RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 SPECC1L-ADORA2AF8WAN1 911 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 SGK1O00141 431 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 MAPK4P31152 587 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 CYP4A11Q02928 519 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 ARHGEF16Q5VV41 709 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 ZNF653Q96CK0 615 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 PCDHA13Q9Y5I0 950 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 JADE1Q6IE81 842 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 FAM186BQ8IYM0 893 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 PCDHA1Q9Y5I3 950 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 CAPN9O14815 690 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 TTC4O95801 387 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 SERPING1P05155 500 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 FAM133BQ5BKY9 247 aaKnown RBP16.13■□□□□ 0.17
CHD4-201ENST00000357008 HACE1Q8IYU2 909 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 TAB3Q8N5C8 712 aaPredicted RBP16.13■□□□□ 0.17
CHD4-201ENST00000357008 CD2APQ9Y5K6 639 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 GJA3Q9Y6H8 435 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 WDR46O15213 610 aaKnown RBP16.13■□□□□ 0.17
CHD4-201ENST00000357008 TMEM191BP0C7N4 346 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 HIBCHQ6NVY1 386 aaPredicted RBP16.13■□□□□ 0.17
CHD4-201ENST00000357008 SCOCQ9UIL1 159 aa16.13■□□□□ 0.17
CHD4-201ENST00000357008 PPFIA2O75334 1257 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 DLGAP5Q15398 846 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 ANKRD20A4Q4UJ75 823 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 ANKRD20A8PQ5CZ79 823 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 ANKRD20A2Q5SQ80 823 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 ANKRD20A1Q5TYW2 823 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 TTBK2Q6IQ55 1244 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 MCF2L2Q86YR7 1114 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.12■□□□□ 0.17
CHD4-201ENST00000357008 BAG5Q9UL15 447 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 M0R2C6 588 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 RASGRF2O14827 1237 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 PFDN1O60925 122 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 SKIP12755 728 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 CCDC24Q8N4L8 307 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 POMGNT1Q8WZA1 660 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 GCFC2P16383 781 aaKnown RBP16.12■□□□□ 0.17
CHD4-201ENST00000357008 ADORA1P30542 326 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 PDE6BP35913 854 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 TAF11Q15544 211 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 SLFNL1Q499Z3 407 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 PPP1R2P3Q6NXS1 205 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 CHRNDQ07001 517 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 CUL1Q13616 776 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 LARGE2Q8N3Y3 721 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 PNMA2Q9UL42 364 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 MAGI2Q86UL8 1455 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 LARGE1O95461 756 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 MSH2P43246 934 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 TMED2Q15363 201 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 CYP4F22Q6NT55 531 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 FAM133AQ8N9E0 248 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 PDZD8Q8NEN9 1154 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 FAM81BQ96LP2 452 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 EPS15L1Q9UBC2 864 aa16.12■□□□□ 0.17
CHD4-201ENST00000357008 ECM2O94769 699 aaPredicted RBP16.11■□□□□ 0.17
CHD4-201ENST00000357008 PIK3CAP42336 1068 aa16.11■□□□□ 0.17
CHD4-201ENST00000357008 MAGEA9P43362 315 aa16.11■□□□□ 0.17
CHD4-201ENST00000357008 PABPC4Q13310 644 aaKnown RBP eCLIP16.11■□□□□ 0.171e-9■■■□□ 18.4
CHD4-201ENST00000357008 CCHCR1Q8TD31 782 aa16.11■□□□□ 0.17
CHD4-201ENST00000357008 MMS19Q96T76 1030 aa16.11■□□□□ 0.17
CHD4-201ENST00000357008 FMO2Q99518 471 aa16.11■□□□□ 0.17
CHD4-201ENST00000357008 THRAP3Q9Y2W1 955 aaKnown RBP16.11■□□□□ 0.17
CHD4-201ENST00000357008 MFAP3LO75121 409 aa16.11■□□□□ 0.17
CHD4-201ENST00000357008 CERKLQ49MI3 558 aaPredicted RBP16.11■□□□□ 0.17
CHD4-201ENST00000357008 SH2B2O14492 632 aaPredicted RBP16.11■□□□□ 0.17
CHD4-201ENST00000357008 ASPRV1Q53RT3 343 aa16.11■□□□□ 0.17
CHD4-201ENST00000357008 GPATCH4Q5T3I0 446 aaKnown RBP16.11■□□□□ 0.17
CHD4-201ENST00000357008 SLFN13Q68D06 897 aa16.11■□□□□ 0.17
CHD4-201ENST00000357008 SEPT10Q9P0V9 454 aa16.11■□□□□ 0.17
CHD4-201ENST00000357008 H0YIN7 160 aa16.11■□□□□ 0.17
CHD4-201ENST00000357008 ALAS1P13196 640 aa16.11■□□□□ 0.17
CHD4-201ENST00000357008 ATP1A3P13637 1013 aa16.11■□□□□ 0.17
CHD4-201ENST00000357008 BTDP43251 543 aa16.11■□□□□ 0.17
CHD4-201ENST00000357008 NR5A1Q13285 461 aa16.11■□□□□ 0.17
CHD4-201ENST00000357008 LRRC41Q15345 812 aa16.11■□□□□ 0.17
CHD4-201ENST00000357008 PSMD2Q13200 908 aa16.11■□□□□ 0.17
CHD4-201ENST00000357008 PAGE5Q96GU1 130 aa16.11■□□□□ 0.17
CHD4-201ENST00000357008 IFT122Q9HBG6 1241 aa16.11■□□□□ 0.17
CHD4-201ENST00000357008 ADAM21Q9UKJ8 722 aa16.11■□□□□ 0.17
CHD4-201ENST00000357008 M0QZ92 97 aa16.1■□□□□ 0.17
CHD4-201ENST00000357008 SEMA3EO15041 775 aa16.1■□□□□ 0.17
CHD4-201ENST00000357008 ICA1Q05084 483 aa16.1■□□□□ 0.17
CHD4-201ENST00000357008 SEPT2Q15019 361 aa16.1■□□□□ 0.17
CHD4-201ENST00000357008 C6orf118Q5T5N4 469 aa16.1■□□□□ 0.17
CHD4-201ENST00000357008 RFX6Q8HWS3 928 aa16.1■□□□□ 0.17
CHD4-201ENST00000357008 SMCR8Q8TEV9 937 aaPredicted RBP16.1■□□□□ 0.17
CHD4-201ENST00000357008 PUS3Q9BZE2 481 aaKnown RBP16.1■□□□□ 0.17
CHD4-201ENST00000357008 AATKQ6ZMQ8 1374 aa16.1■□□□□ 0.17
CHD4-201ENST00000357008 PFDN6O15212 129 aa16.1■□□□□ 0.17
CHD4-201ENST00000357008 NECTIN1Q15223 517 aa16.1■□□□□ 0.17
CHD4-201ENST00000357008 NME8Q8N427 588 aa16.1■□□□□ 0.17
CHD4-201ENST00000357008 AMNQ9BXJ7 453 aa16.1■□□□□ 0.17
CHD4-201ENST00000357008 CACYBPQ9HB71 228 aaKnown RBP16.1■□□□□ 0.17
CHD4-201ENST00000357008 A6NJR5 290 aa16.1■□□□□ 0.17
CHD4-201ENST00000357008 ATP2B4P23634 1241 aa16.1■□□□□ 0.17
CHD4-201ENST00000357008 ADCY1Q08828 1119 aa16.1■□□□□ 0.17
CHD4-201ENST00000357008 GLE1Q53GS7 698 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms