RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 CALCOCO2Q13137 446 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 ADAM9Q13443 819 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 SYCE1Q8N0S2 351 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 PANK4Q9NVE7 773 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 EHD2Q9NZN4 543 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 AMFRQ9UKV5 643 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 PACSIN2Q9UNF0 486 aaPredicted RBP13.16□□□□□ -0.3
EPHB4-202ENST00000360620 COL4A3BPQ9Y5P4 624 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 FAM208AQ9UK61 1670 aaKnown RBP13.16□□□□□ -0.3
EPHB4-202ENST00000360620 LOC102724159A0A0B4J2E5 919 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 CHUKO15111 745 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 RGS16O15492 202 aaPredicted RBP13.16□□□□□ -0.3
EPHB4-202ENST00000360620 STK4Q13043 487 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 NEDD9Q14511 834 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 PWP2Q15269 919 aaKnown RBP13.16□□□□□ -0.3
EPHB4-202ENST00000360620 PAPD7Q5XG87 772 aaKnown RBP13.16□□□□□ -0.3
EPHB4-202ENST00000360620 DENND2CQ68D51 928 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 STXBP4Q6ZWJ1 553 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 GPBP1Q86WP2 473 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 DYNLL2Q96FJ2 89 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 MS4A14Q96JA4 679 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 AP1M1Q9BXS5 423 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 NBPF3Q9H094 633 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 RAB17Q9H0T7 212 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 CPVLQ9H3G5 476 aa13.16□□□□□ -0.3
EPHB4-202ENST00000360620 PDS5AQ29RF7 1337 aaKnown RBP13.15□□□□□ -0.3
EPHB4-202ENST00000360620 LMTK3Q96Q04 1460 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 MEFVO15553 781 aaPredicted RBP13.15□□□□□ -0.3
EPHB4-202ENST00000360620 CLTAP09496 248 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 XRCC5P13010 732 aaKnown RBP13.15□□□□□ -0.3
EPHB4-202ENST00000360620 HERVK_113P62684 666 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 EZH2Q15910 746 aaKnown RBP13.15□□□□□ -0.3
EPHB4-202ENST00000360620 TRIM9Q9C026 710 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 PCDHA12Q9UN75 941 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 PCDHB13Q9Y5F0 798 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 PLEKHG2Q9H7P9 1386 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 USP17L3A6NCW0 530 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 USP17L4A6NCW7 530 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 F8W031 263 aaPredicted RBP13.15□□□□□ -0.3
EPHB4-202ENST00000360620 PGRMC1O00264 195 aaKnown RBP13.15□□□□□ -0.3
EPHB4-202ENST00000360620 PPP1R37O75864 691 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 SERPING1P05155 500 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 PLEKP08567 350 aaPredicted RBP13.15□□□□□ -0.3
EPHB4-202ENST00000360620 SLC1A4P43007 532 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 RPS8P62241 208 aaKnown RBP13.15□□□□□ -0.3
EPHB4-202ENST00000360620 USP17L1Q7RTZ2 530 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 TMC4Q7Z404 712 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 TBC1D31Q96DN5 1066 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 DNAJC7Q99615 494 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 SH2D4AQ9H788 454 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 RIC8AQ9NPQ8 531 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 ATP8A1Q9Y2Q0 1164 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 ARHGAP23Q9P227 1491 aa13.15□□□□□ -0.3
EPHB4-202ENST00000360620 A0A1W2PRG0 241 aa13.15□□□□□ -0.31
EPHB4-202ENST00000360620 CTNND1O60716 968 aaKnown RBP13.15□□□□□ -0.31
EPHB4-202ENST00000360620 FAM13AO94988 1023 aa13.15□□□□□ -0.31
EPHB4-202ENST00000360620 TNFAIP3P21580 790 aa13.15□□□□□ -0.31
EPHB4-202ENST00000360620 LRRC63Q05C16 580 aa13.15□□□□□ -0.31
EPHB4-202ENST00000360620 DHX9Q08211 1270 aaKnown RBP13.15□□□□□ -0.31
EPHB4-202ENST00000360620 PLVAPQ9BX97 442 aa13.15□□□□□ -0.31
EPHB4-202ENST00000360620 VEZTQ9HBM0 779 aa13.15□□□□□ -0.31
EPHB4-202ENST00000360620 RBM12Q9NTZ6 932 aaKnown RBP13.15□□□□□ -0.31
EPHB4-202ENST00000360620 STK17AQ9UEE5 414 aa13.15□□□□□ -0.31
EPHB4-202ENST00000360620 CAPN6Q9Y6Q1 641 aa13.15□□□□□ -0.31
EPHB4-202ENST00000360620 RHOBTB3O94955 611 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 CACNB1Q02641 598 aaPredicted RBP13.14□□□□□ -0.31
EPHB4-202ENST00000360620 CUL5Q93034 780 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 ZIM3Q96PE6 472 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 XRN1Q8IZH2 1706 aaKnown RBP13.14□□□□□ -0.31
EPHB4-202ENST00000360620 RGPD1P0DJD0 1748 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 FRMD3A2A2Y4 597 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 RPSAP08865 295 aaKnown RBP13.14□□□□□ -0.31
EPHB4-202ENST00000360620 IFNAR2P48551 515 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 GRIPAP1Q4V328 841 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 ZNF804AQ7Z570 1209 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 NLRP14Q86W24 1093 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 RNF10Q8N5U6 811 aaKnown RBP13.14□□□□□ -0.31
EPHB4-202ENST00000360620 RPGRQ92834 1020 aaKnown RBP13.14□□□□□ -0.31
EPHB4-202ENST00000360620 ARL8AQ96BM9 186 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 NT5C3AQ9H0P0 336 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 NALCNQ8IZF0 1738 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 ERVV-1B6SEH8 477 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 PLCG2P16885 1265 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 STAT1P42224 750 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 CARSP49589 748 aaKnown RBP13.14□□□□□ -0.31
EPHB4-202ENST00000360620 TROAPQ12815 778 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 MMGT1Q8N4V1 131 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 GIMAP8Q8ND71 665 aaPredicted RBP13.14□□□□□ -0.31
EPHB4-202ENST00000360620 WDR66Q8TBY9 1149 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 MGARPQ8TDB4 240 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 TCP11Q8WWU5 503 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 ATP6V1G3Q96LB4 118 aa13.14□□□□□ -0.31
EPHB4-202ENST00000360620 CTDP1Q9Y5B0 961 aaPredicted RBP13.14□□□□□ -0.31
EPHB4-202ENST00000360620 FRMPD2Q68DX3 1309 aaPredicted RBP13.13□□□□□ -0.31
EPHB4-202ENST00000360620 LSP1P33241 339 aa13.13□□□□□ -0.31
EPHB4-202ENST00000360620 LACTBP83111 547 aaPredicted RBP13.13□□□□□ -0.31
EPHB4-202ENST00000360620 MECOMQ03112 1051 aa13.13□□□□□ -0.31
EPHB4-202ENST00000360620 ACTN3Q08043 901 aaPredicted RBP13.13□□□□□ -0.31
EPHB4-202ENST00000360620 SEL1L2Q5TEA6 688 aa13.13□□□□□ -0.31
EPHB4-202ENST00000360620 HAUS3Q68CZ6 603 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms