBX3-204ENST00000366290 LETMD1Q6P1Q0 360 aa10.03□□□□□ -0.8
YBX3-204ENST00000366290 PPP1R13LQ8WUF5 828 aa10.03□□□□□ -0.8
YBX3-204ENST00000366290 MKL1Q969V6 931 aa10.03□□□□□ -0.8
YBX3-204ENST00000366290 RUNDC1Q96C34 613 aa10.03□□□□□ -0.8
YBX3-204ENST00000366290 PIF1Q9H611 641 aa10.03□□□□□ -0.8
YBX3-204ENST00000366290 PHAXQ9H814 394 aaKnown RBP10.03□□□□□ -0.8
YBX3-204ENST00000366290 PRDM10Q9NQV6 1147 aa10.03□□□□□ -0.8
YBX3-204ENST00000366290 SRP68Q9UHB9 627 aaKnown RBP10.03□□□□□ -0.8
YBX3-204ENST00000366290 MAPK8IP1Q9UQF2 711 aa10.03□□□□□ -0.8
YBX3-204ENST00000366290 SLITRK5O94991 958 aa10.02□□□□□ -0.81
YBX3-204ENST00000366290 RIPK4P57078 832 aa10.02□□□□□ -0.81
YBX3-204ENST00000366290 TGFB2P61812 414 aa10.02□□□□□ -0.81
YBX3-204ENST00000366290 LMOD3Q0VAK6 560 aa10.02□□□□□ -0.81
YBX3-204ENST00000366290 C6orf15Q6UXA7 325 aaPredicted RBP10.02□□□□□ -0.81
YBX3-204ENST00000366290 TMEM192Q8IY95 271 aa10.02□□□□□ -0.81
YBX3-204ENST00000366290 FAM9BQ8IZU0 186 aa10.02□□□□□ -0.81
YBX3-204ENST00000366290 DNAJB8Q8NHS0 232 aa10.02□□□□□ -0.81
YBX3-204ENST00000366290 SLC6A18Q96N87 628 aa10.02□□□□□ -0.81
YBX3-204ENST00000366290 FAM83CQ9BQN1 747 aa10.02□□□□□ -0.81
YBX3-204ENST00000366290 AFDNP55196 1824 aaKnown RBP10.02□□□□□ -0.81
YBX3-204ENST00000366290 BCORQ6W2J9 1755 aa10.01□□□□□ -0.81
YBX3-204ENST00000366290 POLRMTO00411 1230 aaKnown RBP10.01□□□□□ -0.81
YBX3-204ENST00000366290 DDAH1O94760 285 aa10.01□□□□□ -0.81
YBX3-204ENST00000366290 EIF4A1P60842 406 aaKnown RBP10.01□□□□□ -0.81
YBX3-204ENST00000366290 DDR1Q08345 913 aa10.01□□□□□ -0.81
YBX3-204ENST00000366290 TOP6BLQ8N6T0 577 aa10.01□□□□□ -0.81
YBX3-204ENST00000366290 ZNF526Q8TF50 670 aaPredicted RBP10.01□□□□□ -0.81
YBX3-204ENST00000366290 DHRS1Q96LJ7 313 aa10.01□□□□□ -0.81
YBX3-204ENST00000366290 ZNF214Q9UL59 606 aaPredicted RBP10.01□□□□□ -0.81
YBX3-204ENST00000366290 PCDHB10Q9UN67 800 aa10.01□□□□□ -0.81
YBX3-204ENST00000366290 CEP131Q9UPN4 1083 aa10.01□□□□□ -0.81
YBX3-204ENST00000366290 RAXQ9Y2V3 346 aa10.01□□□□□ -0.81
YBX3-204ENST00000366290 MSRB2Q9Y3D2 182 aa10.01□□□□□ -0.81
YBX3-204ENST00000366290 USP16Q9Y5T5 823 aa10.01□□□□□ -0.81
YBX3-204ENST00000366290 PXDNLA1KZ92 1463 aa10.01□□□□□ -0.81
YBX3-204ENST00000366290 CCDC85CA6NKD9 419 aa10□□□□□ -0.81
YBX3-204ENST00000366290 B2RBV5 119 aa10□□□□□ -0.81
YBX3-204ENST00000366290 APAF1O14727 1248 aa10□□□□□ -0.81
YBX3-204ENST00000366290 GJB6O95452 261 aa10□□□□□ -0.81
YBX3-204ENST00000366290 A1BGP04217 495 aa10□□□□□ -0.81
YBX3-204ENST00000366290 HSPA6P17066 643 aa10□□□□□ -0.81
YBX3-204ENST00000366290 KCNA3P22001 575 aa10□□□□□ -0.81
YBX3-204ENST00000366290 CANXP27824 592 aaKnown RBP10□□□□□ -0.81
YBX3-204ENST00000366290 RASA3Q14644 834 aa10□□□□□ -0.81
YBX3-204ENST00000366290 VHLLQ6RSH7 139 aa10□□□□□ -0.81
YBX3-204ENST00000366290 FAM178BQ8IXR5 827 aa10□□□□□ -0.81
YBX3-204ENST00000366290 RIN3Q8TB24 985 aa10□□□□□ -0.81
YBX3-204ENST00000366290 SRPK1Q96SB4 655 aaKnown RBP10□□□□□ -0.81
YBX3-204ENST00000366290 THUMPD2Q9BTF0 503 aaKnown RBP10□□□□□ -0.81
YBX3-204ENST00000366290 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10□□□□□ -0.81
YBX3-204ENST00000366290 C7orf69Q9H7B7 122 aa10□□□□□ -0.81
YBX3-204ENST00000366290 SNTG2Q9NY99 539 aa10□□□□□ -0.81
YBX3-204ENST00000366290 MIS18AQ9NYP9 233 aa10□□□□□ -0.81
YBX3-204ENST00000366290 SUCOQ9UBS9 1254 aaKnown RBP10□□□□□ -0.81
YBX3-204ENST00000366290 RRP7AQ9Y3A4 280 aaKnown RBP10□□□□□ -0.81
YBX3-204ENST00000366290 N4BP2Q86UW6 1770 aaPredicted RBP10□□□□□ -0.81
YBX3-204ENST00000366290 A0A0G2JLW4 131 aa9.99□□□□□ -0.81
YBX3-204ENST00000366290 HMX2A2RU54 273 aa9.99□□□□□ -0.81
YBX3-204ENST00000366290 PRAMEF22A3QJZ6 481 aa9.99□□□□□ -0.81
YBX3-204ENST00000366290 CLEC3AO75596 197 aa9.99□□□□□ -0.81
YBX3-204ENST00000366290 PMS1P54277 932 aaKnown RBP9.99□□□□□ -0.81
YBX3-204ENST00000366290 NFIXQ14938 502 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms