RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 OR52Z1P0C646 297 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 STX2P32856 288 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 FAM89AQ96GI7 184 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 SLC52A2Q9HAB3 445 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 ATP6V0A2Q9Y487 856 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 HOXB6P17509 224 aaKnown RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 RRAGAQ7L523 313 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 TRPM8Q7Z2W7 1104 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 ISCUQ9H1K1 167 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 CDHR2Q9BYE9 1310 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 MAGEB6P1A0A0J9YX57 407 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 KIF11P52732 1056 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 PDIA5Q14554 519 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 EXOC3L4Q17RC7 722 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 LARP6Q9BRS8 491 aaKnown RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 LRCH1Q9Y2L9 728 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 ADCK5Q3MIX3 580 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 XAGE3Q8WTP9 111 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 CCDC17Q96LX7 622 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 NDST4Q9H3R1 872 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 SUCLA2Q9P2R7 463 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 B4DLN1 442 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 RPS6KC1Q96S38 1066 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 ZMYND12Q9H0C1 365 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 C8orf4Q9NR00 106 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 ATP8A2Q9NTI2 1148 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 TNNQ9UQP3 1299 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 TSPY2A6NKD2 308 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 CDH16O75309 829 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 KIF23Q02241 960 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 TRAPPC3O43617 180 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 RANBP6O60518 1105 aaKnown RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 HOXC9P31274 260 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 YWHAEP62258 255 aaKnown RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 NEK8Q86SG6 692 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 ST13P4Q8IZP2 240 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 MICAL3Q7RTP6 2002 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 KRT31Q15323 416 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 TTC19Q6DKK2 380 aaPredicted RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 SYCP3Q8IZU3 236 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 DDI1Q8WTU0 396 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 MKNK1Q9BUB5 465 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 SPAG6O75602 509 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 C4orf22Q6V702 233 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 UBXN6Q9BZV1 441 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 BHMT2Q9H2M3 363 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 DCLRE1BQ9H816 532 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 MCM9Q9NXL9 1143 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 CTNND2Q9UQB3 1225 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 MUTP22033 750 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 HHATQ5VTY9 493 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 RGL1Q9NZL6 768 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 RGL2O15211 777 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 COBLL1Q53SF7 1204 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 PGM2Q96G03 612 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 PLA2G12BQ9BX93 195 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 PITPNM3Q9BZ71 974 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 HOMER2Q9NSB8 354 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 CROCC2H7BZ55 1655 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 DLC1Q96QB1 1528 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 TNFAIP3P21580 790 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 NBPF15Q8N660 670 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 TTC13Q8NBP0 860 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 SYNGAP1Q96PV0 1343 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 VWA3AA6NCI4 1184 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 FAM83GA6ND36 823 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 SPDYAQ5MJ70 313 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 SRRM1Q8IYB3 904 aaKnown RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 SPATA20Q8TB22 786 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 COL4A3BPQ9Y5P4 624 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 GTPBP10A4D1E9 387 aaKnown RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 MYL4P12829 197 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 ADD1P35611 737 aaKnown RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 CDR2Q01850 454 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 DGKHQ86XP1 1220 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 RHOT2Q8IXI1 618 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 CIDEBQ9UHD4 219 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 PREX2Q70Z35 1606 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 EXOC5O00471 708 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 GUCY2DQ02846 1103 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 PPP4R1Q8TF05 950 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 CATSPER2Q96P56 530 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 ERVV-1B6SEH8 477 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 CASQ2O14958 399 aaPredicted RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 WFS1O76024 890 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 HSPA9P38646 679 aaKnown RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 KRR1Q13601 381 aaKnown RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 CMPK2Q5EBM0 449 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 CCDC105Q8IYK2 499 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 RPGRQ92834 1020 aaKnown RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 TTI1O43156 1089 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 PPP2R5CQ13362 524 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 CYLC2Q14093 348 aaPredicted RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 GSTA3Q16772 222 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 LACTB2Q53H82 288 aaPredicted RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 DHX38Q92620 1227 aaKnown RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 RXFP1Q9HBX9 757 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 PAPOLBQ9NRJ5 636 aaKnown RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 RPL26P61254 145 aaKnown RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 ACTRT1Q8TDG2 376 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms