RNA–Protein interactions for RNA: ENST00000354500.6

TRPM3-201, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 1 (best)

Gene TRPM3, Length 4,459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-201ENST00000354500 CHP1Q99653 195 aa13.4□□□□□ -0.26
TRPM3-201ENST00000354500 SUGCTQ9HAC7 445 aa13.4□□□□□ -0.26
TRPM3-201ENST00000354500 LARSQ9P2J5 1176 aaKnown RBP13.4□□□□□ -0.26
TRPM3-201ENST00000354500 PTPN22Q9Y2R2 807 aa13.4□□□□□ -0.26
TRPM3-201ENST00000354500 ABCC12Q96J65 1359 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 CCDC151A5D8V7 595 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 KIF11P52732 1056 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 CTTNQ14247 550 aaKnown RBP13.39□□□□□ -0.27
TRPM3-201ENST00000354500 GPATCH4Q5T3I0 446 aaKnown RBP13.39□□□□□ -0.27
TRPM3-201ENST00000354500 ARHGEF1Q92888 912 aaKnown RBP13.39□□□□□ -0.27
TRPM3-201ENST00000354500 NAP1L3Q99457 506 aaPredicted RBP13.39□□□□□ -0.27
TRPM3-201ENST00000354500 HPS5Q9UPZ3 1129 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 RNF40O75150 1001 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 TDP2O95551 362 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 PLA2G4BP0C869 781 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 STRN3Q13033 797 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 TRPC3Q13507 836 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 GRAPQ13588 217 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 POTEDQ86YR6 584 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 GRAPLQ8TC17 118 aaPredicted RBP13.39□□□□□ -0.27
TRPM3-201ENST00000354500 CD209Q9NNX6 404 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 FBXO2Q9UK22 296 aaPredicted RBP13.39□□□□□ -0.27
TRPM3-201ENST00000354500 C21orf2O43822 256 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 IFNAR2P48551 515 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 CASP8Q14790 479 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 ASPRV1Q53RT3 343 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 AP1M1Q9BXS5 423 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 NUCKS1Q9H1E3 243 aaKnown RBP13.39□□□□□ -0.27
TRPM3-201ENST00000354500 ABHD10Q9NUJ1 306 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 CCPG1Q9ULG6 757 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.39□□□□□ -0.27
TRPM3-201ENST00000354500 ADGRG1Q9Y653 693 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 IVNS1ABPQ9Y6Y0 642 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 PTPRUQ92729 1446 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 RPGRIP1Q96KN7 1286 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 AK8Q96MA6 479 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 MLXIPQ9HAP2 919 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 NKIRAS1Q9NYS0 192 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 TFR2Q9UP52 801 aa13.39□□□□□ -0.27
TRPM3-201ENST00000354500 ESYT3A0FGR9 886 aa13.38□□□□□ -0.27
TRPM3-201ENST00000354500 GNA14O95837 355 aa13.38□□□□□ -0.27
TRPM3-201ENST00000354500 PPP1R21Q6ZMI0 780 aa13.38□□□□□ -0.27
TRPM3-201ENST00000354500 ZNF354CQ86Y25 554 aa13.38□□□□□ -0.27
TRPM3-201ENST00000354500 PANX2Q96RD6 677 aa13.38□□□□□ -0.27
TRPM3-201ENST00000354500 ALDH8A1Q9H2A2 487 aaPredicted RBP13.38□□□□□ -0.27
TRPM3-201ENST00000354500 USP17L10C9JJH3 530 aa13.38□□□□□ -0.27
TRPM3-201ENST00000354500 NOP56O00567 594 aaKnown RBP13.38□□□□□ -0.27
TRPM3-201ENST00000354500 PPP2R5DQ14738 602 aa13.38□□□□□ -0.27
TRPM3-201ENST00000354500 RUFY4Q6ZNE9 571 aa13.38□□□□□ -0.27
TRPM3-201ENST00000354500 GLG1Q92896 1179 aa13.38□□□□□ -0.27
TRPM3-201ENST00000354500 BBOX1O75936 387 aa13.38□□□□□ -0.27
TRPM3-201ENST00000354500 IRX3P78415 501 aaPredicted RBP13.38□□□□□ -0.27
TRPM3-201ENST00000354500 SLFN12Q8IYM2 578 aa13.38□□□□□ -0.27
TRPM3-201ENST00000354500 CAPS2Q9BXY5 557 aa13.38□□□□□ -0.27
TRPM3-201ENST00000354500 NCOA3Q9Y6Q9 1424 aa13.38□□□□□ -0.27
TRPM3-201ENST00000354500 LMTK2Q8IWU2 1503 aa13.38□□□□□ -0.27
TRPM3-201ENST00000354500 RPS6KA4O75676 772 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 ALX1Q15699 326 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 SH2D3AQ9BRG2 576 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 CDHR2Q9BYE9 1310 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 ZBED4O75132 1171 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 GH2P01242 217 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 CLEC4GQ6UXB4 293 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 FAM186BQ8IYM0 893 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 POTEB3A0JP26 581 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 GOLGA8IPA6NC78 632 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 GOLGA8JA6NMD2 632 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 POTECB2RU33 542 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 NCK2O43639 380 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 FXR1P51114 621 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRPM3-201ENST00000354500 CDC37Q16543 378 aaPredicted RBP13.37□□□□□ -0.27
TRPM3-201ENST00000354500 ARL6IP4Q66PJ3 421 aaKnown RBP13.37□□□□□ -0.27
TRPM3-201ENST00000354500 POTEBQ6S5H4 581 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 ABCA9Q8IUA7 1624 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 STMN4Q9H169 189 aaPredicted RBP13.37□□□□□ -0.27
TRPM3-201ENST00000354500 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.37□□□□□ -0.27
TRPM3-201ENST00000354500 TRIM10Q9UDY6 481 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 TSKSQ9UJT2 592 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 PACSIN2Q9UNF0 486 aaPredicted RBP13.37□□□□□ -0.27
TRPM3-201ENST00000354500 PCDHA13Q9Y5I0 950 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 ZBTB7AO95365 584 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 CSF1RP07333 972 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 KRT15P19012 456 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 KLRK1P26718 216 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 STAT3P40763 770 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 KAZNQ674X7 775 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 ENGASEQ8NFI3 743 aa13.37□□□□□ -0.27
TRPM3-201ENST00000354500 ZNF526Q8TF50 670 aaPredicted RBP13.37□□□□□ -0.27
TRPM3-201ENST00000354500 TDRD3Q9H7E2 651 aaKnown RBP13.37□□□□□ -0.27
TRPM3-201ENST00000354500 BMP3P12645 472 aa13.36□□□□□ -0.27
TRPM3-201ENST00000354500 SEPT2Q15019 361 aa13.36□□□□□ -0.27
TRPM3-201ENST00000354500 TERF2Q15554 542 aa13.36□□□□□ -0.27
TRPM3-201ENST00000354500 ARHGEF16Q5VV41 709 aa13.36□□□□□ -0.27
TRPM3-201ENST00000354500 TTBK2Q6IQ55 1244 aa13.36□□□□□ -0.27
TRPM3-201ENST00000354500 B4GALNT4Q76KP1 1039 aa13.36□□□□□ -0.27
TRPM3-201ENST00000354500 SYCE1Q8N0S2 351 aa13.36□□□□□ -0.27
TRPM3-201ENST00000354500 DNAJC17Q9NVM6 304 aaKnown RBP13.36□□□□□ -0.27
TRPM3-201ENST00000354500 LAD1O00515 517 aa13.36□□□□□ -0.27
TRPM3-201ENST00000354500 ATF7P17544 494 aaPredicted RBP13.36□□□□□ -0.27
TRPM3-201ENST00000354500 SLCO1A2P46721 670 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms