RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 SPATS2Q86XZ4 545 aaKnown RBP9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 CREG2Q8IUH2 290 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 GIMAP8Q8ND71 665 aaPredicted RBP9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 OSBPL9Q96SU4 736 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 NUP58Q9BVL2 599 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 KANSL2Q9H9L4 492 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 TRPM3Q9HCF6 1732 aaPredicted RBP9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 PCDHA4Q9UN74 947 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 NUP188Q5SRE5 1749 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 ECM29Q5VYK3 1845 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 BICDL2A1A5D9 508 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 RASSF10A6NK89 507 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 SSBP05455 408 aaKnown RBP eCLIP9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 TXKP42681 527 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 MECOMQ03112 1051 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 CCDC170Q8IYT3 715 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 TSEN2Q8NCE0 465 aaKnown RBP9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 PARD3BQ8TEW8 1205 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 LRRC15Q8TF66 581 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 SPDL1Q96EA4 605 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 CRNKL1Q9BZJ0 848 aaKnown RBP9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 DCP1AQ9NPI6 582 aaPredicted RBP9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 DDX20Q9UHI6 824 aaKnown RBP9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 ANAPC4Q9UJX5 808 aa9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 PACSIN2Q9UNF0 486 aaPredicted RBP9.1□□□□□ -0.95
CDC42SE1-201ENST00000357235 ATXN2Q99700 1313 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 LRRC53A6NM62 1247 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 KLRC4O43908 158 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 RHOBTB3O94955 611 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 CCNE1P24864 410 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 RPS6KA3P51812 740 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 NAPAP54920 295 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 LRRC41Q15345 812 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 SNCBQ16143 134 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 MICALCLQ6ZW33 695 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 SMIM5Q71RC9 77 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 FAM114A1Q8IWE2 563 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 SLC44A5Q8NCS7 719 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 ZBTB10Q96DT7 871 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 SAAL1Q96ER3 474 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 RBM12Q9NTZ6 932 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 ARHGAP20Q9P2F6 1191 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 NFU1Q9UMS0 254 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 PKD1L3Q7Z443 1732 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 ZC3H4Q9UPT8 1303 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 LAMB4A4D0S4 1761 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 ANO9A1A5B4 782 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 FTCDO95954 541 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 HPDP32754 393 aaPredicted RBP9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 IL6STP40189 918 aaPredicted RBP9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 SLC8A3P57103 927 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 GUCY2DQ02846 1103 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 MEA1Q16626 185 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 RNF187Q5TA31 235 aaPredicted RBP9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 C4orf32Q8N8J7 132 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 ZNF384Q8TF68 577 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 CDK5RAP3Q96JB5 506 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 CCDC43Q96MW1 224 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 TSGA10Q9BZW7 698 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 TRIM9Q9C026 710 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 RPS6KL1Q9Y6S9 549 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 MYH2Q9UKX2 1941 aa9.09□□□□□ -0.95
CDC42SE1-201ENST00000357235 ERVV-1B6SEH8 477 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 OPA1O60313 960 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 TSPY3P0CV98 308 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 TSPY8P0CW00 308 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 KCNQ4P56696 695 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 RCSD1Q6JBY9 416 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 MAATS1Q7Z4T9 603 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 DZIP1Q86YF9 867 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 CCDC50Q8IVM0 306 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 DHTKD1Q96HY7 919 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 BRIP1Q9BX63 1249 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 EPB41L5Q9HCM4 733 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 TBC1D7Q9P0N9 293 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 STIM2Q9P246 746 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 PCDHA6Q9UN73 950 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 PCDHA8Q9Y5H6 950 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 TNS2Q63HR2 1409 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 RPSAP08865 295 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 PECAM1P16284 738 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 CARSP49589 748 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 GUCY1A3Q02108 690 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 APBA1Q02410 837 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 NNTQ13423 1086 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 HLTFQ14527 1009 aaKnown RBP eCLIP9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 PDCD2Q16342 344 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 MIIPQ5JXC2 388 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 CFAP58Q5T655 872 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 KLHL7Q8IXQ5 586 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 FNBP4Q8N3X1 1017 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 PROCA1Q8NCQ7 364 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 AENQ8WTP8 325 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 RSRC1Q96IZ7 334 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 SCLT1Q96NL6 688 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 NDST4Q9H3R1 872 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 SH2D4AQ9H788 454 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 KBTBD4Q9NVX7 518 aa9.08□□□□□ -0.96
CDC42SE1-201ENST00000357235 SAP30BPQ9UHR5 308 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms