RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 TTYH3Q9C0H2 523 aa17.65■□□□□ 0.42
PHTF1-201ENST00000357783 NYAP2Q9P242 653 aa17.65■□□□□ 0.42
PHTF1-201ENST00000357783 PUF60Q9UHX1 559 aaKnown RBP17.65■□□□□ 0.42
PHTF1-201ENST00000357783 SSBP05455 408 aaKnown RBP eCLIP17.65■□□□□ 0.42
PHTF1-201ENST00000357783 ZSCAN20P17040 1043 aaPredicted RBP17.65■□□□□ 0.42
PHTF1-201ENST00000357783 AOC3Q16853 763 aa17.65■□□□□ 0.42
PHTF1-201ENST00000357783 MKL1Q969V6 931 aa17.65■□□□□ 0.42
PHTF1-201ENST00000357783 TMCO3Q6UWJ1 677 aa17.64■□□□□ 0.42
PHTF1-201ENST00000357783 SIAH1Q8IUQ4 282 aa17.64■□□□□ 0.42
PHTF1-201ENST00000357783 ANO3Q9BYT9 981 aa17.64■□□□□ 0.42
PHTF1-201ENST00000357783 CDC23Q9UJX2 597 aa17.64■□□□□ 0.42
PHTF1-201ENST00000357783 GUCA1BQ9UMX6 200 aa17.64■□□□□ 0.42
PHTF1-201ENST00000357783 TFRCP02786 760 aaKnown RBP17.64■□□□□ 0.41
PHTF1-201ENST00000357783 FKBP15Q5T1M5 1219 aa17.64■□□□□ 0.41
PHTF1-201ENST00000357783 GUF1Q8N442 669 aaKnown RBP17.64■□□□□ 0.41
PHTF1-201ENST00000357783 NAPGQ99747 312 aaPredicted RBP17.64■□□□□ 0.41
PHTF1-201ENST00000357783 NUP58Q9BVL2 599 aa17.64■□□□□ 0.41
PHTF1-201ENST00000357783 MRIQ9BWK5 157 aa17.64■□□□□ 0.41
PHTF1-201ENST00000357783 TDRD3Q9H7E2 651 aaKnown RBP17.64■□□□□ 0.41
PHTF1-201ENST00000357783 TFR2Q9UP52 801 aa17.64■□□□□ 0.41
PHTF1-201ENST00000357783 ZNF646O15015 1829 aaPredicted RBP17.64■□□□□ 0.41
PHTF1-201ENST00000357783 CHMP4BP1P59074 171 aa17.63■□□□□ 0.41
PHTF1-201ENST00000357783 GPR161Q8N6U8 529 aaKnown RBP17.63■□□□□ 0.41
PHTF1-201ENST00000357783 LRRC27Q9C0I9 530 aa17.63■□□□□ 0.41
PHTF1-201ENST00000357783 SEC31AO94979 1220 aaKnown RBP17.63■□□□□ 0.41
PHTF1-201ENST00000357783 ERCC3P19447 782 aa17.63■□□□□ 0.41
PHTF1-201ENST00000357783 HERVK_113P62684 666 aa17.63■□□□□ 0.41
PHTF1-201ENST00000357783 HDLBPQ00341 1268 aaKnown RBP17.63■□□□□ 0.41
PHTF1-201ENST00000357783 IKQ13123 557 aaPredicted RBP17.63■□□□□ 0.41
PHTF1-201ENST00000357783 STYK1Q6J9G0 422 aa17.63■□□□□ 0.41
PHTF1-201ENST00000357783 SRGAP1Q7Z6B7 1085 aa17.63■□□□□ 0.41
PHTF1-201ENST00000357783 RABGGTAQ92696 567 aa17.63■□□□□ 0.41
PHTF1-201ENST00000357783 ZNHIT6Q9NWK9 470 aaKnown RBP17.63■□□□□ 0.41
PHTF1-201ENST00000357783 FAM53CQ9NYF3 392 aa17.63■□□□□ 0.41
PHTF1-201ENST00000357783 FHOD1Q9Y613 1164 aa17.63■□□□□ 0.41
PHTF1-201ENST00000357783 FKBP1AP62942 108 aaKnown RBP17.63■□□□□ 0.41
PHTF1-201ENST00000357783 ZBED6P86452 979 aa17.63■□□□□ 0.41
PHTF1-201ENST00000357783 BMS1Q14692 1282 aaKnown RBP17.63■□□□□ 0.41
PHTF1-201ENST00000357783 MEA1Q16626 185 aa17.63■□□□□ 0.41
PHTF1-201ENST00000357783 ABCB5Q2M3G0 1257 aa17.63■□□□□ 0.41
PHTF1-201ENST00000357783 TATDN1Q6P1N9 297 aa17.63■□□□□ 0.41
PHTF1-201ENST00000357783 TMEM179Q6ZVK1 233 aa17.63■□□□□ 0.41
PHTF1-201ENST00000357783 RETREG2Q8NC44 543 aa17.63■□□□□ 0.41
PHTF1-201ENST00000357783 ERGIC2Q96RQ1 377 aa17.63■□□□□ 0.41
PHTF1-201ENST00000357783 GLT8D2Q9H1C3 349 aa17.63■□□□□ 0.41
PHTF1-201ENST00000357783 SERPINA10Q9UK55 444 aa17.63■□□□□ 0.41
PHTF1-201ENST00000357783 F5H6K3 240 aa17.62■□□□□ 0.41
PHTF1-201ENST00000357783 TAL1P17542 331 aaPredicted RBP17.62■□□□□ 0.41
PHTF1-201ENST00000357783 KLRC3Q07444 240 aa17.62■□□□□ 0.41
PHTF1-201ENST00000357783 COASYQ13057 564 aa17.62■□□□□ 0.41
PHTF1-201ENST00000357783 USH1GQ495M9 461 aa17.62■□□□□ 0.41
PHTF1-201ENST00000357783 VWA3BQ502W6 1294 aa17.62■□□□□ 0.41
PHTF1-201ENST00000357783 DNAJC19Q96DA6 116 aa17.62■□□□□ 0.41
PHTF1-201ENST00000357783 MYO1AQ9UBC5 1043 aa17.62■□□□□ 0.41
PHTF1-201ENST00000357783 KIAA1024Q9UPX6 916 aa17.62■□□□□ 0.41
PHTF1-201ENST00000357783 POTEB3A0JP26 581 aa17.62■□□□□ 0.41
PHTF1-201ENST00000357783 POTECB2RU33 542 aa17.62■□□□□ 0.41
PHTF1-201ENST00000357783 E9PMD0 336 aa17.62■□□□□ 0.41
PHTF1-201ENST00000357783 PNMA6AP0CW24 399 aaPredicted RBP17.62■□□□□ 0.41
PHTF1-201ENST00000357783 STAT3P40763 770 aa17.62■□□□□ 0.41
PHTF1-201ENST00000357783 EHHADHQ08426 723 aa17.62■□□□□ 0.41
PHTF1-201ENST00000357783 POTEBQ6S5H4 581 aa17.62■□□□□ 0.41
PHTF1-201ENST00000357783 NAP1L4Q99733 375 aaKnown RBP17.62■□□□□ 0.41
PHTF1-201ENST00000357783 PARD6BQ9BYG5 372 aa17.62■□□□□ 0.41
PHTF1-201ENST00000357783 TBC1D7Q9P0N9 293 aa17.62■□□□□ 0.41
PHTF1-201ENST00000357783 KDM3AQ9Y4C1 1321 aa17.61■□□□□ 0.41
PHTF1-201ENST00000357783 MEIS2O14770 477 aa17.61■□□□□ 0.41
PHTF1-201ENST00000357783 ZRANB2O95218 330 aaKnown RBP eCLIP17.61■□□□□ 0.41
PHTF1-201ENST00000357783 NDUFB10O96000 172 aa17.61■□□□□ 0.41
PHTF1-201ENST00000357783 JAG1P78504 1218 aa17.61■□□□□ 0.41
PHTF1-201ENST00000357783 CEP112Q8N8E3 955 aa17.61■□□□□ 0.41
PHTF1-201ENST00000357783 P2RX7Q99572 595 aaKnown RBP17.61■□□□□ 0.41
PHTF1-201ENST00000357783 NDST4Q9H3R1 872 aa17.61■□□□□ 0.41
PHTF1-201ENST00000357783 PANK4Q9NVE7 773 aa17.61■□□□□ 0.41
PHTF1-201ENST00000357783 LRRC63Q05C16 580 aa17.61■□□□□ 0.41
PHTF1-201ENST00000357783 KIAA1328Q86T90 577 aa17.61■□□□□ 0.41
PHTF1-201ENST00000357783 NT5C3AQ9H0P0 336 aa17.61■□□□□ 0.41
PHTF1-201ENST00000357783 NHEJ1Q9H9Q4 299 aaPredicted RBP17.61■□□□□ 0.41
PHTF1-201ENST00000357783 FGFR1OPO95684 399 aaKnown RBP17.6■□□□□ 0.41
PHTF1-201ENST00000357783 GH2P01242 217 aa17.6■□□□□ 0.41
PHTF1-201ENST00000357783 CYLC1P35663 651 aaPredicted RBP17.6■□□□□ 0.41
PHTF1-201ENST00000357783 CACNB1Q02641 598 aaPredicted RBP17.6■□□□□ 0.41
PHTF1-201ENST00000357783 PSMD2Q13200 908 aa17.6■□□□□ 0.41
PHTF1-201ENST00000357783 MAN2A1Q16706 1144 aa17.6■□□□□ 0.41
PHTF1-201ENST00000357783 CCDC122Q5T0U0 273 aa17.6■□□□□ 0.41
PHTF1-201ENST00000357783 LRRC55Q6ZSA7 311 aa17.6■□□□□ 0.41
PHTF1-201ENST00000357783 MYOCDQ8IZQ8 938 aa17.6■□□□□ 0.41
PHTF1-201ENST00000357783 TSG101Q99816 390 aa17.6■□□□□ 0.41
PHTF1-201ENST00000357783 AMNQ9BXJ7 453 aa17.6■□□□□ 0.41
PHTF1-201ENST00000357783 HAUS4Q9H6D7 363 aa17.6■□□□□ 0.41
PHTF1-201ENST00000357783 KCNMB3Q9NPA1 279 aa17.6■□□□□ 0.41
PHTF1-201ENST00000357783 ST7Q9NRC1 585 aa17.6■□□□□ 0.41
PHTF1-201ENST00000357783 FAM207AQ9NSI2 230 aaPredicted RBP17.6■□□□□ 0.41
PHTF1-201ENST00000357783 NPHP3-ACAD11A0A0J9YXS1 232 aa17.6■□□□□ 0.41
PHTF1-201ENST00000357783 USP11P51784 963 aa17.6■□□□□ 0.41
PHTF1-201ENST00000357783 ARHGAP4P98171 946 aa17.6■□□□□ 0.41
PHTF1-201ENST00000357783 RAD51AP2Q09MP3 1159 aa17.6■□□□□ 0.41
PHTF1-201ENST00000357783 FAM26FQ5R3K3 315 aa17.6■□□□□ 0.41
PHTF1-201ENST00000357783 FGFBP2Q9BYJ0 223 aa17.6■□□□□ 0.41
PHTF1-201ENST00000357783 EPHB6O15197 1021 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms