RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 SF3B2Q13435 895 aaKnown RBP13.5□□□□□ -0.25
COL20A1-201ENST00000358894 KRT26Q7Z3Y9 468 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 FNBP4Q8N3X1 1017 aaPredicted RBP13.5□□□□□ -0.25
COL20A1-201ENST00000358894 KANSL2Q9H9L4 492 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 PPP1R3GB7ZBB8 358 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 LRCH2Q5VUJ6 765 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 RPAINQ86UA6 219 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 L2HGDHQ9H9P8 463 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 ARHGEF10LQ9HCE6 1279 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 TFR2Q9UP52 801 aa13.5□□□□□ -0.25
COL20A1-201ENST00000358894 FLOT1O75955 427 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 NEFHP12036 1026 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 TNFAIP3P21580 790 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 MAP3K9P80192 1104 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 PEX26Q7Z412 305 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 FAM204AQ9H8W3 233 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 TRIM66O15016 1216 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 STK4Q13043 487 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 ANKRD40Q6AI12 368 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 U2AF1L4Q8WU68 220 aaKnown RBP13.49□□□□□ -0.25
COL20A1-201ENST00000358894 IQCDQ96DY2 449 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 TRIM9Q9C026 710 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 NUCKS1Q9H1E3 243 aaKnown RBP13.49□□□□□ -0.25
COL20A1-201ENST00000358894 CAMTA1Q9Y6Y1 1673 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 NEBLO76041 1014 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 FTCDO95954 541 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 EZRP15311 586 aaKnown RBP13.49□□□□□ -0.25
COL20A1-201ENST00000358894 BMP6P22004 513 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 GJC1P36383 396 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 SLC7A5Q01650 507 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 ADSSL1Q8N142 457 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 AGPAT5Q9NUQ2 364 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 LIMA1Q9UHB6 759 aaKnown RBP13.49□□□□□ -0.25
COL20A1-201ENST00000358894 COL4A3BPQ9Y5P4 624 aa13.49□□□□□ -0.25
COL20A1-201ENST00000358894 BCL9O00512 1426 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 A0A087X0B3 334 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 GAS7O60861 476 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 ALDH1B1P30837 517 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 SBK1Q52WX2 424 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 CCDC170Q8IYT3 715 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 FAM133AQ8N9E0 248 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 NEDD1Q8NHV4 660 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 AMNQ9BXJ7 453 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 TCP10L2B9ZVM9 353 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 H0YIN7 160 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 GNA14O95837 355 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 POTEJP0CG39 1038 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 AKR1B1P15121 316 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 CCDC25Q86WR0 208 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 GSPT2Q8IYD1 628 aaKnown RBP13.48□□□□□ -0.25
COL20A1-201ENST00000358894 TAOK3Q9H2K8 898 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 USP17L10C9JJH3 530 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 CLIC2O15247 247 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 ADAMTS1Q9UHI8 967 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 PCDHA13Q9Y5I0 950 aa13.48□□□□□ -0.25
COL20A1-201ENST00000358894 SETD1AO15047 1707 aaKnown RBP13.48□□□□□ -0.25
COL20A1-201ENST00000358894 PNMA6FA0A0J9YX94 578 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 E9PMD0 336 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 PLA2G4BP0C869 781 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 MAP2K1Q02750 393 aaPredicted RBP13.47□□□□□ -0.25
COL20A1-201ENST00000358894 GUCY2DQ02846 1103 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 PAK2Q13177 524 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 PPP2R5AQ15172 486 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 ABCB5Q2M3G0 1257 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 WDR78Q5VTH9 848 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 TTC19Q6DKK2 380 aaPredicted RBP13.47□□□□□ -0.25
COL20A1-201ENST00000358894 UNC13DQ70J99 1090 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 ADAT2Q7Z6V5 191 aaKnown RBP13.47□□□□□ -0.25
COL20A1-201ENST00000358894 MLXIPQ9HAP2 919 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 EMILIN3Q9NT22 766 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 FEZ2Q9UHY8 353 aaPredicted RBP13.47□□□□□ -0.25
COL20A1-201ENST00000358894 TOPAZ1Q8N9V7 1692 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 CCDC169A6NNP5 214 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 RASA1P20936 1047 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 HOXA13P31271 388 aaPredicted RBP13.47□□□□□ -0.25
COL20A1-201ENST00000358894 ATP1A2P50993 1020 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 EVX2Q03828 476 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 EXOC3L4Q17RC7 722 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 RIC8AQ9NPQ8 531 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 VEGFAP15692 232 aaPredicted RBP13.47□□□□□ -0.25
COL20A1-201ENST00000358894 SLFN12Q8IYM2 578 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 NKX2-3Q8TAU0 364 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 FAM71BQ8TC56 605 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 CCDC17Q96LX7 622 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 CCSER1Q9C0I3 900 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 ADAM21Q9UKJ8 722 aa13.47□□□□□ -0.25
COL20A1-201ENST00000358894 FAM205AQ6ZU69 1335 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 LRRC53A6NM62 1247 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 PPIP5K2O43314 1243 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 RNF40O75150 1001 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 ATP1A1P05023 1023 aaKnown RBP13.46□□□□□ -0.25
COL20A1-201ENST00000358894 CETN2P41208 172 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 TBC1D10BQ4KMP7 808 aaPredicted RBP13.46□□□□□ -0.25
COL20A1-201ENST00000358894 KCTD16Q68DU8 428 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 TTBK2Q6IQ55 1244 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 DAAM2Q86T65 1068 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 TSKSQ9UJT2 592 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 RGPD1P0DJD0 1748 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 A0A1B0GUA9 196 aa13.46□□□□□ -0.25
COL20A1-201ENST00000358894 CLRN2A0PK11 232 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms