RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 PDE4DQ08499 809 aa10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 RBL2Q08999 1139 aa10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 ZNF543Q08ER8 600 aa10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 BFSP2Q13515 415 aa10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 MICALL1Q8N3F8 863 aa10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 CAGE1Q8TC20 777 aa10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 COPS5Q92905 334 aa10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 EVI5LQ96CN4 794 aa10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 MPHOSPH6Q99547 160 aaKnown RBP10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 CERS4Q9HA82 394 aa10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 LMCD1Q9NZU5 365 aa10.09□□□□□ -0.79
COL4A3BP-202ENST00000357457 ZMYM6O95789 1325 aa10.08□□□□□ -0.8
COL4A3BP-202ENST00000357457 FRMPD2Q68DX3 1309 aaPredicted RBP10.08□□□□□ -0.8
COL4A3BP-202ENST00000357457 ARIH2O95376 493 aa10.08□□□□□ -0.8
COL4A3BP-202ENST00000357457 PARNO95453 639 aaKnown RBP10.08□□□□□ -0.8
COL4A3BP-202ENST00000357457 HSPD1P10809 573 aaKnown RBP10.08□□□□□ -0.8
COL4A3BP-202ENST00000357457 PCP11498 1178 aaKnown RBP10.08□□□□□ -0.8
COL4A3BP-202ENST00000357457 TIE1P35590 1138 aa10.08□□□□□ -0.8
COL4A3BP-202ENST00000357457 GRB10Q13322 594 aa10.08□□□□□ -0.8
COL4A3BP-202ENST00000357457 MCMDC2Q4G0Z9 681 aa10.08□□□□□ -0.8
COL4A3BP-202ENST00000357457 FAM47CQ5HY64 1035 aa10.08□□□□□ -0.8
COL4A3BP-202ENST00000357457 KRT40Q6A162 431 aa10.08□□□□□ -0.8
COL4A3BP-202ENST00000357457 AFAP1L1Q8TED9 768 aa10.08□□□□□ -0.8
COL4A3BP-202ENST00000357457 ARNTL2Q8WYA1 636 aa10.08□□□□□ -0.8
COL4A3BP-202ENST00000357457 KAT2BQ92831 832 aa10.08□□□□□ -0.8
COL4A3BP-202ENST00000357457 HLA-CQ95604 372 aa10.08□□□□□ -0.8
COL4A3BP-202ENST00000357457 FTOQ9C0B1 505 aaKnown RBP eCLIP10.08□□□□□ -0.8
COL4A3BP-202ENST00000357457 MYH6P13533 1939 aa10.07□□□□□ -0.8
COL4A3BP-202ENST00000357457 CXCL10P02778 98 aa10.07□□□□□ -0.8
COL4A3BP-202ENST00000357457 SKIV2LQ15477 1246 aaKnown RBP10.07□□□□□ -0.8
COL4A3BP-202ENST00000357457 PTGISQ16647 500 aa10.07□□□□□ -0.8
COL4A3BP-202ENST00000357457 RRP12Q5JTH9 1297 aaKnown RBP10.07□□□□□ -0.8
COL4A3BP-202ENST00000357457 GPATCH4Q5T3I0 446 aaKnown RBP10.07□□□□□ -0.8
COL4A3BP-202ENST00000357457 PPP1R13LQ8WUF5 828 aa10.07□□□□□ -0.8
COL4A3BP-202ENST00000357457 AFG1LQ8WV93 481 aa10.07□□□□□ -0.8
COL4A3BP-202ENST00000357457 TBC1D5Q92609 795 aa10.07□□□□□ -0.8
COL4A3BP-202ENST00000357457 FAM122AQ96E09 287 aa10.07□□□□□ -0.8
COL4A3BP-202ENST00000357457 EPHX3Q9H6B9 360 aa10.07□□□□□ -0.8
COL4A3BP-202ENST00000357457 RYDENQ9NUL5 291 aaKnown RBP10.07□□□□□ -0.8
COL4A3BP-202ENST00000357457 PIEZO1Q92508 2521 aa10.07□□□□□ -0.8
COL4A3BP-202ENST00000357457 A0A0D9SFI3 127 aa10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 MMP3P08254 477 aa10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 SELPP16109 830 aa10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 CASTP20810 708 aaKnown RBP10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 NT5C2P49902 561 aa10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 PDE1AP54750 535 aa10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 WDR5P61964 334 aaKnown RBP10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 ARHGAP1Q07960 439 aa10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 LY6KQ17RY6 165 aa10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 GDF6Q6KF10 455 aaPredicted RBP10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 SPRED2Q7Z698 418 aa10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 DGKHQ86XP1 1220 aa10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 CCDC155Q8N6L0 562 aa10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 SYTL5Q8TDW5 730 aaPredicted RBP10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 DHX38Q92620 1227 aaKnown RBP10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 ANKS1AQ92625 1134 aa10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 EMID1Q96A84 441 aaPredicted RBP10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 FAM227BQ96M60 508 aa10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 IWS1Q96ST2 819 aa10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 LRFN3Q9BTN0 628 aa10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 TOMM22Q9NS69 142 aa10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 DDX41Q9UJV9 622 aaKnown RBP10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 NOD1Q9Y239 953 aa10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 MUC6Q6W4X9 2439 aa10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 MYO7AQ13402 2215 aa10.06□□□□□ -0.8
COL4A3BP-202ENST00000357457 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 ABHD14A-ACY1A0A1B0GW23 586 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 LCHNA4D1U4 455 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 HAS3O00219 553 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 GPR37L1O60883 481 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 NBNO60934 754 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 GJB5O95377 273 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 GH1P01241 217 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 CKBP12277 381 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 KCNJ6P48051 423 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 ERVK-21P61565 698 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 STXBP2Q15833 593 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 ANKRD45Q5TZF3 282 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 CNKSR3Q6P9H4 555 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 TRAF7Q6Q0C0 670 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 MFSD6Q6ZSS7 791 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 ZNF589Q86UQ0 364 aaPredicted RBP10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 NSUN6Q8TEA1 469 aaKnown RBP10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 TAAR1Q96RJ0 339 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 RAD9AQ99638 391 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 UBA5Q9GZZ9 404 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 SUGCTQ9HAC7 445 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 COL20A1Q9P218 1284 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 GTF2IRD1Q9UHL9 959 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 MICAL3Q7RTP6 2002 aa10.05□□□□□ -0.8
COL4A3BP-202ENST00000357457 PI4K2BG5E9Z4 385 aa10.04□□□□□ -0.8
COL4A3BP-202ENST00000357457 EFCAB14O75071 495 aa10.04□□□□□ -0.8
COL4A3BP-202ENST00000357457 EIF3JO75822 258 aaKnown RBP10.04□□□□□ -0.8
COL4A3BP-202ENST00000357457 HOXD8P13378 290 aaPredicted RBP10.04□□□□□ -0.8
COL4A3BP-202ENST00000357457 HAND2P61296 217 aa10.04□□□□□ -0.8
COL4A3BP-202ENST00000357457 DEFB103AP81534 67 aa10.04□□□□□ -0.8
COL4A3BP-202ENST00000357457 DGKDQ16760 1214 aa10.04□□□□□ -0.8
COL4A3BP-202ENST00000357457 TCTN1Q2MV58 587 aa10.04□□□□□ -0.8
COL4A3BP-202ENST00000357457 TRIM71Q2Q1W2 868 aaKnown RBP10.04□□□□□ -0.8
COL4A3BP-202ENST00000357457 USH1GQ495M9 461 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms