RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 COPB1P53618 953 aaKnown RBP20.33■□□□□ 0.85
CLIP2-202ENST00000361545 ADAT2Q7Z6V5 191 aaKnown RBP20.33■□□□□ 0.85
CLIP2-202ENST00000361545 ANKRD13CQ8N6S4 541 aa20.33■□□□□ 0.85
CLIP2-202ENST00000361545 RNF17Q9BXT8 1623 aaKnown RBP20.33■□□□□ 0.85
CLIP2-202ENST00000361545 XPOTO43592 962 aaKnown RBP20.33■□□□□ 0.84
CLIP2-202ENST00000361545 NMT2O60551 498 aa20.33■□□□□ 0.84
CLIP2-202ENST00000361545 TBC1D8O95759 1140 aa20.33■□□□□ 0.84
CLIP2-202ENST00000361545 TFAMQ00059 246 aaKnown RBP20.33■□□□□ 0.84
CLIP2-202ENST00000361545 CTTNQ14247 550 aaKnown RBP20.33■□□□□ 0.84
CLIP2-202ENST00000361545 VPS37BQ9H9H4 285 aa20.33■□□□□ 0.84
CLIP2-202ENST00000361545 ZNF215Q9UL58 517 aaPredicted RBP20.33■□□□□ 0.84
CLIP2-202ENST00000361545 ABCC12Q96J65 1359 aa20.33■□□□□ 0.84
CLIP2-202ENST00000361545 FAM186BQ8IYM0 893 aa20.33■□□□□ 0.84
CLIP2-202ENST00000361545 MAIP1Q8WWC4 291 aa20.33■□□□□ 0.84
CLIP2-202ENST00000361545 PRKAG2Q9UGJ0 569 aa20.33■□□□□ 0.84
CLIP2-202ENST00000361545 PTCH1Q13635 1447 aa20.33■□□□□ 0.84
CLIP2-202ENST00000361545 PSAPP07602 524 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 PTK2Q05397 1052 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 ANKRD36BP1Q96IX9 119 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 TULP4Q9NRJ4 1543 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 ZSCAN20P17040 1043 aaPredicted RBP20.32■□□□□ 0.84
CLIP2-202ENST00000361545 PSMC2P35998 433 aaKnown RBP20.32■□□□□ 0.84
CLIP2-202ENST00000361545 ITKQ08881 620 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 GSDMBQ8TAX9 411 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 RAVER2Q9HCJ3 691 aaKnown RBP20.32■□□□□ 0.84
CLIP2-202ENST00000361545 SAR1BQ9Y6B6 198 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 EBAG9O00559 213 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 POLR2BP30876 1174 aaKnown RBP20.32■□□□□ 0.84
CLIP2-202ENST00000361545 ELF2Q15723 593 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 TAB3Q8N5C8 712 aaPredicted RBP20.32■□□□□ 0.84
CLIP2-202ENST00000361545 LINC00301Q8NCQ3 95 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 TMEM47Q9BQJ4 181 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 H2AFZP0C0S5 128 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 H2AFVQ71UI9 128 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 SEPT10Q9P0V9 454 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 NEDD4P46934 1319 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 GIPC1O14908 333 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 SRGAP2CP0DJJ0 459 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 SLC17A8Q8NDX2 589 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 TRIM58Q8NG06 486 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 PFDN4Q9NQP4 134 aa20.32■□□□□ 0.84
CLIP2-202ENST00000361545 OATP04181 439 aa20.31■□□□□ 0.84
CLIP2-202ENST00000361545 GDAP1L1Q96MZ0 367 aa20.31■□□□□ 0.84
CLIP2-202ENST00000361545 FAM184BQ9ULE4 1060 aa20.31■□□□□ 0.84
CLIP2-202ENST00000361545 MFAP3P55082 362 aa20.31■□□□□ 0.84
CLIP2-202ENST00000361545 STAG1Q8WVM7 1258 aa20.31■□□□□ 0.84
CLIP2-202ENST00000361545 KRT15P19012 456 aa20.31■□□□□ 0.84
CLIP2-202ENST00000361545 MAN1A1P33908 653 aa20.31■□□□□ 0.84
CLIP2-202ENST00000361545 P2RX5Q93086 422 aa20.31■□□□□ 0.84
CLIP2-202ENST00000361545 FAM49AQ9H0Q0 323 aaPredicted RBP20.31■□□□□ 0.84
CLIP2-202ENST00000361545 DCP1AQ9NPI6 582 aaPredicted RBP20.31■□□□□ 0.84
CLIP2-202ENST00000361545 CTAGE3PQ8IX95 158 aa20.31■□□□□ 0.84
CLIP2-202ENST00000361545 NME8Q8N427 588 aa20.31■□□□□ 0.84
CLIP2-202ENST00000361545 CCDC110Q8TBZ0 833 aa20.31■□□□□ 0.84
CLIP2-202ENST00000361545 PLCG1P19174 1290 aa20.3■□□□□ 0.84
CLIP2-202ENST00000361545 PAK2Q13177 524 aa20.3■□□□□ 0.84
CLIP2-202ENST00000361545 PTPN21Q16825 1174 aa20.3■□□□□ 0.84
CLIP2-202ENST00000361545 C1orf167Q5SNV9 1468 aa20.3■□□□□ 0.84
CLIP2-202ENST00000361545 SPP2Q13103 211 aa20.3■□□□□ 0.84
CLIP2-202ENST00000361545 ADGRB3O60242 1522 aa20.3■□□□□ 0.84
CLIP2-202ENST00000361545 RNF8O76064 485 aa20.3■□□□□ 0.84
CLIP2-202ENST00000361545 PLA2G4BP0C869 781 aa20.3■□□□□ 0.84
CLIP2-202ENST00000361545 NLRP4Q96MN2 994 aa20.3■□□□□ 0.84
CLIP2-202ENST00000361545 MIS12Q9H081 205 aa20.3■□□□□ 0.84
CLIP2-202ENST00000361545 GJB4Q9NTQ9 266 aa20.3■□□□□ 0.84
CLIP2-202ENST00000361545 STK17AQ9UEE5 414 aa20.3■□□□□ 0.84
CLIP2-202ENST00000361545 RPAP1Q9BWH6 1393 aaPredicted RBP20.3■□□□□ 0.84
CLIP2-202ENST00000361545 MROH7-TTC4A0A0A0MT08 1334 aa20.3■□□□□ 0.84
CLIP2-202ENST00000361545 SLFN14P0C7P3 912 aa20.3■□□□□ 0.84
CLIP2-202ENST00000361545 ARPP19P56211 112 aa20.3■□□□□ 0.84
CLIP2-202ENST00000361545 NXF1Q9UBU9 619 aaKnown RBP20.3■□□□□ 0.84
CLIP2-202ENST00000361545 FEZ2Q9UHY8 353 aaPredicted RBP20.3■□□□□ 0.84
CLIP2-202ENST00000361545 A0A0G2JLW4 131 aa20.29■□□□□ 0.84
CLIP2-202ENST00000361545 KRIT1O00522 736 aa20.29■□□□□ 0.84
CLIP2-202ENST00000361545 HGSO14964 777 aaPredicted RBP20.29■□□□□ 0.84
CLIP2-202ENST00000361545 LRRN2O75325 713 aa20.29■□□□□ 0.84
CLIP2-202ENST00000361545 DPCR1Q3MIW9 517 aa20.29■□□□□ 0.84
CLIP2-202ENST00000361545 KAZNQ674X7 775 aa20.29■□□□□ 0.84
CLIP2-202ENST00000361545 DCAF4Q8WV16 495 aa20.29■□□□□ 0.84
CLIP2-202ENST00000361545 EPSTI1Q96J88 318 aa20.29■□□□□ 0.84
CLIP2-202ENST00000361545 RSRC2Q7L4I2 434 aaKnown RBP20.29■□□□□ 0.84
CLIP2-202ENST00000361545 EXOC8Q8IYI6 725 aa20.29■□□□□ 0.84
CLIP2-202ENST00000361545 FAM149B1Q96BN6 582 aa20.29■□□□□ 0.84
CLIP2-202ENST00000361545 CEP95Q96GE4 821 aa20.29■□□□□ 0.84
CLIP2-202ENST00000361545 DDIT3P35638 169 aa20.29■□□□□ 0.84
CLIP2-202ENST00000361545 SNRNP48Q6IEG0 339 aaKnown RBP20.29■□□□□ 0.84
CLIP2-202ENST00000361545 TMTC3Q6ZXV5 915 aa20.29■□□□□ 0.84
CLIP2-202ENST00000361545 DHTKD1Q96HY7 919 aaPredicted RBP20.29■□□□□ 0.84
CLIP2-202ENST00000361545 PARVGQ9HBI0 331 aa20.29■□□□□ 0.84
CLIP2-202ENST00000361545 DDX41Q9UJV9 622 aaKnown RBP20.29■□□□□ 0.84
CLIP2-202ENST00000361545 UTYO14607 1347 aa20.29■□□□□ 0.84
CLIP2-202ENST00000361545 THAP12O43422 761 aa20.28■□□□□ 0.84
CLIP2-202ENST00000361545 SLC12A2P55011 1212 aa20.28■□□□□ 0.84
CLIP2-202ENST00000361545 INTS8Q75QN2 995 aaKnown RBP20.28■□□□□ 0.84
CLIP2-202ENST00000361545 RMDN3Q96TC7 470 aa20.28■□□□□ 0.84
CLIP2-202ENST00000361545 CASP14P31944 242 aa20.28■□□□□ 0.84
CLIP2-202ENST00000361545 KIAA1841Q6NSI8 718 aa20.28■□□□□ 0.84
CLIP2-202ENST00000361545 HOXC10Q9NYD6 342 aa20.28■□□□□ 0.84
CLIP2-202ENST00000361545 VPS72Q15906 364 aa20.28■□□□□ 0.84
CLIP2-202ENST00000361545 LGSNQ5TDP6 509 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms