RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 L3MBTL4Q8NA19 623 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 PAGR1Q9BTK6 254 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 ZCCHC2Q9C0B9 1178 aaKnown RBP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 CUEDC2Q9H467 287 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 CAAP1Q9H8G2 361 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 ANKIB1Q9P2G1 1089 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 ZNF644Q9H582 1327 aaPredicted RBP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 C10orf71Q711Q0 1435 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 MAGI1Q96QZ7 1491 aaPredicted RBP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 HECW2Q9P2P5 1572 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 TMX2-CTNND1H3BSU7 103 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 WNT10BO00744 389 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 PLD2O14939 933 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 CBFA2T2O43439 604 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 TUSC2O75896 110 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 VIMP08670 466 aaKnown RBP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 RRM1P23921 792 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 TUBP50607 506 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 ATAT1Q5SQI0 421 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 TANGO2Q6ICL3 276 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 SV2BQ7L1I2 683 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 OTOP1Q7RTM1 612 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 HOMER1Q86YM7 354 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 DEFB123Q8N688 67 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 FAM84AQ96KN4 292 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 GRIP2Q9C0E4 1043 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 KCNK12Q9HB15 430 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 RIC8AQ9NPQ8 531 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 LATS2Q9NRM7 1088 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 UBP1Q9NZI7 540 aa2.58□□□□□ -2
SMARCAD1-201ENST00000354268 LUC7L2Q9Y383 392 aaKnown RBP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 AQRO60306 1485 aaKnown RBP eCLIP2.58□□□□□ -22e-6■■■■■ 62.5
SMARCAD1-201ENST00000354268 MED1Q15648 1581 aaPredicted RBP2.58□□□□□ -2
SMARCAD1-201ENST00000354268 GRIN2BQ13224 1484 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 PLEKHH2Q8IVE3 1493 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 MAP3K15Q6ZN16 1313 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 PSDA5PKW4 1024 aaPredicted RBP2.57□□□□□ -2
SMARCAD1-201ENST00000354268 B4E171 279 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 RPS6KA4O75676 772 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 PDIA3P30101 505 aaKnown RBP2.57□□□□□ -2
SMARCAD1-201ENST00000354268 PHKA2P46019 1235 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 SEC24CP53992 1094 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 NR1H2P55055 460 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 USP33Q8TEY7 942 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 ZNF287Q9HBT7 754 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 BLOC1S4Q9NUP1 217 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 TRMT13Q9NUP7 481 aaKnown RBP2.57□□□□□ -2
SMARCAD1-201ENST00000354268 RTEL1Q9NZ71 1219 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 ASAP1Q9ULH1 1129 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 RIPK3Q9Y572 518 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 PSAT1Q9Y617 370 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 SCRIBQ14160 1630 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 ABCA8O94911 1581 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 ROBO2Q9HCK4 1378 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 GOLGA6CA6NDK9 693 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 GOLGA6BA6NDN3 693 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 E9PAM4 449 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 CD4P01730 458 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 POU2F2P09086 479 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 GOLGA6DP0CG33 693 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 ADSSP30520 456 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 ALDH1B1P30837 517 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 RFC4P35249 363 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 ADARP55265 1226 aaKnown RBP2.57□□□□□ -2
SMARCAD1-201ENST00000354268 SH3BP2P78314 561 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 APOBRQ0VD83 1088 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 MAP3K12Q12852 859 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 TRAF1Q13077 416 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 FHL3Q13643 280 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 PPP2R5AQ15172 486 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 ARSIQ5FYB1 569 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 LDLRAP1Q5SW96 308 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 LIPNQ5VXI9 398 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 DCAF15Q66K64 600 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 RBM12BQ8IXT5 1001 aaKnown RBP2.57□□□□□ -2
SMARCAD1-201ENST00000354268 FAM9BQ8IZU0 186 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 MICALL1Q8N3F8 863 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 TMEM199Q8N511 208 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 ZGPATQ8N5A5 531 aaKnown RBP2.57□□□□□ -2
SMARCAD1-201ENST00000354268 CHMP4CQ96CF2 233 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 NUP88Q99567 741 aaPredicted RBP2.57□□□□□ -2
SMARCAD1-201ENST00000354268 PNNQ9H307 717 aaKnown RBP2.57□□□□□ -2
SMARCAD1-201ENST00000354268 POLE4Q9NR33 117 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 GOLGA6AQ9NYA3 693 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 KIAA1468Q9P260 1216 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 RABGEF1Q9UJ41 708 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 SNX9Q9Y5X1 595 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 TK2O00142 265 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 CFBP00751 764 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 GJB1P08034 283 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 COL6A2P12110 1019 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 RHCEP18577 417 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 HNF1BP35680 557 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 YARSP54577 528 aaKnown RBP2.57□□□□□ -2
SMARCAD1-201ENST00000354268 RHDQ02161 417 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 SRSF11Q05519 484 aaKnown RBP2.57□□□□□ -2
SMARCAD1-201ENST00000354268 KCNT1Q5JUK3 1230 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 TSHZ3Q63HK5 1081 aa2.57□□□□□ -2
SMARCAD1-201ENST00000354268 FAM109BQ6ICB4 259 aaPredicted RBP2.57□□□□□ -2
SMARCAD1-201ENST00000354268 PSRC1Q6PGN9 363 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms