RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 CDK8P49336 464 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 TMEM67Q5HYA8 995 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 AKNAD1Q5T1N1 836 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 NCAPG2Q86XI2 1143 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 NAPBQ9H115 298 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 CNNM2Q9H8M5 875 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 ARMT1Q9H993 441 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 THRAP3Q9Y2W1 955 aaKnown RBP8.37□□□□□ -1.07
CLCN3-202ENST00000360642 SPATA31A1Q5TZJ5 1347 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 ROBO1Q9Y6N7 1651 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 CHD4Q14839 1912 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 MROH7-TTC4A0A0A0MT08 1334 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 TTC24A2A3L6 582 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-202ENST00000360642 SOBPA7XYQ1 873 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 NEMFO60524 1076 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 AMPD3Q01432 767 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 SFSWAPQ12872 951 aaKnown RBP8.37□□□□□ -1.07
CLCN3-202ENST00000360642 CAMK2GQ13555 558 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-202ENST00000360642 ITPK1Q13572 414 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 DPCR1Q3MIW9 517 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 CCDC152Q4G0S7 254 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 CPLX2Q6PUV4 134 aaKnown RBP8.37□□□□□ -1.07
CLCN3-202ENST00000360642 MICU3Q86XE3 530 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 AOPEPQ8N6M6 819 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 MTA3Q9BTC8 594 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 KRT23Q9C075 422 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 PKD2L1Q9P0L9 805 aa8.37□□□□□ -1.07
CLCN3-202ENST00000360642 NRAPQ86VF7 1730 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 LOC102724428A0A0B4J2F2 783 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 FAM177BA6PVY3 158 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 XRCC5P13010 732 aaKnown RBP8.36□□□□□ -1.07
CLCN3-202ENST00000360642 GNAT2P19087 354 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 TFE3P19532 575 aaPredicted RBP8.36□□□□□ -1.07
CLCN3-202ENST00000360642 GSTT1P30711 240 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 PDE6BP35913 854 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 IARSP41252 1262 aaKnown RBP8.36□□□□□ -1.07
CLCN3-202ENST00000360642 SIK1P57059 783 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 SNAP47Q5SQN1 464 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 NBPF11Q86T75 865 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 PHC3Q8NDX5 983 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 RASGRP4Q8TDF6 673 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 SHDQ96IW2 340 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 MYH14Q7Z406 1995 aaKnown RBP8.36□□□□□ -1.07
CLCN3-202ENST00000360642 COL4A1P02462 1669 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 GOLGA8AA7E2F4 631 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 J3QW42 95 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 PPP1R12AO14974 1030 aaPredicted RBP8.36□□□□□ -1.07
CLCN3-202ENST00000360642 CTIFO43310 598 aaKnown RBP8.36□□□□□ -1.07
CLCN3-202ENST00000360642 PRKAB2O43741 272 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 SLC3A2P08195 630 aaKnown RBP8.36□□□□□ -1.07
CLCN3-202ENST00000360642 IFNAR1P17181 557 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 GTF2E1P29083 439 aaPredicted RBP8.36□□□□□ -1.07
CLCN3-202ENST00000360642 NLRP12P59046 1061 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 FAAP100Q0VG06 881 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 SHC4Q6S5L8 630 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 LINC00528Q8N1L1 170 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 LCORLQ8N3X6 602 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 ARMC5Q96C12 935 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 RHOVQ96L33 236 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 TUBE1Q9UJT0 475 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 PPME1Q9Y570 386 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 SLC12A7Q9Y666 1083 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 KAT6BQ8WYB5 2073 aa8.36□□□□□ -1.07
CLCN3-202ENST00000360642 UBE2Q2LH0YL09 131 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 IFIT3O14879 490 aaKnown RBP8.35□□□□□ -1.07
CLCN3-202ENST00000360642 BMP2P12643 396 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 MARCKSP29966 332 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-202ENST00000360642 CHRNDQ07001 517 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 NCAPHQ15003 741 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 DDB1Q16531 1140 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 NFXL1Q6ZNB6 911 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 MFSD6Q6ZSS7 791 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 PGBD3Q8N328 593 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 MARCH10Q8NA82 808 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-202ENST00000360642 MYL10Q9BUA6 226 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 KCND1Q9NSA2 647 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 ANKIB1Q9P2G1 1089 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 ZNF804BA4D1E1 1349 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 IGHMBP2P38935 993 aaKnown RBP8.35□□□□□ -1.07
CLCN3-202ENST00000360642 CCZ1BP86790 482 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 CCZ1P86791 482 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-202ENST00000360642 SPRYD7Q5W111 196 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 RESP18Q5W5W9 173 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 RELL1Q8IUW5 271 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 MEIOBQ8N635 442 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 ZC3H12CQ9C0D7 883 aaKnown RBP8.35□□□□□ -1.07
CLCN3-202ENST00000360642 OSBPL5Q9H0X9 879 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-202ENST00000360642 GJA3Q9Y6H8 435 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 CCDC69A6NI79 296 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 ST13P50502 369 aaKnown RBP8.35□□□□□ -1.07
CLCN3-202ENST00000360642 RCAN1P53805 252 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 SSRP1Q08945 709 aaKnown RBP8.35□□□□□ -1.07
CLCN3-202ENST00000360642 CHAF1AQ13111 956 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-202ENST00000360642 SQSTM1Q13501 440 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 JAMLQ86YT9 394 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 GALNT12Q8IXK2 581 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 JMYQ8N9B5 988 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 NACAP1Q9BZK3 213 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 SUV39H2Q9H5I1 410 aa8.35□□□□□ -1.07
CLCN3-202ENST00000360642 NIP7Q9Y221 180 aaKnown RBP eCLIP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms