RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PIK3R5Q8WYR1 880 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 TBC1D5Q92609 795 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 NOX5Q96PH1 765 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 MMTAG2Q9BU76 263 aaKnown RBP11.2□□□□□ -0.62
PTPRA-203ENST00000356147 MAD2L2Q9UI95 211 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 TAF1P21675 1872 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 RAD51CO43502 376 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 POLR2FP61218 127 aaKnown RBP11.2□□□□□ -0.62
PTPRA-203ENST00000356147 CFAP221Q4G0U5 840 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 USP17L2Q6R6M4 530 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 GBP6Q6ZN66 633 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 ZNF662Q6ZS27 426 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 IFT20Q8IY31 132 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 BAP1Q92560 729 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 AP1M1Q9BXS5 423 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 CRNKL1Q9BZJ0 848 aaKnown RBP11.2□□□□□ -0.62
PTPRA-203ENST00000356147 UBA5Q9GZZ9 404 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 ADAMTS1Q9UHI8 967 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 PLAAQ9Y263 795 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 STXBP3O00186 592 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 MEFVO15553 781 aaPredicted RBP11.2□□□□□ -0.62
PTPRA-203ENST00000356147 TLR2O60603 784 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 IL6STP40189 918 aaPredicted RBP11.2□□□□□ -0.62
PTPRA-203ENST00000356147 RAPGEF1Q13905 1077 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 ERFEQ4G0M1 354 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 KCNK18Q7Z418 384 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 TXNRD3Q86VQ6 643 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 ZSCAN29Q8IWY8 852 aaPredicted RBP11.2□□□□□ -0.62
PTPRA-203ENST00000356147 IQCKQ8N0W5 287 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 NOC3LQ8WTT2 800 aaKnown RBP11.2□□□□□ -0.62
PTPRA-203ENST00000356147 CCT8L2Q96SF2 557 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 FGFBP2Q9BYJ0 223 aa11.2□□□□□ -0.62
PTPRA-203ENST00000356147 SMCO2A6NFE2 343 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 M0R2N6 131 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 ATP6V1AP38606 617 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 KCNMA1Q12791 1236 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 SF3B2Q13435 895 aaKnown RBP11.19□□□□□ -0.62
PTPRA-203ENST00000356147 DIXDC1Q155Q3 683 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 ALS2CLQ60I27 953 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 TBCKQ8TEA7 893 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 LRRC4CQ9HCJ2 640 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 BCORQ6W2J9 1755 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 TOGARAM1Q9Y4F4 1720 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 A0A087X0T9 212 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 ERVV-1B6SEH8 477 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 ECM2O94769 699 aaPredicted RBP11.19□□□□□ -0.62
PTPRA-203ENST00000356147 FAM228BP0C875 321 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 TSPY3P0CV98 308 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 TSPY8P0CW00 308 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 CRKLP46109 303 aaKnown RBP11.19□□□□□ -0.62
PTPRA-203ENST00000356147 FNTAP49354 379 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 SKOR1P84550 965 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 KIAA0753Q2KHM9 967 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 HGSNATQ68CP4 663 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 TMED8Q6PL24 325 aaPredicted RBP11.19□□□□□ -0.62
PTPRA-203ENST00000356147 FAM133AQ8N9E0 248 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 MINPP1Q9UNW1 487 aa11.19□□□□□ -0.62
PTPRA-203ENST00000356147 KLRF2D3W0D1 207 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 TRAF5O00463 557 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 KCNK3O14649 394 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 PPP1R37O75864 691 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 NTSR2O95665 410 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 FGRP09769 529 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 MAN2A1Q16706 1144 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 PDXDC1Q6P996 788 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 NLRP14Q86W24 1093 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 MYCBPAPQ8TBZ2 947 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 LSM14BQ9BX40 385 aaKnown RBP11.18□□□□□ -0.62
PTPRA-203ENST00000356147 ZHX3Q9H4I2 956 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 BLOC1S4Q9NUP1 217 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 GEMIN8Q9NWZ8 242 aaKnown RBP11.18□□□□□ -0.62
PTPRA-203ENST00000356147 NUP98P52948 1817 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 DOCK2Q92608 1830 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 A0A1W2PQJ5 194 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 DCDC2CA8MYV0 355 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 ORC4O43929 436 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 TDP2O95551 362 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 MAP2K2P36507 400 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 FLT3P36888 993 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 HSPA2P54652 639 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 GRB10Q13322 594 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 PTGISQ16647 500 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 CCDC40Q4G0X9 1142 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 CENPPQ6IPU0 288 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 CNNM4Q6P4Q7 775 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 INTS5Q6P9B9 1019 aaKnown RBP11.18□□□□□ -0.62
PTPRA-203ENST00000356147 B4GALNT4Q76KP1 1039 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 SV2BQ7L1I2 683 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 CAVIN3Q969G5 261 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 CDK5RAP3Q96JB5 506 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 C7orf25Q9BPX7 421 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 TRIM31Q9BZY9 425 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 EPN3Q9H201 632 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 YY1AP1Q9H869 796 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 PAK2Q13177 524 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 GRIK5Q16478 980 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 QPCTQ16769 361 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 ODF2Q5BJF6 829 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 CALML4Q96GE6 196 aa11.18□□□□□ -0.62
PTPRA-203ENST00000356147 GPR101Q96P66 508 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms