RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 NT5C3AQ9H0P0 336 aa29.35■■■□□ 2.29
CUEDC1-201ENST00000360238 PUF60Q9UHX1 559 aaKnown RBP29.35■■■□□ 2.29
CUEDC1-201ENST00000360238 EIF3CLB5ME19 914 aaKnown RBP29.35■■■□□ 2.29
CUEDC1-201ENST00000360238 VWA3BQ502W6 1294 aa29.35■■■□□ 2.29
CUEDC1-201ENST00000360238 PCMTD1Q96MG8 357 aaPredicted RBP29.35■■■□□ 2.29
CUEDC1-201ENST00000360238 EIF3CQ99613 913 aaKnown RBP29.35■■■□□ 2.29
CUEDC1-201ENST00000360238 IDI2Q9BXS1 227 aa29.35■■■□□ 2.29
CUEDC1-201ENST00000360238 KANSL2Q9H9L4 492 aa29.35■■■□□ 2.29
CUEDC1-201ENST00000360238 GUCA1BQ9UMX6 200 aa29.35■■■□□ 2.29
CUEDC1-201ENST00000360238 SEC31AO94979 1220 aaKnown RBP29.34■■■□□ 2.29
CUEDC1-201ENST00000360238 MAN2A1Q16706 1144 aa29.34■■■□□ 2.29
CUEDC1-201ENST00000360238 ZFPM1Q8IX07 1006 aa29.34■■■□□ 2.29
CUEDC1-201ENST00000360238 MSANTD4Q8NCY6 345 aa29.34■■■□□ 2.29
CUEDC1-201ENST00000360238 PCDHA12Q9UN75 941 aa29.34■■■□□ 2.29
CUEDC1-201ENST00000360238 NPM3O75607 178 aaKnown RBP29.33■■■□□ 2.29
CUEDC1-201ENST00000360238 IDEP14735 1019 aa29.33■■■□□ 2.29
CUEDC1-201ENST00000360238 PLA2G4AP47712 749 aa29.33■■■□□ 2.29
CUEDC1-201ENST00000360238 QRICH1Q2TAL8 776 aa29.33■■■□□ 2.29
CUEDC1-201ENST00000360238 STRIP1Q5VSL9 837 aa29.33■■■□□ 2.29
CUEDC1-201ENST00000360238 FLAD1Q8NFF5 587 aa29.33■■■□□ 2.29
CUEDC1-201ENST00000360238 ZSWIM4Q9H7M6 989 aa29.33■■■□□ 2.29
CUEDC1-201ENST00000360238 NHEJ1Q9H9Q4 299 aaPredicted RBP29.33■■■□□ 2.29
CUEDC1-201ENST00000360238 DBNDD1Q9H9R9 158 aa29.33■■■□□ 2.29
CUEDC1-201ENST00000360238 PI4KBQ9UBF8 816 aa29.33■■■□□ 2.29
CUEDC1-201ENST00000360238 PRDM4Q9UKN5 801 aa29.33■■■□□ 2.29
CUEDC1-201ENST00000360238 MARCH6O60337 910 aa29.33■■■□□ 2.29
CUEDC1-201ENST00000360238 IPO7O95373 1038 aaKnown RBP29.33■■■□□ 2.29
CUEDC1-201ENST00000360238 TBC1D8O95759 1140 aa29.33■■■□□ 2.29
CUEDC1-201ENST00000360238 NDST4Q9H3R1 872 aa29.33■■■□□ 2.29
CUEDC1-201ENST00000360238 MYO6Q9UM54 1294 aa29.33■■■□□ 2.29
CUEDC1-201ENST00000360238 MMP10P09238 476 aa29.32■■■□□ 2.28
CUEDC1-201ENST00000360238 EEF2P13639 858 aaKnown RBP29.32■■■□□ 2.28
CUEDC1-201ENST00000360238 HNRNPH3P31942 346 aaKnown RBP29.32■■■□□ 2.28
CUEDC1-201ENST00000360238 SLC1A4P43007 532 aa29.32■■■□□ 2.28
CUEDC1-201ENST00000360238 USP11P51784 963 aa29.32■■■□□ 2.28
CUEDC1-201ENST00000360238 FAM193AP78312 1265 aa29.32■■■□□ 2.28
CUEDC1-201ENST00000360238 CERKLQ49MI3 558 aaPredicted RBP29.32■■■□□ 2.28
CUEDC1-201ENST00000360238 CCDC122Q5T0U0 273 aa29.32■■■□□ 2.28
CUEDC1-201ENST00000360238 LRRC55Q6ZSA7 311 aa29.32■■■□□ 2.28
CUEDC1-201ENST00000360238 TSG101Q99816 390 aa29.32■■■□□ 2.28
CUEDC1-201ENST00000360238 TRIM10Q9UDY6 481 aa29.32■■■□□ 2.28
CUEDC1-201ENST00000360238 SIK3Q9Y2K2 1263 aa29.32■■■□□ 2.28
CUEDC1-201ENST00000360238 KRT86O43790 486 aa29.32■■■□□ 2.28
CUEDC1-201ENST00000360238 ECM1Q16610 540 aa29.32■■■□□ 2.28
CUEDC1-201ENST00000360238 KIAA1328Q86T90 577 aa29.32■■■□□ 2.28
CUEDC1-201ENST00000360238 DNAJC19Q96DA6 116 aa29.32■■■□□ 2.28
CUEDC1-201ENST00000360238 ANKZF1Q9H8Y5 726 aa29.32■■■□□ 2.28
CUEDC1-201ENST00000360238 CTAGE15A4D2H0 777 aa29.31■■■□□ 2.28
CUEDC1-201ENST00000360238 CTAGE8P0CG41 777 aa29.31■■■□□ 2.28
CUEDC1-201ENST00000360238 TERF2Q15554 542 aa29.31■■■□□ 2.28
CUEDC1-201ENST00000360238 MOXD1Q6UVY6 613 aa29.31■■■□□ 2.28
CUEDC1-201ENST00000360238 CTAGE6Q86UF2 777 aa29.31■■■□□ 2.28
CUEDC1-201ENST00000360238 CCDC84Q86UT8 332 aaPredicted RBP29.31■■■□□ 2.28
CUEDC1-201ENST00000360238 CTAGE4Q8IX94 777 aa29.31■■■□□ 2.28
CUEDC1-201ENST00000360238 RAB21Q9UL25 225 aa29.31■■■□□ 2.28
CUEDC1-201ENST00000360238 COASYQ13057 564 aa29.3■■■□□ 2.28
CUEDC1-201ENST00000360238 CDC37Q16543 378 aaPredicted RBP29.3■■■□□ 2.28
CUEDC1-201ENST00000360238 SLFN13Q68D06 897 aa29.3■■■□□ 2.28
CUEDC1-201ENST00000360238 KIAA0825Q8IV33 1275 aa29.3■■■□□ 2.28
CUEDC1-201ENST00000360238 JAKMIP2Q96AA8 810 aa29.3■■■□□ 2.28
CUEDC1-201ENST00000360238 MBOAT7Q96N66 472 aa29.3■■■□□ 2.28
CUEDC1-201ENST00000360238 KCNMB3Q9NPA1 279 aa29.3■■■□□ 2.28
CUEDC1-201ENST00000360238 FAM198AQ9UFP1 575 aa29.3■■■□□ 2.28
CUEDC1-201ENST00000360238 PCDHA1Q9Y5I3 950 aa29.3■■■□□ 2.28
CUEDC1-201ENST00000360238 CYP3A7-CYP3A51PA0A087WV96 503 aa29.3■■■□□ 2.28
CUEDC1-201ENST00000360238 DDTLA6NHG4 134 aaPredicted RBP29.3■■■□□ 2.28
CUEDC1-201ENST00000360238 CYP3A7P24462 503 aa29.3■■■□□ 2.28
CUEDC1-201ENST00000360238 AP3B2Q13367 1082 aa29.3■■■□□ 2.28
CUEDC1-201ENST00000360238 DACT2Q5SW24 774 aa29.3■■■□□ 2.28
CUEDC1-201ENST00000360238 TATDN1Q6P1N9 297 aa29.3■■■□□ 2.28
CUEDC1-201ENST00000360238 TRAPPC11Q7Z392 1133 aa29.3■■■□□ 2.28
CUEDC1-201ENST00000360238 HNRNPLLQ8WVV9 542 aaKnown RBP29.3■■■□□ 2.28
CUEDC1-201ENST00000360238 PLSCR1O15162 318 aa29.29■■■□□ 2.28
CUEDC1-201ENST00000360238 NKRFO15226 690 aaKnown RBP eCLIP29.29■■■□□ 2.28
CUEDC1-201ENST00000360238 MCTP2Q6DN12 878 aa29.29■■■□□ 2.28
CUEDC1-201ENST00000360238 MYOCDQ8IZQ8 938 aa29.29■■■□□ 2.28
CUEDC1-201ENST00000360238 ANO3Q9BYT9 981 aa29.29■■■□□ 2.28
CUEDC1-201ENST00000360238 BMP2KQ9NSY1 1161 aaPredicted RBP29.29■■■□□ 2.28
CUEDC1-201ENST00000360238 PLAGL2Q9UPG8 496 aa29.29■■■□□ 2.28
CUEDC1-201ENST00000360238 SLURP2P0DP57 97 aa29.29■■■□□ 2.28
CUEDC1-201ENST00000360238 TCP10Q12799 353 aa29.29■■■□□ 2.28
CUEDC1-201ENST00000360238 TRIM34Q9BYJ4 488 aa29.29■■■□□ 2.28
CUEDC1-201ENST00000360238 KCNQ5Q9NR82 932 aa29.29■■■□□ 2.28
CUEDC1-201ENST00000360238 TMEM179Q6ZVK1 233 aa29.28■■■□□ 2.28
CUEDC1-201ENST00000360238 USP17L15C9J2P7 530 aa29.28■■■□□ 2.28
CUEDC1-201ENST00000360238 USP17L13C9JLJ4 530 aa29.28■■■□□ 2.28
CUEDC1-201ENST00000360238 USP17L11C9JVI0 530 aa29.28■■■□□ 2.28
CUEDC1-201ENST00000360238 USP17L18D6R9N7 530 aa29.28■■■□□ 2.28
CUEDC1-201ENST00000360238 USP17L22D6RA61 530 aa29.28■■■□□ 2.28
CUEDC1-201ENST00000360238 USP17L17D6RBQ6 530 aa29.28■■■□□ 2.28
CUEDC1-201ENST00000360238 USP17L19D6RCP7 530 aa29.28■■■□□ 2.28
CUEDC1-201ENST00000360238 USP17L20D6RJB6 530 aa29.28■■■□□ 2.28
CUEDC1-201ENST00000360238 SASH3O75995 380 aa29.28■■■□□ 2.28
CUEDC1-201ENST00000360238 CACNB3P54284 484 aa29.28■■■□□ 2.28
CUEDC1-201ENST00000360238 USP17L24Q0WX57 530 aa29.28■■■□□ 2.28
CUEDC1-201ENST00000360238 ZCWPW2Q504Y3 356 aa29.28■■■□□ 2.28
CUEDC1-201ENST00000360238 USP17L6PQ6QN14 398 aa29.28■■■□□ 2.28
CUEDC1-201ENST00000360238 ZNF622Q969S3 477 aaKnown RBP eCLIP29.28■■■□□ 2.28
CUEDC1-201ENST00000360238 UBXN6Q9BZV1 441 aa29.28■■■□□ 2.28
CUEDC1-201ENST00000360238 SLX4Q8IY92 1834 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms