RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.82□□□□□ -0.36
COL9A1-202ENST00000357250 ATF2P15336 505 aa12.82□□□□□ -0.36
COL9A1-202ENST00000357250 TMOD1P28289 359 aa12.82□□□□□ -0.36
COL9A1-202ENST00000357250 NUF2Q9BZD4 464 aa12.82□□□□□ -0.36
COL9A1-202ENST00000357250 PPANQ9NQ55 473 aaKnown RBP12.82□□□□□ -0.36
COL9A1-202ENST00000357250 XPOTO43592 962 aaKnown RBP12.82□□□□□ -0.36
COL9A1-202ENST00000357250 AFPP02771 609 aaKnown RBP12.82□□□□□ -0.36
COL9A1-202ENST00000357250 ODR4Q5SWX8 454 aa12.82□□□□□ -0.36
COL9A1-202ENST00000357250 NACC1Q96RE7 527 aa12.82□□□□□ -0.36
COL9A1-202ENST00000357250 FRMPD2Q68DX3 1309 aaPredicted RBP12.82□□□□□ -0.36
COL9A1-202ENST00000357250 USP31Q70CQ4 1352 aa12.82□□□□□ -0.36
COL9A1-202ENST00000357250 TMEM232C9JQI7 657 aa12.82□□□□□ -0.36
COL9A1-202ENST00000357250 TFDP1Q14186 410 aa12.82□□□□□ -0.36
COL9A1-202ENST00000357250 DPCR1Q3MIW9 517 aa12.82□□□□□ -0.36
COL9A1-202ENST00000357250 SARM1Q6SZW1 724 aa12.82□□□□□ -0.36
COL9A1-202ENST00000357250 DGKHQ86XP1 1220 aa12.82□□□□□ -0.36
COL9A1-202ENST00000357250 CD2APQ9Y5K6 639 aa12.82□□□□□ -0.36
COL9A1-202ENST00000357250 TMEM191BP0C7N4 346 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 YARSP54577 528 aaKnown RBP12.81□□□□□ -0.36
COL9A1-202ENST00000357250 MYL7Q01449 175 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 RNASELQ05823 741 aaKnown RBP12.81□□□□□ -0.36
COL9A1-202ENST00000357250 LRRC63Q05C16 580 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 PRKG1Q13976 671 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 KRT81Q14533 505 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 VSTM4Q8IW00 320 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 PPM1KQ8N3J5 372 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 PBKQ96KB5 322 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 GJB4Q9NTQ9 266 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 KIAA1024Q9UPX6 916 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 HMGB1P1B2RPK0 211 aaPredicted RBP12.81□□□□□ -0.36
COL9A1-202ENST00000357250 MYO1FO00160 1098 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 EVI5O60447 810 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 NR2F2P24468 414 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 GUCY2FP51841 1108 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 LRCH2Q5VUJ6 765 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 STK36Q9NRP7 1315 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 CRB1P82279 1406 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 IFNB1P01574 187 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 SLC8A1P32418 973 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 USP14P54578 494 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 CTAGE3PQ8IX95 158 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 CCHCR1Q8TD31 782 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 MRRFQ96E11 262 aaKnown RBP12.81□□□□□ -0.36
COL9A1-202ENST00000357250 PIH1D3Q9NQM4 214 aaKnown RBP12.81□□□□□ -0.36
COL9A1-202ENST00000357250 KIF3CO14782 793 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 PFDN6O15212 129 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 BAG6P46379 1132 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 ORC2Q13416 577 aaPredicted RBP12.81□□□□□ -0.36
COL9A1-202ENST00000357250 RASGRF1Q13972 1273 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 CC2D2BQ6DHV5 1058 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 TRIM50Q86XT4 487 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 CCDC13Q8IYE1 715 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 ACCSQ96QU6 501 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 SERPINB13Q9UIV8 391 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 MAN1B1Q9UKM7 699 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 GINS2Q9Y248 185 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 PALLDQ8WX93 1383 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 C1orf167Q5SNV9 1468 aa12.81□□□□□ -0.36
COL9A1-202ENST00000357250 BFSP1Q12934 665 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 SLC35F6Q8N357 371 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 BCAS4Q8TDM0 211 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 AIFM3Q96NN9 605 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 BRIP1Q9BX63 1249 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 PYCARDQ9ULZ3 195 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 BUB1O43683 1085 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 SH3BP5O60239 455 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 CLNS1AP54105 237 aaKnown RBP12.8□□□□□ -0.36
COL9A1-202ENST00000357250 CLEC4GQ6UXB4 293 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 RPUSD2Q8IZ73 545 aaKnown RBP12.8□□□□□ -0.36
COL9A1-202ENST00000357250 LCORLQ8N3X6 602 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 ZNF579Q8NAF0 562 aaKnown RBP12.8□□□□□ -0.36
COL9A1-202ENST00000357250 CALR3Q96L12 384 aaKnown RBP12.8□□□□□ -0.36
COL9A1-202ENST00000357250 PFDN4Q9NQP4 134 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 CCPG1Q9ULG6 757 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 ADGRB1O14514 1584 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 OVOS2A0A0J9YW53 1432 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 OVOS2Q6IE36 1432 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 GOLGA8QA0A0J9YX86 632 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 GOLGA8OA6NCC3 632 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 GOLGA8NF8WBI6 632 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 HIP1RO75146 1068 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 MCAMP43121 646 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 DIXDC1Q155Q3 683 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 RINT1Q6NUQ1 792 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 TRIM42Q8IWZ5 723 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 CDKL2Q92772 493 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 ST7Q9NRC1 585 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 PGRMC1O00264 195 aaKnown RBP12.8□□□□□ -0.36
COL9A1-202ENST00000357250 FAM186BQ8IYM0 893 aa12.8□□□□□ -0.36
COL9A1-202ENST00000357250 SMCR8Q8TEV9 937 aaPredicted RBP12.8□□□□□ -0.36
COL9A1-202ENST00000357250 POLGP54098 1239 aaPredicted RBP12.79□□□□□ -0.36
COL9A1-202ENST00000357250 ARHGAP4P98171 946 aa12.79□□□□□ -0.36
COL9A1-202ENST00000357250 CACTINQ8WUQ7 758 aaKnown RBP12.79□□□□□ -0.36
COL9A1-202ENST00000357250 RILPQ96NA2 401 aa12.79□□□□□ -0.36
COL9A1-202ENST00000357250 ZWINTO95229 277 aa12.79□□□□□ -0.36
COL9A1-202ENST00000357250 GARSP41250 739 aaKnown RBP12.79□□□□□ -0.36
COL9A1-202ENST00000357250 IRX5P78411 483 aaPredicted RBP12.79□□□□□ -0.36
COL9A1-202ENST00000357250 DNAJC5Q9H3Z4 198 aa12.79□□□□□ -0.36
COL9A1-202ENST00000357250 FAN1Q9Y2M0 1017 aa12.79□□□□□ -0.36
COL9A1-202ENST00000357250 EHHADHQ08426 723 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms