RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 AFPP02771 609 aaKnown RBP14.39□□□□□ -0.11
SCN8A-202ENST00000355133 CDC25AP30304 524 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 ECE1P42892 770 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 BPIFB4P59827 614 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 MAP7D3Q8IWC1 876 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 LRFN2Q9ULH4 789 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 ENC1O14682 589 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 LMNB1P20700 586 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 OSTNP61366 133 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 TFAMQ00059 246 aaKnown RBP14.39□□□□□ -0.11
SCN8A-202ENST00000355133 GUCY2DQ02846 1103 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 NR5A1Q13285 461 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 KRT27Q7Z3Y8 459 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 TRIM56Q9BRZ2 755 aaKnown RBP14.39□□□□□ -0.11
SCN8A-202ENST00000355133 MAGED2Q9UNF1 606 aaPredicted RBP14.39□□□□□ -0.11
SCN8A-202ENST00000355133 PFDN6O15212 129 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 GAP43P17677 238 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 TRAPPC10P48553 1259 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 PRPSAP1Q14558 356 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 P2RX5Q93086 422 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 UBN2Q6ZU65 1347 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 PASKQ96RG2 1323 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 RNASELQ05823 741 aaKnown RBP14.39□□□□□ -0.11
SCN8A-202ENST00000355133 MTERF2Q49AM1 385 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 PHLDB2Q86SQ0 1253 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 RNF10Q8N5U6 811 aaKnown RBP14.39□□□□□ -0.11
SCN8A-202ENST00000355133 GSDMAQ96QA5 445 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 CUEDC2Q9H467 287 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 BCL2L12Q9HB09 334 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 A0A087WWV3 80 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 A0A1W2PQ27 194 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 A0A1W2PQ64 194 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 A0A1W2PQD8 194 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 USP17L3A6NCW0 530 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 USP17L4A6NCW7 530 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 POC1B-GALNT4F8VUJ3 575 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 CLNS1AP54105 237 aaKnown RBP14.39□□□□□ -0.11
SCN8A-202ENST00000355133 USP17L1Q7RTZ2 530 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 FAM71BQ8TC56 605 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 ZNF653Q96CK0 615 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 MRFAP1L1Q96HT8 127 aa14.39□□□□□ -0.11
SCN8A-202ENST00000355133 FTOQ9C0B1 505 aaKnown RBP eCLIP14.39□□□□□ -0.11
SCN8A-202ENST00000355133 GOLGA8KD6RF30 607 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 PTPREP23469 700 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 TMC4Q7Z404 712 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 RYBPQ8N488 228 aaPredicted RBP14.38□□□□□ -0.11
SCN8A-202ENST00000355133 OSBP2Q969R2 916 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 RAB3IPQ96QF0 476 aaPredicted RBP14.38□□□□□ -0.11
SCN8A-202ENST00000355133 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.38□□□□□ -0.11
SCN8A-202ENST00000355133 RBL2Q08999 1139 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 SNX1Q13596 522 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 METTL23Q86XA0 190 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 C7orf31Q8N865 590 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 SLC17A8Q8NDX2 589 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 HDAC11Q96DB2 347 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 TACO1Q9BSH4 297 aaKnown RBP14.38□□□□□ -0.11
SCN8A-202ENST00000355133 WDR11Q9BZH6 1224 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 RASSF2P50749 326 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 LLGL1Q15334 1064 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 ARMC9Q7Z3E5 817 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.38□□□□□ -0.11
SCN8A-202ENST00000355133 AK8Q96MA6 479 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 NXF1Q9UBU9 619 aaKnown RBP14.38□□□□□ -0.11
SCN8A-202ENST00000355133 WDR17Q8IZU2 1322 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 IGSF1Q8N6C5 1336 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 A0A1B0GUA9 196 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 SLC4A1P02730 911 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 MAPK4P31152 587 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 GARSP41250 739 aaKnown RBP14.38□□□□□ -0.11
SCN8A-202ENST00000355133 NOP9Q86U38 636 aaKnown RBP14.38□□□□□ -0.11
SCN8A-202ENST00000355133 NACC1Q96RE7 527 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 JPH2Q9BR39 696 aaPredicted RBP14.38□□□□□ -0.11
SCN8A-202ENST00000355133 KIF9Q9HAQ2 790 aa14.38□□□□□ -0.11
SCN8A-202ENST00000355133 ANAPC5Q9UJX4 755 aa14.37□□□□□ -0.11
SCN8A-202ENST00000355133 RIPOR2Q9Y4F9 1068 aa14.37□□□□□ -0.11
SCN8A-202ENST00000355133 MECOMQ03112 1051 aa14.37□□□□□ -0.11
SCN8A-202ENST00000355133 MCUQ8NE86 351 aa14.37□□□□□ -0.11
SCN8A-202ENST00000355133 DHTKD1Q96HY7 919 aaPredicted RBP14.37□□□□□ -0.11
SCN8A-202ENST00000355133 IPO11Q9UI26 975 aaKnown RBP14.37□□□□□ -0.11
SCN8A-202ENST00000355133 ABCC12Q96J65 1359 aa14.37□□□□□ -0.11
SCN8A-202ENST00000355133 SH2B2O14492 632 aaPredicted RBP14.37□□□□□ -0.11
SCN8A-202ENST00000355133 ATXN8OSP0DMR3 200 aa14.37□□□□□ -0.11
SCN8A-202ENST00000355133 HOXA13P31271 388 aaPredicted RBP14.37□□□□□ -0.11
SCN8A-202ENST00000355133 ETF1P62495 437 aaKnown RBP14.37□□□□□ -0.11
SCN8A-202ENST00000355133 BBOF1Q8ND07 529 aa14.37□□□□□ -0.11
SCN8A-202ENST00000355133 CCNYQ8ND76 341 aa14.37□□□□□ -0.11
SCN8A-202ENST00000355133 MMP1P03956 469 aa14.37□□□□□ -0.11
SCN8A-202ENST00000355133 JADE1Q6IE81 842 aa14.37□□□□□ -0.11
SCN8A-202ENST00000355133 CDKL2Q92772 493 aa14.37□□□□□ -0.11
SCN8A-202ENST00000355133 MAGOHBQ96A72 148 aaKnown RBP14.37□□□□□ -0.11
SCN8A-202ENST00000355133 FAM114A2Q9NRY5 505 aa14.37□□□□□ -0.11
SCN8A-202ENST00000355133 BZW2Q9Y6E2 419 aaKnown RBP14.37□□□□□ -0.11
SCN8A-202ENST00000355133 XPAP23025 273 aaPredicted RBP14.37□□□□□ -0.11
SCN8A-202ENST00000355133 DYNLT1P63172 113 aa14.37□□□□□ -0.11
SCN8A-202ENST00000355133 KIF23Q02241 960 aaPredicted RBP14.37□□□□□ -0.11
SCN8A-202ENST00000355133 CCDC93Q567U6 631 aa14.37□□□□□ -0.11
SCN8A-202ENST00000355133 RAPH1Q70E73 1250 aa14.37□□□□□ -0.11
SCN8A-202ENST00000355133 SLC38A10Q9HBR0 1119 aa14.37□□□□□ -0.11
SCN8A-202ENST00000355133 PI4KBQ9UBF8 816 aa14.37□□□□□ -0.11
SCN8A-202ENST00000355133 ZNF215Q9UL58 517 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms