RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 TRIM4Q9C037 500 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 BCAMP50895 628 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 SLFN12Q8IYM2 578 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 ATP2B4P23634 1241 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 LRCH2Q5VUJ6 765 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 KLC3Q6P597 504 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 HPCAL4Q9UM19 191 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 DOLKQ9UPQ8 538 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 TUBB4AP04350 444 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 GOLGA8FQ08AF8 430 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 GOLGA8DPQ0D2H9 430 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 RINLQ6ZS11 566 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 MAP7D3Q8IWC1 876 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 MAGOHBQ96A72 148 aaKnown RBP18.68■□□□□ 0.58
COL27A1-201ENST00000356083 SH3KBP1Q96B97 665 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 DCAF5Q96JK2 942 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 OGFRQ9NZT2 677 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 MYL7Q01449 175 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 KCTD16Q68DU8 428 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 TRIM55Q9BYV6 548 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 VGLL3A8MV65 326 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 ZBTB17Q13105 803 aa18.68■□□□□ 0.58
COL27A1-201ENST00000356083 EIF4A2Q14240 407 aaKnown RBP18.68■□□□□ 0.58
COL27A1-201ENST00000356083 USP17L12C9JPN9 530 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 USP17L21D6R901 530 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 PCDHB15Q9Y5E8 787 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 EHBP1L1Q8N3D4 1523 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 TFDP1Q14186 410 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 MYO1FO00160 1098 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 ZAP70P43403 619 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 NLRP12P59046 1061 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 UBE3AQ05086 875 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 TNNI3KQ59H18 835 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 FAM49AQ9H0Q0 323 aaPredicted RBP18.67■□□□□ 0.58
COL27A1-201ENST00000356083 FPGT-TNNI3KV9GXZ4 949 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 ADGRL1O94910 1474 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 PSMC1P62191 440 aaKnown RBP18.67■□□□□ 0.58
COL27A1-201ENST00000356083 ATG16L1Q676U5 607 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 DESI2Q9BSY9 194 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 TSKSQ9UJT2 592 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 KCNJ18B7U540 433 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 MAPK4P31152 587 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 CCNA1P78396 465 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 MORC3Q14149 939 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 KCNJ12Q14500 433 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 ODR4Q5SWX8 454 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 ARMC9Q7Z3E5 817 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 ZNF577Q9BSK1 485 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 HIPK4Q8NE63 616 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 HEXIM2Q96MH2 286 aaKnown RBP18.67■□□□□ 0.58
COL27A1-201ENST00000356083 KRT87PA6NCN2 255 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 LONP1P36776 959 aaKnown RBP18.67■□□□□ 0.58
COL27A1-201ENST00000356083 SIX6OS1Q8N1H7 587 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 CACTINQ8WUQ7 758 aaKnown RBP18.67■□□□□ 0.58
COL27A1-201ENST00000356083 MAML1Q92585 1016 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 DBNDD2Q9BQY9 259 aa18.67■□□□□ 0.58
COL27A1-201ENST00000356083 SUPT3HB4E1H0 165 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 THEMIS2Q5TEJ8 643 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 ADALQ6DHV7 355 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 MLKLQ8NB16 471 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 ZNF233A6NK53 670 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 PI4K2BG5E9Z4 385 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 RNMTO43148 476 aaKnown RBP18.66■□□□□ 0.58
COL27A1-201ENST00000356083 TMED2Q15363 201 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 ABCB5Q2M3G0 1257 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 PARP10Q53GL7 1025 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 TEX2Q8IWB9 1127 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 NDUFAF2Q8N183 169 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 F8W8V4 182 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 ARL4AP40617 200 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 ARAP1Q96P48 1450 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 TMEM232C9JQI7 657 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 GNGT1P63211 74 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 TAF11Q15544 211 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 KMT5AQ9NQR1 393 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 SMAD1Q15797 465 aaKnown RBP18.66■□□□□ 0.58
COL27A1-201ENST00000356083 MIGA2Q7L4E1 593 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 CYTH2Q99418 400 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 TEX12Q9BXU0 123 aa18.66■□□□□ 0.58
COL27A1-201ENST00000356083 DNAJC6O75061 913 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 LPIN2Q92539 896 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 ERO1AQ96HE7 468 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 CENPAP49450 140 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 TSPYL6Q8N831 410 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 KIAA1024Q9UPX6 916 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 SKOR1P84550 965 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 ICA1Q05084 483 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 MIS18BP1Q6P0N0 1132 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 RNF135Q8IUD6 432 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 EFHD1Q9BUP0 239 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 RASSF7Q02833 373 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 H0YC42 278 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 CHMLP26374 656 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 SLMAPQ14BN4 828 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 NKX1-1Q15270 411 aaPredicted RBP18.65■□□□□ 0.58
COL27A1-201ENST00000356083 CBX8Q9HC52 389 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 ATF5Q9Y2D1 282 aaPredicted RBP18.65■□□□□ 0.58
COL27A1-201ENST00000356083 GCP02774 474 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 CIITAP33076 1130 aa18.65■□□□□ 0.58
COL27A1-201ENST00000356083 GYG1P46976 350 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms