RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 LIG3P49916 1009 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 FXR2P51116 673 aaKnown RBP eCLIP12.62□□□□□ -0.39
CAPN9-202ENST00000354537 DDR1Q08345 913 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 DRP2Q13474 957 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 PLCB4Q15147 1175 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 NAB2Q15742 525 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 SLC9C1Q4G0N8 1177 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 HGSNATQ68CP4 663 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 SPTY2D1Q68D10 685 aaPredicted RBP12.62□□□□□ -0.39
CAPN9-202ENST00000354537 CLEC4GQ6UXB4 293 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 NEK8Q86SG6 692 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 STAG2Q8N3U4 1231 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 PLIN2Q99541 437 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 TSG101Q99816 390 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 MMTAG2Q9BU76 263 aaKnown RBP12.62□□□□□ -0.39
CAPN9-202ENST00000354537 CEP72Q9P209 647 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 hCG_1984214I3L0E3 225 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 SLC7A5Q01650 507 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 CDC37Q16543 378 aaPredicted RBP12.62□□□□□ -0.39
CAPN9-202ENST00000354537 PPP4R3AQ6IN85 833 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 HEATR3Q7Z4Q2 680 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 ARFGAP2Q8N6H7 521 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 ZNF713Q8N859 430 aaPredicted RBP12.62□□□□□ -0.39
CAPN9-202ENST00000354537 TACO1Q9BSH4 297 aaKnown RBP12.62□□□□□ -0.39
CAPN9-202ENST00000354537 FAM207AQ9NSI2 230 aaPredicted RBP12.62□□□□□ -0.39
CAPN9-202ENST00000354537 PCDHGC5Q9Y5F6 944 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 MYH1P12882 1939 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 EPHB6O15197 1021 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 MYBP10242 640 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 CYP2D6P10635 497 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 HSPA9P38646 679 aaKnown RBP12.61□□□□□ -0.39
CAPN9-202ENST00000354537 MATR3P43243 847 aaKnown RBP eCLIP12.61□□□□□ -0.39
CAPN9-202ENST00000354537 FNTAP49354 379 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 EHHADHQ08426 723 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 PDIA5Q14554 519 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 C10orf76Q5T2E6 689 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 CACNA2D4Q7Z3S7 1137 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 OTUD6BQ8N6M0 293 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 KAT2BQ92831 832 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 MYCBPQ99417 103 aaPredicted RBP12.61□□□□□ -0.39
CAPN9-202ENST00000354537 ATP8B3O60423 1300 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 CYTH3O43739 400 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 CCNT1O60563 726 aaKnown RBP12.61□□□□□ -0.39
CAPN9-202ENST00000354537 GNA14O95837 355 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 LSP1P33241 339 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 CRKLP46109 303 aaKnown RBP12.61□□□□□ -0.39
CAPN9-202ENST00000354537 GSCP56915 257 aaPredicted RBP12.61□□□□□ -0.39
CAPN9-202ENST00000354537 TNNC1P63316 161 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 SLC35G1Q2M3R5 365 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 SLC10A5Q5PT55 438 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 MEI1Q5TIA1 1274 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 LRRC55Q6ZSA7 311 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 MTMR8Q96EF0 704 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 ATP6V1G3Q96LB4 118 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 DRC1Q96MC2 740 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 CCDC43Q96MW1 224 aaKnown RBP12.61□□□□□ -0.39
CAPN9-202ENST00000354537 ANKRD2Q9GZV1 360 aa12.61□□□□□ -0.39
CAPN9-202ENST00000354537 ZNF233A6NK53 670 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 PPP1R37O75864 691 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 HEXIM1O94992 359 aaKnown RBP12.6□□□□□ -0.39
CAPN9-202ENST00000354537 GLI1P08151 1106 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 NAP1L1P55209 391 aaKnown RBP12.6□□□□□ -0.39
CAPN9-202ENST00000354537 SETQ01105 290 aaPredicted RBP12.6□□□□□ -0.39
CAPN9-202ENST00000354537 RASSF7Q02833 373 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 GRB10Q13322 594 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 SFMBT2Q5VUG0 894 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 PLCD3Q8N3E9 789 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 PIK3R5Q8WYR1 880 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 CEP63Q96MT8 703 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 MTMR9Q96QG7 549 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 RAB34Q9BZG1 259 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 EHD4Q9H223 541 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 SLC39A2Q9NP94 309 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 BLOC1S4Q9NUP1 217 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 MCM9Q9NXL9 1143 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 SALL4Q9UJQ4 1053 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 XIRP1Q702N8 1843 aaKnown RBP12.6□□□□□ -0.39
CAPN9-202ENST00000354537 MYMKA6NI61 221 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 HIBADHP31937 336 aaKnown RBP12.6□□□□□ -0.39
CAPN9-202ENST00000354537 CARSP49589 748 aaKnown RBP12.6□□□□□ -0.39
CAPN9-202ENST00000354537 MARSP56192 900 aaKnown RBP12.6□□□□□ -0.39
CAPN9-202ENST00000354537 PDCLQ13371 301 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 PTGISQ16647 500 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 LETM2Q2VYF4 491 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 LARP4BQ92615 738 aaKnown RBP12.6□□□□□ -0.39
CAPN9-202ENST00000354537 ZNF287Q9HBT7 754 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 EPB41L5Q9HCM4 733 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 PLCB1Q9NQ66 1216 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 TMEM59LQ9UK28 342 aa12.6□□□□□ -0.39
CAPN9-202ENST00000354537 BHMG1C9JSJ3 638 aaPredicted RBP12.59□□□□□ -0.39
CAPN9-202ENST00000354537 SLC26A4O43511 780 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 NCK2O43639 380 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 NR1D1P20393 614 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 CXCR5P32302 372 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 MDH1P40925 334 aaKnown RBP12.59□□□□□ -0.39
CAPN9-202ENST00000354537 TECP42680 631 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 SLC1A4P43007 532 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 NAPAP54920 295 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 GFPT1Q06210 699 aaPredicted RBP12.59□□□□□ -0.39
CAPN9-202ENST00000354537 KCNMA1Q12791 1236 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms